BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00014985
         (1357 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002518953.1| ubiquitin-protein ligase, putative [Ricinus ...   219   1e-54
ref|XP_002277627.2| PREDICTED: uncharacterized protein LOC100266...   215   2e-53
ref|XP_002317039.1| predicted protein [Populus trichocarpa] gi|1...   207   4e-51
ref|XP_002880184.1| hypothetical protein ARALYDRAFT_483690 [Arab...   199   1e-48
ref|NP_566045.1| RING/U-box domain-containing protein [Arabidops...   198   2e-48

>ref|XP_002518953.1| ubiquitin-protein ligase, putative [Ricinus communis]
            gi|223541940|gb|EEF43486.1| ubiquitin-protein ligase,
            putative [Ricinus communis]
          Length = 247

 Score =  219 bits (559), Expect = 1e-54
 Identities = 113/210 (53%), Positives = 134/210 (63%), Gaps = 6/210 (2%)
 Frame = +3

Query: 525  EPKLNVFTITSSTEAVQVTSAVS------SPKKASLSRNGSGNLECRVCQQQAEEALIDL 686
            EP  +V T+ + +  +Q+  +        SPKK SL+RN S + +CRVCQQ+ EE LI+L
Sbjct: 42   EPNPSVLTVNADSHVIQIAPSKEDLPPGDSPKKGSLTRNESSHDQCRVCQQEKEEILINL 101

Query: 687  GCHCRGGLAKAHRSCIDTWFLSRGSNKCEICQQVAINVPPPETQPSRNYWVWRVDPAFRG 866
            GC C+GGLAKAHRSCIDTWF +RGSNKCEICQ+VA+NV PPE+QPS NYWVWRVDP FR 
Sbjct: 102  GCKCKGGLAKAHRSCIDTWFHTRGSNKCEICQEVAVNVSPPESQPSTNYWVWRVDPTFR- 160

Query: 867  PSTTPERERGCYSPLWVAFXXXXXXXXXXXXXXXXXXXXALPVNXXXXXXXXXXXXTALR 1046
                 + ERGC+SPLWVAF                    ALPVN            TALR
Sbjct: 161  ---PRDPERGCFSPLWVAFSILIGGLLLDVLISITLGVSALPVNIIIGVIVVLGLGTALR 217

Query: 1047 LALECCHELSLRRAVQIPNTNVTLGPLGYH 1136
            LALE CHE S RR VQ  ++NV   PLGYH
Sbjct: 218  LALEFCHEWSFRRVVQRVDSNV---PLGYH 244


>ref|XP_002277627.2| PREDICTED: uncharacterized protein LOC100266798 [Vitis vinifera]
            gi|297742479|emb|CBI34628.3| unnamed protein product
            [Vitis vinifera]
          Length = 235

 Score =  215 bits (547), Expect = 2e-53
 Identities = 111/207 (53%), Positives = 130/207 (62%), Gaps = 3/207 (1%)
 Frame = +3

Query: 534  LNVFTITSSTEAVQVTSAVS---SPKKASLSRNGSGNLECRVCQQQAEEALIDLGCHCRG 704
            L    +++    VQV  +     SPKK  LSR  S + +CRVCQQ+ EE LIDLGC CRG
Sbjct: 29   LTTILVSNGDSLVQVVVSDGDQLSPKKPHLSRTPSSHDQCRVCQQEKEEDLIDLGCQCRG 88

Query: 705  GLAKAHRSCIDTWFLSRGSNKCEICQQVAINVPPPETQPSRNYWVWRVDPAFRGPSTTPE 884
            GLAK+HR+CIDTWF ++GSNKCEICQQVA NV PPE+QPS NYWVWRVDP FRG +   E
Sbjct: 89   GLAKSHRTCIDTWFHTKGSNKCEICQQVASNVSPPESQPSANYWVWRVDPNFRGSNIAQE 148

Query: 885  RERGCYSPLWVAFXXXXXXXXXXXXXXXXXXXXALPVNXXXXXXXXXXXXTALRLALECC 1064
            + RGC+ PLWVA                     ALPVN            TA+RLALE C
Sbjct: 149  QARGCFKPLWVALSILIGGLLLDVLISIVLGVSALPVNIIIGVIVVLGLGTAIRLALEFC 208

Query: 1065 HELSLRRAVQIPNTNVTLGPLGYHPTV 1145
            HE SLRR  Q  +TNVT   LGY+PT+
Sbjct: 209  HEWSLRRVSQRVDTNVT---LGYYPTL 232


>ref|XP_002317039.1| predicted protein [Populus trichocarpa] gi|118484049|gb|ABK93910.1|
            unknown [Populus trichocarpa] gi|222860104|gb|EEE97651.1|
            predicted protein [Populus trichocarpa]
          Length = 253

 Score =  207 bits (528), Expect = 4e-51
 Identities = 118/264 (44%), Positives = 145/264 (54%), Gaps = 1/264 (0%)
 Frame = +3

Query: 351  VDISKIDKQGVVGEGGSSIGDFGNNGAQTVVTVMISNSELGNHVVAAXXXXXXXXXXXEP 530
            VD+ K D   V+ + G +    GN+    V+ +++SN E                     
Sbjct: 23   VDLEKQDNSKVLTQEGGNGVLSGNSDYSPVIAIVVSNGES-------------------- 62

