BLASTX nr result

ID: Coptis25_contig00015029 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00015029
         (1197 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN63047.1| hypothetical protein VITISV_044031 [Vitis vinifera]   332   9e-89
ref|XP_002519130.1| conserved hypothetical protein [Ricinus comm...   323   5e-86
ref|XP_002313078.1| predicted protein [Populus trichocarpa] gi|2...   313   4e-83
ref|XP_003541116.1| PREDICTED: transmembrane protein 45B-like [G...   311   2e-82
ref|XP_003606844.1| Transmembrane protein 45B [Medicago truncatu...   305   1e-80

>emb|CAN63047.1| hypothetical protein VITISV_044031 [Vitis vinifera]
          Length = 294

 Score =  332 bits (852), Expect = 9e-89
 Identities = 166/277 (59%), Positives = 188/277 (67%)
 Frame = +2

Query: 86  MGTFVGHMVPGCALILLGLWHTFNTIKAYYLKGKANFHSRFWYPFNDFSFKFKYXXXXXX 265
           MGTFVGH+VPG AL LLGLWHT NTI+AY LKG  NF  +FWYPFN      KY      
Sbjct: 1   MGTFVGHLVPGLALTLLGLWHTINTIRAYALKGSTNFTVKFWYPFNSPFPNLKYLELIFI 60

Query: 266 XXXXXXXXXXQVLDFYHFEFSFMLDSLEHATMFLHLAIYAGIALVVELTHIPEVFMWFIG 445
                     QVLDF     SF LD+ EHA+MFLHLAI+AG  L  ELTH  E      G
Sbjct: 61  LFFSIFAIFMQVLDFPFIRLSFELDNFEHASMFLHLAIFAGFTLSAELTHSLEGLSGVSG 120

Query: 446 LLAASVFSQELFLLHFHSTDHVGLEGHYHWLLQLIVVVSFVSALAMISFPXXXXXXXXXX 625
           +LAASVF QELFLLHFHSTDHVGLEGHYHWLLQLIV+VS V+ALA  SFP          
Sbjct: 121 ILAASVFGQELFLLHFHSTDHVGLEGHYHWLLQLIVLVSLVAALAATSFPTSFPAALVLS 180

Query: 626 XXXXFQGCWFLNMGFILWVPRFVPKGCMVSFVEGGNDMHGAVTCGTNDAFLRARALANLQ 805
               FQGCWF+NMGF+LWVP FVPKGC V      + MHGAV CG++DA LRARALAN+Q
Sbjct: 181 TAVVFQGCWFMNMGFMLWVPEFVPKGCKVQLTSSSDSMHGAVACGSHDADLRARALANMQ 240

Query: 806 FSLILAAIMILTSSLCLTLAGKYIARRQSIEYERIHS 916
           FS IL+ I++   SLCL L GK  ++  SIEYE++HS
Sbjct: 241 FSWILSGILMFVGSLCLKLVGKCXSKAGSIEYEQLHS 277


>ref|XP_002519130.1| conserved hypothetical protein [Ricinus communis]
           gi|223541793|gb|EEF43341.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 294

 Score =  323 bits (828), Expect = 5e-86
 Identities = 158/279 (56%), Positives = 192/279 (68%), Gaps = 1/279 (0%)
 Frame = +2

Query: 86  MGTFVGHMVPGCALILLGLWHTFNTIKAYYLKGKANFHSRFWYPFNDFSFKFKYXXXXXX 265
           MGTFVGH VP  ALILLGLWHT NT++AY LKG  +F+++FWYPF     + K+      
Sbjct: 9   MGTFVGHFVPALALILLGLWHTINTVRAYCLKGSTSFNAKFWYPFYGTLSRLKHFELIFV 68

Query: 266 XXXXXXXXXXQVLDFYHFEFSFMLDSLEHATMFLHLAIYAGIALVVELTHIPEVFMWFIG 445
                     Q+LDF    ++F LD+ EHATMFLHLAI++G  L  E+TH  E+     G
Sbjct: 69  LSFSAFAIIVQILDFPLLRYAFKLDNFEHATMFLHLAIFSGFTLFTEITHSSEILSGVSG 128

