BLASTX nr result

ID: Coptis25_contig00015049 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00015049
         (257 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002318903.1| cc-nbs-lrr resistance protein [Populus trich...    82   5e-14
ref|XP_002318909.1| cc-nbs-lrr resistance protein [Populus trich...    79   4e-13
ref|XP_002318904.1| nbs-lrr resistance protein [Populus trichoca...    78   7e-13
ref|XP_003633531.1| PREDICTED: putative disease resistance prote...    77   1e-12
ref|XP_002269779.2| PREDICTED: putative disease resistance prote...    77   1e-12

>ref|XP_002318903.1| cc-nbs-lrr resistance protein [Populus trichocarpa]
           gi|222859576|gb|EEE97123.1| cc-nbs-lrr resistance
           protein [Populus trichocarpa]
          Length = 906

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 43/85 (50%), Positives = 52/85 (61%)
 Frame = +3

Query: 3   LSIVGTGGFGKTTLAQLVYNEGTITTTFELKIWVCVSKPFDXXXXXXXXXXXXTGEKLPE 182
           +S+VG GG GKTTLAQL +N+  +T  FE KIWVCVS+PFD             G   P 
Sbjct: 179 ISLVGLGGMGKTTLAQLAFNDAEVTAHFEKKIWVCVSEPFDEVRIAKAIIEQLEGS--PT 236

Query: 183 NIVGWDLLHQHLCNSVKGKRFLLVL 257
           N+V    L Q +  S+KGKRFLLVL
Sbjct: 237 NLVELQSLLQRVSESIKGKRFLLVL 261


>ref|XP_002318909.1| cc-nbs-lrr resistance protein [Populus trichocarpa]
           gi|222859582|gb|EEE97129.1| cc-nbs-lrr resistance
           protein [Populus trichocarpa]
          Length = 746

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 42/85 (49%), Positives = 52/85 (61%)
 Frame = +3

Query: 3   LSIVGTGGFGKTTLAQLVYNEGTITTTFELKIWVCVSKPFDXXXXXXXXXXXXTGEKLPE 182
           +S+VG GG GKTTLAQL +N+  +TT FE KIWVCVS+PFD             G     
Sbjct: 200 ISLVGLGGIGKTTLAQLAFNDAEVTTHFEKKIWVCVSEPFDQVRIAKAILEQLEGR--AP 257

Query: 183 NIVGWDLLHQHLCNSVKGKRFLLVL 257
           ++V    L Q +  S+KGKRFLLVL
Sbjct: 258 DLVELQSLLQRVSESIKGKRFLLVL 282


>ref|XP_002318904.1| nbs-lrr resistance protein [Populus trichocarpa]
           gi|222859577|gb|EEE97124.1| nbs-lrr resistance protein
           [Populus trichocarpa]
          Length = 799

 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 42/85 (49%), Positives = 50/85 (58%)
 Frame = +3

Query: 3   LSIVGTGGFGKTTLAQLVYNEGTITTTFELKIWVCVSKPFDXXXXXXXXXXXXTGEKLPE 182
           +S+VG GG GKTTLAQL +N+  +T  FE KIWVCVS PFD             G     
Sbjct: 109 ISLVGLGGIGKTTLAQLAFNDSEVTAHFEKKIWVCVSDPFDEVKIAKAILEQLEGS--AP 166

Query: 183 NIVGWDLLHQHLCNSVKGKRFLLVL 257
           N+V    L Q +  S+KGKRFLLVL
Sbjct: 167 NLVELQSLLQRVSESIKGKRFLLVL 191


>ref|XP_003633531.1| PREDICTED: putative disease resistance protein RGA3-like [Vitis
           vinifera]
          Length = 961

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 41/85 (48%), Positives = 53/85 (62%)
 Frame = +3

Query: 3   LSIVGTGGFGKTTLAQLVYNEGTITTTFELKIWVCVSKPFDXXXXXXXXXXXXTGEKLPE 182
           + IVG GG GKTTLAQLVYN+  +T  FELK+WVCVS  FD            TG+    
Sbjct: 90  IPIVGMGGLGKTTLAQLVYNDEKVTKHFELKMWVCVSDDFDVRRATKSVLDSATGKNF-- 147

Query: 183 NIVGWDLLHQHLCNSVKGKRFLLVL 257
           +++  D+L   L + +KGKR+LLVL
Sbjct: 148 DLMDLDILQSKLRDILKGKRYLLVL 172


>ref|XP_002269779.2| PREDICTED: putative disease resistance protein RGA3-like [Vitis
           vinifera]
          Length = 1091

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 41/85 (48%), Positives = 53/85 (62%)
 Frame = +3

Query: 3   LSIVGTGGFGKTTLAQLVYNEGTITTTFELKIWVCVSKPFDXXXXXXXXXXXXTGEKLPE 182
           + IVG GG GKTTLAQLVYN+  +T  FELK+WVCVS  FD            TG+    
Sbjct: 183 IPIVGMGGLGKTTLAQLVYNDEKVTKHFELKMWVCVSDDFDVRRATKSVLDSATGKNF-- 240

Query: 183 NIVGWDLLHQHLCNSVKGKRFLLVL 257
           +++  D+L   L + +KGKR+LLVL
Sbjct: 241 DLMDLDILQSKLRDILKGKRYLLVL 265


Top