BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00015014
         (1220 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK49467.1| unknown [Lotus japonicus]                              364   3e-98
ref|XP_002275293.1| PREDICTED: ribosomal RNA small subunit methy...   356   8e-96
emb|CBI30112.3| unnamed protein product [Vitis vinifera]              352   8e-95
ref|XP_002531546.1| Nucleolar essential protein, putative [Ricin...   352   1e-94
ref|XP_002273311.1| PREDICTED: ribosomal RNA small subunit methy...   352   1e-94

>gb|AFK49467.1| unknown [Lotus japonicus]
          Length = 272

 Score =  364 bits (934), Expect = 3e-98
 Identities = 186/274 (67%), Positives = 216/274 (78%), Gaps = 1/274 (0%)
 Frame = +2

Query: 122 MVRPFAVKGSRKRKKRDESYKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNQLAGIPIIP 301
           M RPF +KG   RK++D+  K                             ++L GIPI+P
Sbjct: 1   MTRPFGMKG---RKRKDKEAKYDREEDEDEQVQPKRPMLQNAEVAAANEEDELVGIPIMP 57

Query: 302 NDQKSKS-GVIFILERASLEVAKVGKTYQILNSDDHANFLRKHNKNPGDYRPDIAHQALL 478
           +D KS +  VIFILERASLEVAKVGKTYQ+LNSDDHANFLRK+NKNPGDYRPDI HQALL
Sbjct: 58  SDHKSDNPNVIFILERASLEVAKVGKTYQLLNSDDHANFLRKNNKNPGDYRPDITHQALL 117

Query: 479 AILDSPLNKAGRLRALYVKTEKGVLFEVKPHVRMPRTFKRFCGVMLQLLQKLSISATSKR 658
           +ILDSPLNKAGRL+A+Y+KTEKGVL EVKP+VR+PRTFKRF GVMLQLLQKLSISA  K 
Sbjct: 118 SILDSPLNKAGRLQAVYIKTEKGVLIEVKPYVRIPRTFKRFSGVMLQLLQKLSISAAGKH 177

Query: 659 EKLLRVIKNPVTQHLPVNSRKIGLSYSSEKLVQLQDYVAAASNDVNLVFVVGAMAHGKID 838
           EKLLR IKNPVTQ+LPVNSRKIGLS+SSEKLV + DYV+   +D+NLVFVVGAMAHGK++
Sbjct: 178 EKLLRTIKNPVTQYLPVNSRKIGLSFSSEKLVNMNDYVSTVPSDMNLVFVVGAMAHGKVE 237

Query: 839 KEYTDDFISVSGYPLSAACCIARICNTLELKWRI 940
            +YT+D+I+VSGYPLSAA CI RICN LE KW+I
Sbjct: 238 TDYTEDYIAVSGYPLSAAYCITRICNALEAKWKI 271


>ref|XP_002275293.1| PREDICTED: ribosomal RNA small subunit methyltransferase nep-1
           [Vitis vinifera] gi|296085405|emb|CBI29137.3| unnamed
           protein product [Vitis vinifera]
          Length = 271

 Score =  356 bits (913), Expect = 8e-96
 Identities = 182/273 (66%), Positives = 214/273 (78%)
 Frame = +2

Query: 122 MVRPFAVKGSRKRKKRDESYKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNQLAGIPIIP 301
           MVRP+A+KG  KRKKR+E+Y                               +L GIP++P
Sbjct: 1   MVRPYAIKG-HKRKKREENYDREEVEQLLEEETAATATQDEKKAEEVTL--ELPGIPLVP 57

Query: 302 NDQKSKSGVIFILERASLEVAKVGKTYQILNSDDHANFLRKHNKNPGDYRPDIAHQALLA 481
           ++  +K+GV FILERA LEVAKVGK+YQ+L+S+DHANFLRK+NKNP +YRPDI HQALL 
Sbjct: 58  SNLNNKTGVTFILERACLEVAKVGKSYQLLSSEDHANFLRKNNKNPAEYRPDILHQALLT 117

