BLASTX nr result

ID: Coptis25_contig00014981 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00014981
         (658 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002874074.1| predicted protein [Arabidopsis lyrata subsp....    68   1e-09
ref|XP_002532192.1| conserved hypothetical protein [Ricinus comm...    68   1e-09
ref|NP_197646.1| uncharacterized protein [Arabidopsis thaliana] ...    68   2e-09
ref|XP_002332079.1| predicted protein [Populus trichocarpa] gi|2...    63   4e-08
ref|XP_002874075.1| hypothetical protein ARALYDRAFT_489113 [Arab...    63   6e-08

>ref|XP_002874074.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297319911|gb|EFH50333.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 439

 Score = 68.2 bits (165), Expect = 1e-09
 Identities = 39/124 (31%), Positives = 70/124 (56%)
 Frame = +3

Query: 285 QIILENAGMDLSQGVNYKVPKTMYTINLNRYEPTAVSIGPHHRDKEHEHPHVTEMVKKSY 464
           +++ E+AG +     N ++P+++  INL  YEP  VSIGP+H  K  +H  +T+  K+ +
Sbjct: 20  KLLRESAGSESC--CNVRIPQSLARINLKAYEPKIVSIGPYHHGK--DHLKMTQQHKRRF 75

Query: 465 VAALLGRPKQRKTSLTQIIKAMRKKEYEFKISYGYHKGKAHLTNSDECVKMMILDACFIL 644
           +   + + +++     ++IKA+   E   + SY    G     +S + V+MM+LD CFIL
Sbjct: 76  LKFFVAKMEEKGIDPQELIKAVSSLEGVIRGSYSEDLG----LDSQKLVEMMVLDGCFIL 131

Query: 645 ELLY 656
            L +
Sbjct: 132 TLFF 135


>ref|XP_002532192.1| conserved hypothetical protein [Ricinus communis]
           gi|223528124|gb|EEF30195.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 461

 Score = 68.2 bits (165), Expect = 1e-09
 Identities = 40/107 (37%), Positives = 61/107 (57%)
 Frame = +3

Query: 333 YKVPKTMYTINLNRYEPTAVSIGPHHRDKEHEHPHVTEMVKKSYVAALLGRPKQRKTSLT 512
           ++VPK++  IN   Y+P  VSIGP+H    ++   + E  K  ++ A+L R K +  SL 
Sbjct: 59  FRVPKSLAQINEKAYQPHIVSIGPYHHG--NDQFQMIEEHKWRFLGAVLTRTKAKDISLD 116

Query: 513 QIIKAMRKKEYEFKISYGYHKGKAHLTNSDECVKMMILDACFILELL 653
              KA+  KE E +  Y  + G     +S + ++MMILD CFI+ELL
Sbjct: 117 DFFKAIAPKEEEIRECYSENIG----YSSHQLIEMMILDGCFIIELL 159


>ref|NP_197646.1| uncharacterized protein [Arabidopsis thaliana]
           gi|9758660|dbj|BAB09126.1| unnamed protein product
           [Arabidopsis thaliana] gi|45825141|gb|AAS77478.1|
           At5g22540 [Arabidopsis thaliana]
           gi|110741358|dbj|BAF02229.1| hypothetical protein
           [Arabidopsis thaliana] gi|332005655|gb|AED93038.1|
           uncharacterized protein [Arabidopsis thaliana]
          Length = 440

 Score = 67.8 bits (164), Expect = 2e-09
 Identities = 40/124 (32%), Positives = 71/124 (57%)
 Frame = +3

Query: 285 QIILENAGMDLSQGVNYKVPKTMYTINLNRYEPTAVSIGPHHRDKEHEHPHVTEMVKKSY 464
           +++ E+AG +L   V  ++P+++  INL  YEP  VSIGP+H  K  EH  +T+  K+ +
Sbjct: 20  KLLRESAGSELCCIV--RIPQSLARINLKAYEPKIVSIGPYHHGK--EHLKMTQQHKRRF 75

Query: 465 VAALLGRPKQRKTSLTQIIKAMRKKEYEFKISYGYHKGKAHLTNSDECVKMMILDACFIL 644
           +   + + +++     +++KA+   E   + SY    G     +S+  V+MM+LD CFIL
Sbjct: 76  LKFFVAKMEEKGFVPQELVKAVSSLEGVIRGSYSEDLG----LDSENLVQMMVLDGCFIL 131

Query: 645 ELLY 656
            L +
Sbjct: 132 TLFF 135


>ref|XP_002332079.1| predicted protein [Populus trichocarpa] gi|222831965|gb|EEE70442.1|
           predicted protein [Populus trichocarpa]
          Length = 434

 Score = 63.2 bits (152), Expect = 4e-08
 Identities = 43/123 (34%), Positives = 64/123 (52%)
 Frame = +3

Query: 285 QIILENAGMDLSQGVNYKVPKTMYTINLNRYEPTAVSIGPHHRDKEHEHPHVTEMVKKSY 464
           Q+ L+N   + S    +KVP+    +N   YEP  VSIGP+HR K  +   + E  KK Y
Sbjct: 12  QMSLQNLSTNQSTCSIFKVPRGQRFVNERAYEPEIVSIGPYHRGK--DDLKMMEEYKKHY 69

Query: 465 VAALLGRPKQRKTSLTQIIKAMRKKEYEFKISYGYHKGKAHLTNSDECVKMMILDACFIL 644
           +   L R  + + SLT  + AMR  E + +  Y     +      D  V+M++LD CFI+
Sbjct: 70  LQKFLQR--RPENSLTSYVAAMRGLEAQARRYY----DQTVSLGEDAFVEMLLLDGCFIV 123

Query: 645 ELL 653
           EL+
Sbjct: 124 ELI 126


>ref|XP_002874075.1| hypothetical protein ARALYDRAFT_489113 [Arabidopsis lyrata subsp.
           lyrata] gi|297319912|gb|EFH50334.1| hypothetical protein
           ARALYDRAFT_489113 [Arabidopsis lyrata subsp. lyrata]
          Length = 490

 Score = 62.8 bits (151), Expect = 6e-08
 Identities = 32/106 (30%), Positives = 55/106 (51%)
 Frame = +3

Query: 333 YKVPKTMYTINLNRYEPTAVSIGPHHRDKEHEHPHVTEMVKKSYVAALLGRPKQRKTSLT 512
           Y++P T+  +N   Y P  VSIGP+H   + +H  + E  KK Y+   + + K    +L+
Sbjct: 47  YRIPHTLERVNDKAYAPKIVSIGPYHHSSDKQHLKMIEEHKKRYLEIFVSKTKDNGVNLS 106

Query: 513 QIIKAMRKKEYEFKISYGYHKGKAHLTNSDECVKMMILDACFILEL 650
            ++  +   E + + SY  +       +  + +K+MILD CFIL L
Sbjct: 107 HLVDVVSGLEQKIRDSYSENLE----FSRQKLIKVMILDGCFILML 148


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