BLASTX nr result

ID: Coptis25_contig00015033 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00015033
         (470 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFP55551.1| mutator-like transposase [Rosa rugosa]                  95   7e-18
gb|ABB46584.1| transposon protein, putative, Mutator sub-class, ...    88   6e-16
ref|NP_001064021.1| Os10g0104700 [Oryza sativa Japonica Group] g...    88   6e-16
gb|AAK00423.2| Putative maize transposon MuDR mudrA-like protein...    88   6e-16
gb|AAC02734.1| putative Mutator-like transposase [Arabidopsis th...    88   6e-16

>gb|AFP55551.1| mutator-like transposase [Rosa rugosa]
          Length = 721

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 48/129 (37%), Positives = 75/129 (58%)
 Frame = -2

Query: 454 RYGEMCSSLAECFNSWIDKERHRPITSMLDEIRMKMMKMASERRMKCKN*KTILCPKMEV 275
           R+GEM ++LAE FN+W+   +  PI  + D IR+K M   + R+       + LCP +E 
Sbjct: 508 RFGEMTNNLAESFNNWVLPLKSLPILDINDGIRVKSMASIAARKQDAHEWFSELCPVIEK 567

Query: 274 KLAERIEEARFVTVARSNEHVFQVVTEKHEYRVDLLSRYYTCNNWGIDGFPCRHAIASIY 95
           KL + +E  R   V+RS+ +V++V  +K+   V+L SR+ +C  W + GFPC HA+  I 
Sbjct: 568 KLKDNLEVGRHWRVSRSDTYVYEVHCQKYNSMVNLESRFCSCGEWQLYGFPCSHALVVIQ 627

Query: 94  CKGNLVYSY 68
             G+  Y Y
Sbjct: 628 QHGSSPYLY 636


>gb|ABB46584.1| transposon protein, putative, Mutator sub-class, expressed [Oryza
            sativa Japonica Group]
          Length = 818

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 48/142 (33%), Positives = 73/142 (51%)
 Frame = -2

Query: 454  RYGEMCSSLAECFNSWIDKERHRPITSMLDEIRMKMMKMASERRMKCKN*KTILCPKMEV 275
            RY    S++ + FN+WI  ++   I  M+D +RMK+M++   RR  CK+    L P ME 
Sbjct: 610  RYDHFSSNIVDAFNNWIPTKKEGSIVLMIDSLRMKIMEVIEARRESCKSWSGPLTPSMEF 669

Query: 274  KLAERIEEARFVTVARSNEHVFQVVTEKHEYRVDLLSRYYTCNNWGIDGFPCRHAIASIY 95
            K+ + + +A  +TV  S+E VF+ V     Y V+L +   TC  W + G PC HA+A   
Sbjct: 670  KVQDEMSKAGKLTVLCSSETVFE-VRGSAIYVVNLANWECTCRRWQLSGLPCMHAVAVFN 728

Query: 94   CKGNLVYSYYTLKLHFSPFRLA 29
              G   Y Y +       + LA
Sbjct: 729  RVGRSFYDYCSKFFRIESYHLA 750


>ref|NP_001064021.1| Os10g0104700 [Oryza sativa Japonica Group]
            gi|113638630|dbj|BAF25935.1| Os10g0104700, partial [Oryza
            sativa Japonica Group]
          Length = 826

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 48/142 (33%), Positives = 73/142 (51%)
 Frame = -2

Query: 454  RYGEMCSSLAECFNSWIDKERHRPITSMLDEIRMKMMKMASERRMKCKN*KTILCPKMEV 275
            RY    S++ + FN+WI  ++   I  M+D +RMK+M++   RR  CK+    L P ME 
Sbjct: 618  RYDHFSSNIVDAFNNWIPTKKEGSIVLMIDSLRMKIMEVIEARRESCKSWSGPLTPSMEF 677

Query: 274  KLAERIEEARFVTVARSNEHVFQVVTEKHEYRVDLLSRYYTCNNWGIDGFPCRHAIASIY 95
            K+ + + +A  +TV  S+E VF+ V     Y V+L +   TC  W + G PC HA+A   
Sbjct: 678  KVQDEMSKAGKLTVLCSSETVFE-VRGSAIYVVNLANWECTCRRWQLSGLPCMHAVAVFN 736

Query: 94   CKGNLVYSYYTLKLHFSPFRLA 29
              G   Y Y +       + LA
Sbjct: 737  RVGRSFYDYCSKFFRIESYHLA 758


>gb|AAK00423.2| Putative maize transposon MuDR mudrA-like protein [Oryza sativa
            Japonica Group] gi|125573769|gb|EAZ15053.1| hypothetical
            protein OsJ_30463 [Oryza sativa Japonica Group]
          Length = 937

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 48/142 (33%), Positives = 73/142 (51%)
 Frame = -2

Query: 454  RYGEMCSSLAECFNSWIDKERHRPITSMLDEIRMKMMKMASERRMKCKN*KTILCPKMEV 275
            RY    S++ + FN+WI  ++   I  M+D +RMK+M++   RR  CK+    L P ME 
Sbjct: 729  RYDHFSSNIVDAFNNWIPTKKEGSIVLMIDSLRMKIMEVIEARRESCKSWSGPLTPSMEF 788

Query: 274  KLAERIEEARFVTVARSNEHVFQVVTEKHEYRVDLLSRYYTCNNWGIDGFPCRHAIASIY 95
            K+ + + +A  +TV  S+E VF+ V     Y V+L +   TC  W + G PC HA+A   
Sbjct: 789  KVQDEMSKAGKLTVLCSSETVFE-VRGSAIYVVNLANWECTCRRWQLSGLPCMHAVAVFN 847

Query: 94   CKGNLVYSYYTLKLHFSPFRLA 29
              G   Y Y +       + LA
Sbjct: 848  RVGRSFYDYCSKFFRIESYHLA 869


>gb|AAC02734.1| putative Mutator-like transposase [Arabidopsis thaliana]
           gi|20198324|gb|AAM15523.1| putative Mutator-like
           transposase [Arabidopsis thaliana]
          Length = 754

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 46/136 (33%), Positives = 76/136 (55%), Gaps = 4/136 (2%)
 Frame = -2

Query: 454 RYGEMCSSLAECFNSWIDKERHRPITSMLDEIRMKMMKMASERRMKCKN*KTILCPKMEV 275
           R+G + ++++E  NSW+      PI  ML+ IR ++M + +ERR        +L P  E 
Sbjct: 533 RFGHLTANVSESLNSWVQDASGLPIIQMLESIRRQLMTLFNERRETSMQWSGMLVPSAER 592

Query: 274 KLAERIEEARFVTVARSNEHVFQVVTEKHEYRVDLLSRYYTCNNWGIDGFPCRHAIASIY 95
            + E IEE R   V ++NE  F+V+T + ++ VD+  R   C  W + G PC HA+A++ 
Sbjct: 593 HVLEAIEECRLYPVHKANEAQFEVMTSEGKWIVDIRCRTCYCRGWELYGLPCSHAVAALL 652

Query: 94  -CKGNL---VYSYYTL 59
            C+ N+     SY+T+
Sbjct: 653 ACRQNVYRFTESYFTV 668


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