BLASTX nr result

ID: Coptis25_contig00014980 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00014980
         (1051 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283606.1| PREDICTED: peptidyl-tRNA hydrolase, mitochon...   349   7e-94
ref|XP_004144094.1| PREDICTED: peptidyl-tRNA hydrolase, mitochon...   339   8e-91
ref|NP_001239948.1| uncharacterized protein LOC100808506 [Glycin...   337   2e-90
ref|XP_004159345.1| PREDICTED: peptidyl-tRNA hydrolase, mitochon...   336   5e-90
ref|XP_004144076.1| PREDICTED: peptidyl-tRNA hydrolase, mitochon...   336   6e-90

>ref|XP_002283606.1| PREDICTED: peptidyl-tRNA hydrolase, mitochondrial [Vitis vinifera]
           gi|297746470|emb|CBI16526.3| unnamed protein product
           [Vitis vinifera]
          Length = 217

 Score =  349 bits (895), Expect = 7e-94
 Identities = 167/215 (77%), Positives = 187/215 (86%)
 Frame = +3

Query: 147 SRRCFYTTTTTSPLPWLFVGLGNPGEKYQGTRHNVGFDMIDVLAKSHGISMDRVHCKAIF 326
           SRR F    T SP PWLFVGLGNPG+KY+GTRHNVGF+MI+  A+S GI MD VHCKAIF
Sbjct: 6   SRRLF---CTASPRPWLFVGLGNPGDKYKGTRHNVGFEMINAFAESQGIPMDTVHCKAIF 62

Query: 327 GQGLISDVPVFLAKPQTYMNLSGESAGPLAAYYKLPLSRIVAFFDDMNLPCGVLRLQDKG 506
           GQG +  VPVFLAKPQTYMNLSGESAGPLAAYYKLPL+R+V F DDM+LPCGVLRL  KG
Sbjct: 63  GQGFVDAVPVFLAKPQTYMNLSGESAGPLAAYYKLPLNRVVVFHDDMSLPCGVLRLHHKG 122

Query: 507 GNGRHKGVRSLIHHFRGNSEFARLRIGIGRPPGQMDPKAFLLQKFNATARERIDVGLQEG 686
           G+G H G++S+I+HFRGN EF RLRIGIG+PPGQMDPKAFLLQKF+ATARERID  LQEG
Sbjct: 123 GHGNHNGLKSVIYHFRGNREFPRLRIGIGKPPGQMDPKAFLLQKFSATARERIDAALQEG 182

Query: 687 VGALKLLASRGLTESARCFNKEQKYKHIRVQTLET 791
           VG LKLL+S+GLTESARCFN EQKYKHIRVQ ++T
Sbjct: 183 VGVLKLLSSKGLTESARCFNTEQKYKHIRVQNMQT 217


>ref|XP_004144094.1| PREDICTED: peptidyl-tRNA hydrolase, mitochondrial-like [Cucumis
           sativus]
          Length = 218

 Score =  339 bits (869), Expect = 8e-91
 Identities = 161/205 (78%), Positives = 181/205 (88%)
 Frame = +3

Query: 171 TTTSPLPWLFVGLGNPGEKYQGTRHNVGFDMIDVLAKSHGISMDRVHCKAIFGQGLISDV 350
           T  S  PWLFVGLGNPGEK++GTRHNVGF+MIDV A+S GISM+RVHCKA+FG+G + D+
Sbjct: 12  TAISSRPWLFVGLGNPGEKFRGTRHNVGFEMIDVFAESIGISMNRVHCKAVFGEGFVGDI 71

Query: 351 PVFLAKPQTYMNLSGESAGPLAAYYKLPLSRIVAFFDDMNLPCGVLRLQDKGGNGRHKGV 530
           PVFLAKPQTYMNLSGESAGPLAAYYKLPL+R++ F DDMNLPCGVLRLQ  GG+G H G+
Sbjct: 72  PVFLAKPQTYMNLSGESAGPLAAYYKLPLNRVLVFHDDMNLPCGVLRLQHNGGHGYHNGL 131

Query: 531 RSLIHHFRGNSEFARLRIGIGRPPGQMDPKAFLLQKFNATARERIDVGLQEGVGALKLLA 710
           +S+I+HFRGN EFARLRIGIGRPPGQMDPKAFLLQKFN TA+ERID  LQEGVGALKLL 
Sbjct: 132 KSVIYHFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNNTAQERIDTALQEGVGALKLLL 191

Query: 711 SRGLTESARCFNKEQKYKHIRVQTL 785
           S  L ESAR FN EQKYKHIR+QT+
Sbjct: 192 SHSLFESARHFNHEQKYKHIRLQTM 216


>ref|NP_001239948.1| uncharacterized protein LOC100808506 [Glycine max]
           gi|255645293|gb|ACU23143.1| unknown [Glycine max]
          Length = 218

 Score =  337 bits (865), Expect = 2e-90
 Identities = 161/214 (75%), Positives = 185/214 (86%)
 Frame = +3

Query: 144 ISRRCFYTTTTTSPLPWLFVGLGNPGEKYQGTRHNVGFDMIDVLAKSHGISMDRVHCKAI 323
           +SRRCF T T   P PWLFVGLGNPG+K++GTRHNVGF+MID  A+S GI MD VH KAI
Sbjct: 5   LSRRCFCTFT---PRPWLFVGLGNPGDKFKGTRHNVGFEMIDAFAESQGIPMDTVHSKAI 61