Query: 482 ILDSPLNKAGRLRALYVKTEKGVLFEVKPHVRMPRTFKRFCGVMLQLLQKLSISATSKRE 661
           ILDSPLNKAGRLRA+YV+TEKGVLFEVKPHVR+PRT+KRF G+MLQLLQKLSI+A  KRE
Sbjct: 118 ILDSPLNKAGRLRAVYVRTEKGVLFEVKPHVRIPRTYKRFSGIMLQLLQKLSITAVGKRE 177

Query: 662 KLLRVIKNPVTQHLPVNSRKIGLSYSSEKLVQLQDYVAAASNDVNLVFVVGAMAHGKIDK 841
           KLLRVIKNPVTQ+LPVNSRKIG SYSSEK + ++DYVAA S+DV+LVFVVGAMAHGKI  
Sbjct: 178 KLLRVIKNPVTQYLPVNSRKIGFSYSSEKSIPMRDYVAAVSDDVDLVFVVGAMAHGKISN 237

Query: 842 EYTDDFISVSGYPLSAACCIARICNTLELKWRI 940
           +YTDDFI++SGYPLSAA C   IC  L  KW I
Sbjct: 238 DYTDDFIAISGYPLSAAWCTYLICGALMQKWNI 270


>emb|CBI30112.3| unnamed protein product [Vitis vinifera]
          Length = 319

 Score =  352 bits (904), Expect = 8e-95
 Identities = 180/275 (65%), Positives = 213/275 (77%)
 Frame = +2

Query: 116 KKMVRPFAVKGSRKRKKRDESYKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNQLAGIPI 295
           ++MVRP+ +KG  KRK+R+E+Y                              ++L GIP+
Sbjct: 47  QEMVRPYTIKG-HKRKRREENYDKEEVKQLLEEETAATATQDENKAEEIT--HELPGIPL 103

Query: 296 IPNDQKSKSGVIFILERASLEVAKVGKTYQILNSDDHANFLRKHNKNPGDYRPDIAHQAL 475
           +P    +K+GV FILERA LEVAKVGK+YQ+L+S+DHANFLRK+NKNP DYRPDI HQAL
Sbjct: 104 VPFKSNNKTGVTFILERACLEVAKVGKSYQLLSSEDHANFLRKNNKNPADYRPDILHQAL 163

Query: 476 LAILDSPLNKAGRLRALYVKTEKGVLFEVKPHVRMPRTFKRFCGVMLQLLQKLSISATSK 655
           L ILDSPLNKAGRLRA+YV+TEKGVLFEVKPHVR+PRT+KRF G+MLQLLQKLSI+A  K
Sbjct: 164 LTILDSPLNKAGRLRAVYVRTEKGVLFEVKPHVRIPRTYKRFSGIMLQLLQKLSITAVGK 223

Query: 656 REKLLRVIKNPVTQHLPVNSRKIGLSYSSEKLVQLQDYVAAASNDVNLVFVVGAMAHGKI 835
           REKLLRVIKNPVTQ+LPVNSRKIG SYSSEK   ++DYVAA S+DV+LVFVVGAMAHGKI
Sbjct: 224 REKLLRVIKNPVTQYLPVNSRKIGFSYSSEKSTPIRDYVAAVSDDVDLVFVVGAMAHGKI 283

Query: 836 DKEYTDDFISVSGYPLSAACCIARICNTLELKWRI 940
             +YTDDFI++SGYPLSA+ C   IC  L  KW I
Sbjct: 284 SNDYTDDFIAISGYPLSASWCTYLICGALMQKWNI 318


>ref|XP_002531546.1| Nucleolar essential protein, putative [Ricinus communis]
           gi|223528837|gb|EEF30840.1| Nucleolar essential protein,
           putative [Ricinus communis]
          Length = 294

 Score =  352 bits (903), Expect = 1e-94
 Identities = 186/294 (63%), Positives = 218/294 (74%), Gaps = 21/294 (7%)
 Frame = +2

Query: 122 MVRPFAVKGSRKRKKRDESYKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXN--------- 274
           MVRP+ +KG  KRKKR+E Y                              +         
Sbjct: 1   MVRPYGIKGP-KRKKREEKYDKVGDEVDEQTEESAKRAMLSKTEMPLENCSKKTEQEEEG 59