Query: 531  KLNVFTITSSTEAVQVTSAVSSPKKASLSRNGSGNLECRVCQQQAEEALIDLGCHCRGGL 710
                  + +S E +    +V  P+K SLSR  S + +CRVCQQ+ EE LIDLGC C+GGL
Sbjct: 63   -----PVAASKEELH---SVDFPRKGSLSRTSSSHEQCRVCQQEKEEVLIDLGCKCKGGL 114

Query: 711  AKAHRSCIDTWFLSRGSNKCEICQQVAINVPPPETQP-SRNYWVWRVDPAFRGPSTTPER 887
            AKAHR+CIDTWF +RGSNKCEICQ VA+NV PPE+QP   NYWVWR+DP FR      +R
Sbjct: 115  AKAHRTCIDTWFSTRGSNKCEICQAVAVNVSPPESQPIQANYWVWRIDPNFR----PRDR 170

Query: 888  ERGCYSPLWVAFXXXXXXXXXXXXXXXXXXXXALPVNXXXXXXXXXXXXTALRLALECCH 1067
            +RGC+SPLWVAF                    ALPVN            TALRLALE CH
Sbjct: 171  DRGCFSPLWVAFSILIGGLLLDVLISITLGVSALPVNIIIGVIVVLGLGTALRLALEFCH 230

Query: 1068 ELSLRRAVQIPNTNVTLGPLGYHP 1139
            E S RRAVQ  + N      GYHP
Sbjct: 231  EWSFRRAVQRADANEN---HGYHP 251


>ref|XP_002880184.1| hypothetical protein ARALYDRAFT_483690 [Arabidopsis lyrata subsp.
            lyrata] gi|297326023|gb|EFH56443.1| hypothetical protein
            ARALYDRAFT_483690 [Arabidopsis lyrata subsp. lyrata]
          Length = 240

 Score =  199 bits (506), Expect = 1e-48
 Identities = 96/186 (51%), Positives = 118/186 (63%)
 Frame = +3

Query: 534  LNVFTITSSTEAVQVTSAVSSPKKASLSRNGSGNLECRVCQQQAEEALIDLGCHCRGGLA 713
            L +      +   ++ + +   K+ SLSRNGS + +CRVC Q+ EE LI+LGC CRGGLA
Sbjct: 38   LTIVVCNGDSSREELVAQIPPKKEVSLSRNGSSHEQCRVCLQEKEEVLIELGCQCRGGLA 97

Query: 714  KAHRSCIDTWFLSRGSNKCEICQQVAINVPPPETQPSRNYWVWRVDPAFRGPSTTPERER 893
            KAHRSCID WF ++GSN+CEICQ VA+N+ PPETQP+ NYWVWR+DP++R      ERER
Sbjct: 98   KAHRSCIDAWFRTKGSNQCEICQVVAVNITPPETQPTTNYWVWRIDPSYR----QEERER 153

Query: 894  GCYSPLWVAFXXXXXXXXXXXXXXXXXXXXALPVNXXXXXXXXXXXXTALRLALECCHEL 1073
            GC+SPLWVAF                    ALPVN            TALRL LE C+E 
Sbjct: 154  GCFSPLWVAFSILIGGLMLDVLISITLGVSALPVNIIIGVIVVLGLGTALRLTLEFCYEW 213

Query: 1074 SLRRAV 1091
            SLRRAV
Sbjct: 214  SLRRAV 219


>ref|NP_566045.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
            gi|2979545|gb|AAC06154.1| expressed protein [Arabidopsis
            thaliana] gi|27311551|gb|AAO00741.1| Unknown protein
            [Arabidopsis thaliana] gi|30023706|gb|AAP13386.1|
            At2g45530 [Arabidopsis thaliana]
            gi|330255472|gb|AEC10566.1| RING/U-box domain-containing
            protein [Arabidopsis thaliana]
          Length = 240

 Score =  198 bits (504), Expect = 2e-48
 Identities = 97/186 (52%), Positives = 116/186 (62%)
 Frame = +3

Query: 534  LNVFTITSSTEAVQVTSAVSSPKKASLSRNGSGNLECRVCQQQAEEALIDLGCHCRGGLA 713
            L +      +   ++   +   K+ SLSRNGS + +CRVC Q  EE LI+LGC CRGGLA
Sbjct: 38   LTIVVCNGDSSREELVGQIPPEKEVSLSRNGSSHEQCRVCLQDKEEVLIELGCQCRGGLA 97

Query: 714  KAHRSCIDTWFLSRGSNKCEICQQVAINVPPPETQPSRNYWVWRVDPAFRGPSTTPERER 893
            KAHRSCID WF ++GSN+CEICQ VA+NV PPETQP+ NYWVWR+DP++R      ERER
Sbjct: 98   KAHRSCIDAWFRTKGSNQCEICQVVAVNVTPPETQPTTNYWVWRIDPSYR----QEERER 153

Query: 894  GCYSPLWVAFXXXXXXXXXXXXXXXXXXXXALPVNXXXXXXXXXXXXTALRLALECCHEL 1073
            GC+SPLWVAF                    ALPVN            TALRL LE C+E 
Sbjct: 154  GCFSPLWVAFSILIGGLMLDVLISITLGVSALPVNIIIGVIVVLGLGTALRLTLEFCYEW 213

Query: 1074 SLRRAV 1091
            SLRRAV
Sbjct: 214  SLRRAV 219