Query: 324 FGQGLISDVPVFLAKPQTYMNLSGESAGPLAAYYKLPLSRIVAFFDDMNLPCGVLRLQDK 503
           FG+G + +VPVFLAKPQTYMNLSGES GPLAAYYKLPL++++ F DDMNLPCGVLRL DK
Sbjct: 62  FGKGFVGEVPVFLAKPQTYMNLSGESTGPLAAYYKLPLNQVLVFHDDMNLPCGVLRLHDK 121

Query: 504 GGNGRHKGVRSLIHHFRGNSEFARLRIGIGRPPGQMDPKAFLLQKFNATARERIDVGLQE 683
           GG+G HKG++S+I++FRGN EF RLRIGIG PPGQMDPKAFLLQKFN TAR+RID  LQE
Sbjct: 122 GGHGSHKGLKSVIYNFRGNREFPRLRIGIGSPPGQMDPKAFLLQKFNVTARQRIDEALQE 181

Query: 684 GVGALKLLASRGLTESARCFNKEQKYKHIRVQTL 785
           G+ ALKLL S+GLTESA+ FNKEQKYKH+RVQ L
Sbjct: 182 GIDALKLLLSKGLTESAKRFNKEQKYKHLRVQNL 215


>ref|XP_004159345.1| PREDICTED: peptidyl-tRNA hydrolase, mitochondrial-like [Cucumis
           sativus]
          Length = 218

 Score =  336 bits (862), Expect = 5e-90
 Identities = 160/205 (78%), Positives = 182/205 (88%)
 Frame = +3

Query: 171 TTTSPLPWLFVGLGNPGEKYQGTRHNVGFDMIDVLAKSHGISMDRVHCKAIFGQGLISDV 350
           T  S  PWLF+GLGNPGEK++GTRHNVGF+MIDV A+S GISM+RVHCKA+FG+G + DV
Sbjct: 12  TAISSRPWLFMGLGNPGEKFRGTRHNVGFEMIDVFAESIGISMNRVHCKAVFGEGFVGDV 71

Query: 351 PVFLAKPQTYMNLSGESAGPLAAYYKLPLSRIVAFFDDMNLPCGVLRLQDKGGNGRHKGV 530
           PVFLAKPQTYMNLSGESAGPLAAYYKLPL+R++ F DDMNLPCGVLRLQ  GG+  HKG+
Sbjct: 72  PVFLAKPQTYMNLSGESAGPLAAYYKLPLNRVLVFHDDMNLPCGVLRLQHNGGHDYHKGL 131

Query: 531 RSLIHHFRGNSEFARLRIGIGRPPGQMDPKAFLLQKFNATARERIDVGLQEGVGALKLLA 710
           +S+I+HFRGN EFARLRIGIGRPPGQMD KAFLLQKFN TA+ERID  LQEGVGALKLL 
Sbjct: 132 KSVIYHFRGNREFARLRIGIGRPPGQMDSKAFLLQKFNNTAQERIDTALQEGVGALKLLL 191

Query: 711 SRGLTESARCFNKEQKYKHIRVQTL 785
           S GL+ESAR FN +QKYKHIR+QT+
Sbjct: 192 SHGLSESARHFNHKQKYKHIRLQTM 216


>ref|XP_004144076.1| PREDICTED: peptidyl-tRNA hydrolase, mitochondrial-like [Cucumis
           sativus]
          Length = 218

 Score =  336 bits (861), Expect = 6e-90
 Identities = 159/205 (77%), Positives = 182/205 (88%)
 Frame = +3

Query: 171 TTTSPLPWLFVGLGNPGEKYQGTRHNVGFDMIDVLAKSHGISMDRVHCKAIFGQGLISDV 350
           T  S  PWLF+GLGNPGEK++GTRHNVGF+MIDV A+S GISM+RVHCKA+FG+G + D+
Sbjct: 12  TAISSRPWLFMGLGNPGEKFRGTRHNVGFEMIDVFAESIGISMNRVHCKAVFGEGFVGDI 71

Query: 351 PVFLAKPQTYMNLSGESAGPLAAYYKLPLSRIVAFFDDMNLPCGVLRLQDKGGNGRHKGV 530
           PVFLAKPQTYMNLSGESAGPLAAYYKLPL+R++ F DDMNLPCGVLRLQ  GG+  HKG+
Sbjct: 72  PVFLAKPQTYMNLSGESAGPLAAYYKLPLNRVLVFHDDMNLPCGVLRLQHNGGHDYHKGL 131

Query: 531 RSLIHHFRGNSEFARLRIGIGRPPGQMDPKAFLLQKFNATARERIDVGLQEGVGALKLLA 710
           +S+I+HFRGN EFARLRIGIGRPPGQMD KAFLLQKFN TA+ERID  LQEGVGALKLL 
Sbjct: 132 KSVIYHFRGNREFARLRIGIGRPPGQMDSKAFLLQKFNNTAQERIDTALQEGVGALKLLL 191

Query: 711 SRGLTESARCFNKEQKYKHIRVQTL 785
           S GL+ESAR FN +QKYKHIR+QT+
Sbjct: 192 SHGLSESARHFNHKQKYKHIRLQTM 216


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