Query: 275 -----------QLAGIPIIPNDQKSKS-GVIFILERASLEVAKVGKTYQILNSDDHANFL 418
                      ++ GIPI+P+D K+K  GVIF+LE+ASLEVAKVGKTYQILNSDDHANFL
Sbjct: 60  DEGEELEGEVQEMEGIPIMPSDSKTKKPGVIFVLEKASLEVAKVGKTYQILNSDDHANFL 119

Query: 419 RKHNKNPGDYRPDIAHQALLAILDSPLNKAGRLRALYVKTEKGVLFEVKPHVRMPRTFKR 598
           RK+NKNP DYRPDI +QALL+ILDSPLNKAGRL+A+YVKTEKGVLFEVKP+VR+PRT+KR
Sbjct: 120 RKNNKNPADYRPDIVYQALLSILDSPLNKAGRLQAVYVKTEKGVLFEVKPYVRIPRTYKR 179

Query: 599 FCGVMLQLLQKLSISATSKREKLLRVIKNPVTQHLPVNSRKIGLSYSSEKLVQLQDYVAA 778
           F G+MLQLLQKLSI+A  KREKLLRVIKNPVTQ+LPVNSRKIG SYSS+KLV++ +YVAA
Sbjct: 180 FTGIMLQLLQKLSITAAGKREKLLRVIKNPVTQYLPVNSRKIGFSYSSDKLVKMSNYVAA 239

Query: 779 ASNDVNLVFVVGAMAHGKIDKEYTDDFISVSGYPLSAACCIARICNTLELKWRI 940
             +DV LVFVVGAMAHGKID +Y DDFI++SGYPLSAA CI+RIC  L  KW +
Sbjct: 240 VDDDVGLVFVVGAMAHGKIDCDYIDDFIAISGYPLSAAWCISRICEALADKWGV 293


>ref|XP_002273311.1| PREDICTED: ribosomal RNA small subunit methyltransferase nep-1
           [Vitis vinifera]
          Length = 271

 Score =  352 bits (902), Expect = 1e-94
 Identities = 180/273 (65%), Positives = 211/273 (77%)
 Frame = +2

Query: 122 MVRPFAVKGSRKRKKRDESYKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNQLAGIPIIP 301
           MVRP+ +KG  KRK+R+E+Y                              ++L GIP++P
Sbjct: 1   MVRPYTIKG-HKRKRREENYDKEEVKQLLEEETAATATQDENKAEEIT--HELPGIPLVP 57

Query: 302 NDQKSKSGVIFILERASLEVAKVGKTYQILNSDDHANFLRKHNKNPGDYRPDIAHQALLA 481
               +K+GV FILERA LEVAKVGK+YQ+L+S+DHANFLRK+NKNP DYRPDI HQALL 
Sbjct: 58  FKSNNKTGVTFILERACLEVAKVGKSYQLLSSEDHANFLRKNNKNPADYRPDILHQALLT 117

Query: 482 ILDSPLNKAGRLRALYVKTEKGVLFEVKPHVRMPRTFKRFCGVMLQLLQKLSISATSKRE 661
           ILDSPLNKAGRLRA+YV+TEKGVLFEVKPHVR+PRT+KRF G+MLQLLQKLSI+A  KRE
Sbjct: 118 ILDSPLNKAGRLRAVYVRTEKGVLFEVKPHVRIPRTYKRFSGIMLQLLQKLSITAVGKRE 177

Query: 662 KLLRVIKNPVTQHLPVNSRKIGLSYSSEKLVQLQDYVAAASNDVNLVFVVGAMAHGKIDK 841
           KLLRVIKNPVTQ+LPVNSRKIG SYSSEK   ++DYVAA S+DV+LVFVVGAMAHGKI  
Sbjct: 178 KLLRVIKNPVTQYLPVNSRKIGFSYSSEKSTPIRDYVAAVSDDVDLVFVVGAMAHGKISN 237

Query: 842 EYTDDFISVSGYPLSAACCIARICNTLELKWRI 940
           +YTDDFI++SGYPLSA+ C   IC  L  KW I
Sbjct: 238 DYTDDFIAISGYPLSASWCTYLICGALMQKWNI 270