BLASTX nr result

ID: Coptis25_contig00015008 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00015008
         (218 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004146109.1| PREDICTED: 26S proteasome non-ATPase regulat...    79   4e-13
ref|XP_003631488.1| PREDICTED: 26S proteasome non-ATPase regulat...    79   5e-13
emb|CBI33797.3| unnamed protein product [Vitis vinifera]               79   5e-13
ref|XP_002275168.1| PREDICTED: 26S proteasome non-ATPase regulat...    79   5e-13
ref|NP_680721.2| 26S proteasome regulatory subunit N9 [Arabidops...    78   6e-13

>ref|XP_004146109.1| PREDICTED: 26S proteasome non-ATPase regulatory subunit 13-like
           [Cucumis sativus] gi|449509507|ref|XP_004163608.1|
           PREDICTED: 26S proteasome non-ATPase regulatory subunit
           13-like [Cucumis sativus]
          Length = 386

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 34/46 (73%), Positives = 40/46 (86%)
 Frame = -1

Query: 140 MAGLHYLDSQRESHPELAEWYTELADLYERKLWHQLTLKLDQFISL 3
           MA L YLD+ R SHPELAEWY  LADLY++KLWHQLTLKL+QF++L
Sbjct: 1   MAALQYLDTLRNSHPELAEWYNTLADLYQKKLWHQLTLKLEQFVAL 46


>ref|XP_003631488.1| PREDICTED: 26S proteasome non-ATPase regulatory subunit 13-like
           isoform 2 [Vitis vinifera]
          Length = 400

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 34/46 (73%), Positives = 40/46 (86%)
 Frame = -1

Query: 140 MAGLHYLDSQRESHPELAEWYTELADLYERKLWHQLTLKLDQFISL 3
           MA L YL+S R +HPELAEWY  LADLY+RKLWHQLTLKL+QF++L
Sbjct: 1   MAALQYLESLRAAHPELAEWYNSLADLYQRKLWHQLTLKLEQFVAL 46


>emb|CBI33797.3| unnamed protein product [Vitis vinifera]
          Length = 267

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 34/46 (73%), Positives = 40/46 (86%)
 Frame = -1

Query: 140 MAGLHYLDSQRESHPELAEWYTELADLYERKLWHQLTLKLDQFISL 3
           MA L YL+S R +HPELAEWY  LADLY+RKLWHQLTLKL+QF++L
Sbjct: 1   MAALQYLESLRAAHPELAEWYNSLADLYQRKLWHQLTLKLEQFVAL 46


>ref|XP_002275168.1| PREDICTED: 26S proteasome non-ATPase regulatory subunit 13-like
           isoform 1 [Vitis vinifera]
          Length = 386

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 34/46 (73%), Positives = 40/46 (86%)
 Frame = -1

Query: 140 MAGLHYLDSQRESHPELAEWYTELADLYERKLWHQLTLKLDQFISL 3
           MA L YL+S R +HPELAEWY  LADLY+RKLWHQLTLKL+QF++L
Sbjct: 1   MAALQYLESLRAAHPELAEWYNSLADLYQRKLWHQLTLKLEQFVAL 46


>ref|NP_680721.2| 26S proteasome regulatory subunit N9 [Arabidopsis thaliana]
           gi|26450594|dbj|BAC42409.1| unknown protein [Arabidopsis
           thaliana] gi|32700038|gb|AAP86669.1| 26S proteasome
           subunit RPN9b [Arabidopsis thaliana]
           gi|332658724|gb|AEE84124.1| 26S proteasome regulatory
           subunit N9 [Arabidopsis thaliana]
          Length = 386

 Score = 78.2 bits (191), Expect = 6e-13
 Identities = 33/46 (71%), Positives = 40/46 (86%)
 Frame = -1

Query: 140 MAGLHYLDSQRESHPELAEWYTELADLYERKLWHQLTLKLDQFISL 3
           MA L YL+SQ+ +HPEL EWY  LADLY++KLWHQLTLKL+QFI+L
Sbjct: 1   MAALQYLESQKNAHPELGEWYNSLADLYQKKLWHQLTLKLEQFIAL 46


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