Query: 446 LLAASVFSQELFLLHFHSTDHVGLEGHYHWLLQLIVVVSFVSALAMISFPXXXXXXXXXX 625
           +LA+SVF QELFLLHFHSTDHVGLEGHYHWLLQLIV VS VSALA  +FP          
Sbjct: 129 ILASSVFGQELFLLHFHSTDHVGLEGHYHWLLQLIVFVSLVSALAATNFPSSFPAALVLS 188

Query: 626 XXXXFQGCWFLNMGFILWVPRFVPKGCMVSFVEGGN-DMHGAVTCGTNDAFLRARALANL 802
               FQGCWF+NMGF+LWVP  +P+GC++   E     MHGAVTCG+ DA LRARALANL
Sbjct: 189 ISVVFQGCWFMNMGFMLWVPNLIPEGCVMQLSEANTYGMHGAVTCGSIDADLRARALANL 248

Query: 803 QFSLILAAIMILTSSLCLTLAGKYIARRQSIEYERIHSR 919
           QFS ILAAI++ T   CL  AG+  +R QSIEYE++H++
Sbjct: 249 QFSWILAAILLFTGGACLKSAGRCTSRVQSIEYEQLHNK 287


>ref|XP_002313078.1| predicted protein [Populus trichocarpa] gi|222849486|gb|EEE87033.1|
           predicted protein [Populus trichocarpa]
          Length = 293

 Score =  313 bits (803), Expect = 4e-83
 Identities = 158/280 (56%), Positives = 189/280 (67%), Gaps = 1/280 (0%)
 Frame = +2

Query: 86  MGTFVGHMVPGCALILLGLWHTFNTIKAYYLKGKANFHSRFWYPFNDFSFKFKYXXXXXX 265
           MGTFVGH+VPG AL LLGLWHT NTI+A+  KG  NF  +FWYPF     + K+      
Sbjct: 1   MGTFVGHIVPGLALTLLGLWHTVNTIRAFCNKGCTNFTVKFWYPFYGPVSRLKHLELIFI 60

Query: 266 XXXXXXXXXXQVLDFYHFEFSFMLDSLEHATMFLHLAIYAGIALVVELTHIPEVFMWFIG 445
                     Q+LDF    FSF LDS EHA++FLHLAI+AG  L  E++   ++     G
Sbjct: 61  LSFSVLAIFMQLLDFPSLRFSFKLDSFEHASIFLHLAIFAGFTLSAEISQSSDILSGVSG 120

Query: 446 LLAASVFSQELFLLHFHSTDHVGLEGHYHWLLQLIVVVSFVSALAMISFPXXXXXXXXXX 625
           +LAA VF QELFLLHFHSTDHVGLEGHYHWLLQLIV VS ++ALA  +FP          
Sbjct: 121 ILAAFVFGQELFLLHFHSTDHVGLEGHYHWLLQLIVFVSLLAALAATNFPNSFPAALVLS 180

Query: 626 XXXXFQGCWFLNMGFILWVPRFVPKGCMVSFVEGG-NDMHGAVTCGTNDAFLRARALANL 802
               FQGCWF+NMGF+LW P F+P+GC++ F E   +DMHGAVTCG+  A LRA ALANL
Sbjct: 181 ISVVFQGCWFMNMGFMLWFPDFIPEGCVMQFAEASIDDMHGAVTCGSLAAELRATALANL 240

Query: 803 QFSLILAAIMILTSSLCLTLAGKYIARRQSIEYERIHSRG 922
           QFS ILA I++LT  +CL LA K   R QS EYE++HSRG
Sbjct: 241 QFSWILAGILLLTGCMCLKLARKCTPRSQSTEYEQLHSRG 280


>ref|XP_003541116.1| PREDICTED: transmembrane protein 45B-like [Glycine max]
          Length = 295

 Score =  311 bits (798), Expect = 2e-82
 Identities = 152/281 (54%), Positives = 195/281 (69%), Gaps = 1/281 (0%)
 Frame = +2

Query: 86  MGTFVGHMVPGCALILLGLWHTFNTIKAYYLKGKANFHSRFWYPFNDFSFKFKYXXXXXX 265
           MG+FVGH V G AL LLGLW+T +TI++Y +KG ANF  RFWY FN    + K+      
Sbjct: 1   MGSFVGHAVQGSALALLGLWNTIHTIRSYLVKGPANFTVRFWYQFNTPQSRLKHLELVSI 60

