BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00015074
         (735 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACX49997.1| cryptochrome 1 [Capsella bursa-pastoris]               137   2e-30
gb|ACX49996.1| cryptochrome 1 [Capsella bursa-pastoris]               137   2e-30
gb|ACX49994.1| cryptochrome 1 [Capsella bursa-pastoris] gi|26076...   136   4e-30
gb|AAB28725.2| flavin-type blue-light photoreceptor [Arabidopsis...   135   7e-30
gb|AAD17364.1| Arabidopsis thaliana flavin-type blue-light photo...   135   7e-30

>gb|ACX49997.1| cryptochrome 1 [Capsella bursa-pastoris]
          Length = 674

 Score =  137 bits (346), Expect = 2e-30
 Identities = 71/127 (55%), Positives = 81/127 (63%)
 Frame = +2

Query: 353 IVWFRRDLRVEDNPALAAAVRAGPVIAVFIWAPEEEGYYHPGRVSRWWLXXXXXXXXXXX 532
           IVWFRRDLRVEDNPALAAAVRAGPVIAVF+WAPEEEG+YHPGRVSRWWL           
Sbjct: 18  IVWFRRDLRVEDNPALAAAVRAGPVIAVFVWAPEEEGHYHPGRVSRWWL----------- 66

Query: 533 XXXXXXXXXXXXXXXXXXXHXXXXXXXXXXXXXTSFITKRSTDSISSLIQVVKDTGATRL 712
                              +             T  ITKRSTDS++SL++VVK TGA+++
Sbjct: 67  ------------------KNSLAQLDSSLRSLGTCLITKRSTDSVTSLLEVVKSTGASQI 108

Query: 713 FFNHLYD 733
           FFNHLYD
Sbjct: 109 FFNHLYD 115


>gb|ACX49996.1| cryptochrome 1 [Capsella bursa-pastoris]
          Length = 660

 Score =  137 bits (346), Expect = 2e-30
 Identities = 71/127 (55%), Positives = 81/127 (63%)
 Frame = +2

Query: 353 IVWFRRDLRVEDNPALAAAVRAGPVIAVFIWAPEEEGYYHPGRVSRWWLXXXXXXXXXXX 532
           IVWFRRDLRVEDNPALAAAVRAGPVIAVF+WAPEEEG+YHPGRVSRWWL           
Sbjct: 18  IVWFRRDLRVEDNPALAAAVRAGPVIAVFVWAPEEEGHYHPGRVSRWWL----------- 66

Query: 533 XXXXXXXXXXXXXXXXXXXHXXXXXXXXXXXXXTSFITKRSTDSISSLIQVVKDTGATRL 712
                              +             T  ITKRSTDS++SL++VVK TGA+++
Sbjct: 67  ------------------KNSLAQLDSSLRSLGTCLITKRSTDSVTSLLEVVKSTGASQI 108

Query: 713 FFNHLYD 733
           FFNHLYD
Sbjct: 109 FFNHLYD 115


>gb|ACX49994.1| cryptochrome 1 [Capsella bursa-pastoris]
           gi|260765929|gb|ACX49995.1| cryptochrome 1 [Capsella
           bursa-pastoris]
          Length = 684

 Score =  136 bits (343), Expect = 4e-30
 Identities = 71/127 (55%), Positives = 80/127 (62%)
 Frame = +2

Query: 353 IVWFRRDLRVEDNPALAAAVRAGPVIAVFIWAPEEEGYYHPGRVSRWWLXXXXXXXXXXX 532
           IVWFRRDLRVEDNPALAAAVRAGPVIAVF+WAPEEEG+YHPGRVSRWWL           
Sbjct: 18  IVWFRRDLRVEDNPALAAAVRAGPVIAVFVWAPEEEGHYHPGRVSRWWL----------- 66

Query: 533 XXXXXXXXXXXXXXXXXXXHXXXXXXXXXXXXXTSFITKRSTDSISSLIQVVKDTGATRL 712
                              +             T  ITKRSTDS++SL+ VVK TGA+++
Sbjct: 67  ------------------KNSLAQLDSSLRSLGTCLITKRSTDSVASLLXVVKSTGASQI 108

Query: 713 FFNHLYD 733
           FFNHLYD
Sbjct: 109 FFNHLYD 115


>gb|AAB28725.2| flavin-type blue-light photoreceptor [Arabidopsis thaliana]
          Length = 556

 Score =  135 bits (341), Expect = 7e-30
 Identities = 70/127 (55%), Positives = 80/127 (62%)
 Frame = +2

Query: 353 IVWFRRDLRVEDNPALAAAVRAGPVIAVFIWAPEEEGYYHPGRVSRWWLXXXXXXXXXXX 532
           IVWFRRDLRVEDNPALAAAVRAGPVIA+F+WAPEEEG+YHPGRVSRWWL           
Sbjct: 15  IVWFRRDLRVEDNPALAAAVRAGPVIALFVWAPEEEGHYHPGRVSRWWL----------- 63

Query: 533 XXXXXXXXXXXXXXXXXXXHXXXXXXXXXXXXXTSFITKRSTDSISSLIQVVKDTGATRL 712
                              +             T  ITKRSTDS++SL+ VVK TGA+++
Sbjct: 64  ------------------KNSLAQLDSSLRSLGTCLITKRSTDSVASLLDVVKSTGASQI 105

Query: 713 FFNHLYD 733
           FFNHLYD
Sbjct: 106 FFNHLYD 112


>gb|AAD17364.1| Arabidopsis thaliana flavin-type blue-light photoreceptor
           (SW:Q43125) (Pfam: PF00875, Score=765.2, E=2.6e-226,
           N=1) [Arabidopsis thaliana]
          Length = 702

 Score =  135 bits (341), Expect = 7e-30
 Identities = 70/127 (55%), Positives = 80/127 (62%)
 Frame = +2

Query: 353 IVWFRRDLRVEDNPALAAAVRAGPVIAVFIWAPEEEGYYHPGRVSRWWLXXXXXXXXXXX 532
           IVWFRRDLRVEDNPALAAAVRAGPVIA+F+WAPEEEG+YHPGRVSRWWL           
Sbjct: 15  IVWFRRDLRVEDNPALAAAVRAGPVIALFVWAPEEEGHYHPGRVSRWWL----------- 63

Query: 533 XXXXXXXXXXXXXXXXXXXHXXXXXXXXXXXXXTSFITKRSTDSISSLIQVVKDTGATRL 712
                              +             T  ITKRSTDS++SL+ VVK TGA+++
Sbjct: 64  ------------------KNSLAQLDSSLRSLGTCLITKRSTDSVASLLDVVKSTGASQI 105

Query: 713 FFNHLYD 733
           FFNHLYD
Sbjct: 106 FFNHLYD 112