BLASTX nr result

ID: Coptis25_contig00015066 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00015066
         (326 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002514192.1| conserved hypothetical protein [Ricinus comm...   196   2e-48
ref|XP_002283321.1| PREDICTED: uncharacterized protein LOC100261...   194   6e-48
emb|CAN61437.1| hypothetical protein VITISV_033770 [Vitis vinife...   194   6e-48
ref|XP_003532468.1| PREDICTED: uncharacterized protein LOC100799...   193   1e-47
ref|XP_003530185.1| PREDICTED: uncharacterized protein LOC100791...   193   1e-47

>ref|XP_002514192.1| conserved hypothetical protein [Ricinus communis]
           gi|223546648|gb|EEF48146.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 460

 Score =  196 bits (497), Expect = 2e-48
 Identities = 91/107 (85%), Positives = 95/107 (88%)
 Frame = -3

Query: 324 GTRKRRKIQTECDLQGGETRWHKTGKTRPVMVNGKQKGCKKILVLYTNFGKNRKPEKTNW 145
           GTRKRRKIQTECDLQGGETRWHKTGKTRPVMVNGKQKGCKKILVLYTNFGKNRKPEKTNW
Sbjct: 122 GTRKRRKIQTECDLQGGETRWHKTGKTRPVMVNGKQKGCKKILVLYTNFGKNRKPEKTNW 181

Query: 144 VMHQYHXXXXXXXXXXXLVVSKIFYQTQPRQCNWSERSVSTGEGSAD 4
           VMHQYH           LVVSKIFYQTQPRQCNW++RS +TGEGS+D
Sbjct: 182 VMHQYHLGQHEEEKEGELVVSKIFYQTQPRQCNWTDRSATTGEGSSD 228


>ref|XP_002283321.1| PREDICTED: uncharacterized protein LOC100261063 [Vitis vinifera]
          Length = 450

 Score =  194 bits (493), Expect = 6e-48
 Identities = 90/107 (84%), Positives = 95/107 (88%)
 Frame = -3

Query: 324 GTRKRRKIQTECDLQGGETRWHKTGKTRPVMVNGKQKGCKKILVLYTNFGKNRKPEKTNW 145
           GTRKRRKIQTECDLQGGETRWHKTGKTRPVMVNGKQKGCKKILVLYTNFGKNRKPEKTNW
Sbjct: 122 GTRKRRKIQTECDLQGGETRWHKTGKTRPVMVNGKQKGCKKILVLYTNFGKNRKPEKTNW 181

Query: 144 VMHQYHXXXXXXXXXXXLVVSKIFYQTQPRQCNWSERSVSTGEGSAD 4
           VMHQYH           LVVSKIFYQTQPRQCNWS+RS +TGEG+++
Sbjct: 182 VMHQYHLGQLEEEKEGELVVSKIFYQTQPRQCNWSDRSATTGEGNSE 228


>emb|CAN61437.1| hypothetical protein VITISV_033770 [Vitis vinifera]
           gi|297738730|emb|CBI27975.3| unnamed protein product
           [Vitis vinifera]
          Length = 454

 Score =  194 bits (493), Expect = 6e-48
 Identities = 90/107 (84%), Positives = 95/107 (88%)
 Frame = -3

Query: 324 GTRKRRKIQTECDLQGGETRWHKTGKTRPVMVNGKQKGCKKILVLYTNFGKNRKPEKTNW 145
           GTRKRRKIQTECDLQGGETRWHKTGKTRPVMVNGKQKGCKKILVLYTNFGKNRKPEKTNW
Sbjct: 122 GTRKRRKIQTECDLQGGETRWHKTGKTRPVMVNGKQKGCKKILVLYTNFGKNRKPEKTNW 181

Query: 144 VMHQYHXXXXXXXXXXXLVVSKIFYQTQPRQCNWSERSVSTGEGSAD 4
           VMHQYH           LVVSKIFYQTQPRQCNWS+RS +TGEG+++
Sbjct: 182 VMHQYHLGQLEEEKEGELVVSKIFYQTQPRQCNWSDRSATTGEGNSE 228


>ref|XP_003532468.1| PREDICTED: uncharacterized protein LOC100799291 [Glycine max]
          Length = 450

 Score =  193 bits (491), Expect = 1e-47
 Identities = 90/108 (83%), Positives = 94/108 (87%)
 Frame = -3

Query: 324 GTRKRRKIQTECDLQGGETRWHKTGKTRPVMVNGKQKGCKKILVLYTNFGKNRKPEKTNW 145
           GTRKRRKIQ ECDLQGGETRWHKTGKTRPVMVNGKQKGCKKILVLYTNFGKNRKPEKTNW
Sbjct: 123 GTRKRRKIQNECDLQGGETRWHKTGKTRPVMVNGKQKGCKKILVLYTNFGKNRKPEKTNW 182

Query: 144 VMHQYHXXXXXXXXXXXLVVSKIFYQTQPRQCNWSERSVSTGEGSADR 1
           VMHQYH           LVVSKIFYQTQPRQCNWS+RS +TGEGS ++
Sbjct: 183 VMHQYHLGQYEEEREGELVVSKIFYQTQPRQCNWSDRSATTGEGSGEQ 230


>ref|XP_003530185.1| PREDICTED: uncharacterized protein LOC100791884 [Glycine max]
          Length = 467

 Score =  193 bits (490), Expect = 1e-47
 Identities = 90/107 (84%), Positives = 93/107 (86%)
 Frame = -3

Query: 324 GTRKRRKIQTECDLQGGETRWHKTGKTRPVMVNGKQKGCKKILVLYTNFGKNRKPEKTNW 145
           GTRKRRKIQ ECDLQGGETRWHKTGKTRPVMVNGKQKGCKKILVLYTNFGKNRKPEKTNW
Sbjct: 124 GTRKRRKIQNECDLQGGETRWHKTGKTRPVMVNGKQKGCKKILVLYTNFGKNRKPEKTNW 183

Query: 144 VMHQYHXXXXXXXXXXXLVVSKIFYQTQPRQCNWSERSVSTGEGSAD 4
           VMHQYH           LVVSKIFYQTQPRQCNWS+RS +TGEGS +
Sbjct: 184 VMHQYHLGQHEEEKEGELVVSKIFYQTQPRQCNWSDRSATTGEGSGE 230


Top