Query: 266 XXXXXXXXXXQVLDFYHFEFSFMLDSLEHATMFLHLAIYAGIALVVELTHIPEVFMWFIG 445
                     Q+LDF HF ++F LD+ EHATMF+HLA++AG +L  ELT   ++F  F+G
Sbjct: 61  LSFSVLAIFMQILDFPHFHYAFKLDNFEHATMFIHLALFAGFSLSTELTDSLDLFSGFVG 120

Query: 446 LLAASVFSQELFLLHFHSTDHVGLEGHYHWLLQLIVVVSFVSALAMISFPXXXXXXXXXX 625
           +LA+SVFSQELFLLHFHSTDHVGLEGHYHWLLQLIV+VS V+ALA   FP          
Sbjct: 121 ILASSVFSQELFLLHFHSTDHVGLEGHYHWLLQLIVLVSLVAALAATIFPNNFNAALVLS 180

Query: 626 XXXXFQGCWFLNMGFILWVPRFVPKGCMVSFVE-GGNDMHGAVTCGTNDAFLRARALANL 802
               FQGCWF+NMGF+LW+P FVP+GC+++  +  G+++ GAVTCG+ +A  RAR LANL
Sbjct: 181 ISVIFQGCWFINMGFMLWIPAFVPEGCVMNLAKASGHEIIGAVTCGSKEADFRARGLANL 240

Query: 803 QFSLILAAIMILTSSLCLTLAGKYIARRQSIEYERIHSRGA 925
           QFS IL++I+I    +CL LA K       +EYERI ++GA
Sbjct: 241 QFSWILSSILIFAGIICLKLARKCTITTNRLEYERIQTKGA 281


>ref|XP_003606844.1| Transmembrane protein 45B [Medicago truncatula]
           gi|355507899|gb|AES89041.1| Transmembrane protein 45B
           [Medicago truncatula]
          Length = 293

 Score =  305 bits (781), Expect = 1e-80
 Identities = 150/286 (52%), Positives = 193/286 (67%), Gaps = 1/286 (0%)
 Frame = +2

Query: 86  MGTFVGHMVPGCALILLGLWHTFNTIKAYYLKGKANFHSRFWYPFNDFSFKFKYXXXXXX 265
           M  F+ H+V G AL  LGLWH  NTIK+Y +KG +NF  RFWY FN   FKFK+      
Sbjct: 1   MDLFIAHLVQGLALTFLGLWHIINTIKSYLVKGPSNFTIRFWYHFNTPHFKFKHLELVSI 60

Query: 266 XXXXXXXXXXQVLDFYHFEFSFMLDSLEHATMFLHLAIYAGIALVVELTHIPEVFMWFIG 445
                     Q+LDF HF ++F LD+ EHATMF+HLA++AG +L+ ELT   E+F  F+ 
Sbjct: 61  LSFSILAILMQILDFPHFHYAFKLDNFEHATMFIHLALFAGFSLLTELTDSLELFSGFVA 120

Query: 446 LLAASVFSQELFLLHFHSTDHVGLEGHYHWLLQLIVVVSFVSALAMISFPXXXXXXXXXX 625
           +L +SVFSQELFLLHFHSTDHVG EGHYHWLLQLIV VS +++LA   FP          
Sbjct: 121 ILVSSVFSQELFLLHFHSTDHVGPEGHYHWLLQLIVFVSLIASLAAAVFPNSFNAAIVLS 180

Query: 626 XXXXFQGCWFLNMGFILWVPRFVPKGCMVSFV-EGGNDMHGAVTCGTNDAFLRARALANL 802
               FQGCWF+NMGF+L++P FVP+GC+++   E  +++HGAVTCG+ +A  RA+ LANL
Sbjct: 181 ISLIFQGCWFINMGFMLYIPTFVPEGCVMNLARESASEIHGAVTCGSKEADFRAKGLANL 240

Query: 803 QFSLILAAIMILTSSLCLTLAGKYIARRQSIEYERIHSRGADANQI 940
           QFS IL+AIMI    +CL LA K+      +EYERI S+ AD+  +
Sbjct: 241 QFSWILSAIMIFAGIVCLKLAKKFTI-VDRLEYERIQSKVADSTVV 285


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