BLASTX nr result

ID: Coptis25_contig00015067 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00015067
         (242 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002314324.1| predicted protein [Populus trichocarpa] gi|2...   105   4e-21
ref|XP_002328611.1| predicted protein [Populus trichocarpa] gi|2...   100   2e-19
ref|XP_002519172.1| conserved hypothetical protein [Ricinus comm...    93   3e-17
ref|XP_003534161.1| PREDICTED: uncharacterized protein LOC100775...    92   3e-17
emb|CBI36906.3| unnamed protein product [Vitis vinifera]               91   1e-16

>ref|XP_002314324.1| predicted protein [Populus trichocarpa] gi|222863364|gb|EEF00495.1|
           predicted protein [Populus trichocarpa]
          Length = 397

 Score =  105 bits (262), Expect = 4e-21
 Identities = 49/62 (79%), Positives = 55/62 (88%)
 Frame = -3

Query: 186 DASVKLPLPVFGLASYKFKGSVWTPNGLDERQQASSLLQAAENWLRLLQVDHPDYRFFVS 7
           D S+KLPLP FGLASYKFK S W PNG+ E Q+ASSLL+AA+NWLRLLQV+HPDYRFFVS
Sbjct: 332 DMSLKLPLPTFGLASYKFKVSFWNPNGVYECQKASSLLRAADNWLRLLQVNHPDYRFFVS 391

Query: 6   HN 1
           HN
Sbjct: 392 HN 393


>ref|XP_002328611.1| predicted protein [Populus trichocarpa] gi|222838593|gb|EEE76958.1|
           predicted protein [Populus trichocarpa]
          Length = 315

 Score =  100 bits (248), Expect = 2e-19
 Identities = 45/62 (72%), Positives = 54/62 (87%)
 Frame = -3

Query: 186 DASVKLPLPVFGLASYKFKGSVWTPNGLDERQQASSLLQAAENWLRLLQVDHPDYRFFVS 7
           D S+KLPLP FGLASYKF+ + W PNG+ E Q++ SLL+AA+NWLRLLQV+HPDYRFFVS
Sbjct: 250 DMSLKLPLPTFGLASYKFEVTFWNPNGVYECQKSGSLLKAADNWLRLLQVNHPDYRFFVS 309

Query: 6   HN 1
           HN
Sbjct: 310 HN 311


>ref|XP_002519172.1| conserved hypothetical protein [Ricinus communis]
           gi|223541487|gb|EEF43036.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 416

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 44/62 (70%), Positives = 48/62 (77%)
 Frame = -3

Query: 186 DASVKLPLPVFGLASYKFKGSVWTPNGLDERQQASSLLQAAENWLRLLQVDHPDYRFFVS 7
           D  VKLPL  FGLASYKFK S W PNG  E Q+ +SLL+AA+NWLRLLQV HPDY FF S
Sbjct: 351 DMPVKLPLATFGLASYKFKVSFWNPNGAYECQKVNSLLRAADNWLRLLQVYHPDYMFFAS 410

Query: 6   HN 1
           HN
Sbjct: 411 HN 412


>ref|XP_003534161.1| PREDICTED: uncharacterized protein LOC100775751 [Glycine max]
          Length = 410

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 42/63 (66%), Positives = 51/63 (80%), Gaps = 1/63 (1%)
 Frame = -3

Query: 189 VDASV-KLPLPVFGLASYKFKGSVWTPNGLDERQQASSLLQAAENWLRLLQVDHPDYRFF 13
           +D  V K+ LP F +ASYK KGS+WT NG+ E Q  +SLLQAA+NWLRLLQV+HPDY+FF
Sbjct: 343 IDGGVPKISLPTFAMASYKLKGSIWTQNGVSESQVVNSLLQAADNWLRLLQVNHPDYQFF 402

Query: 12  VSH 4
           VSH
Sbjct: 403 VSH 405


>emb|CBI36906.3| unnamed protein product [Vitis vinifera]
          Length = 331

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 44/63 (69%), Positives = 52/63 (82%)
 Frame = -3

Query: 189 VDASVKLPLPVFGLASYKFKGSVWTPNGLDERQQASSLLQAAENWLRLLQVDHPDYRFFV 10
           VD+  K+ LPVFGLASYK KGS+ TP+G +E QQASSLLQ A NWL+ LQVD PDY+FF+
Sbjct: 265 VDSLPKISLPVFGLASYKLKGSILTPSGNEEFQQASSLLQDAGNWLKRLQVDLPDYQFFL 324

Query: 9   SHN 1
           SHN
Sbjct: 325 SHN 327


Top