BLASTX nr result

ID: Coptis25_contig00014978 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00014978
         (1112 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278744.2| PREDICTED: proliferation-associated protein ...    75   4e-24
gb|AAF91445.1|AF281652_1 putative DNA binding protein [Atriplex ...    75   3e-23
gb|AEY75257.1| putative DNA binding protein [Atriplex canescens]       75   3e-23
ref|XP_003568643.1| PREDICTED: proliferation-associated protein ...    70   1e-22
gb|ABJ97690.1| EBP1 [Solanum tuberosum]                                70   2e-22

>ref|XP_002278744.2| PREDICTED: proliferation-associated protein 2G4-like [Vitis
           vinifera] gi|297745872|emb|CBI15928.3| unnamed protein
           product [Vitis vinifera]
          Length = 391

 Score = 75.1 bits (183), Expect(2) = 4e-24
 Identities = 38/49 (77%), Positives = 42/49 (85%), Gaps = 4/49 (8%)
 Frame = -1

Query: 137 SPLASDDSVLVAGDILKIDMGCH----IAVVAHTHVLLDGPVTGRQADV 3
           SPL+SD+++L AGDILKIDMGCH    IAVVAHTHVL DGPVTGR ADV
Sbjct: 92  SPLSSDETLLEAGDILKIDMGCHIDGFIAVVAHTHVLQDGPVTGRAADV 140



 Score = 63.5 bits (153), Expect(2) = 4e-24
 Identities = 27/29 (93%), Positives = 29/29 (100%)
 Frame = -2

Query: 223 NVYKNVKKKIERGVAFPTCLSVNNTLCHF 137
           NVYKNVKKKIERGVAFPTC+SVNNT+CHF
Sbjct: 63  NVYKNVKKKIERGVAFPTCISVNNTVCHF 91


>gb|AAF91445.1|AF281652_1 putative DNA binding protein [Atriplex hortensis]
          Length = 397

 Score = 74.7 bits (182), Expect(2) = 3e-23
 Identities = 37/49 (75%), Positives = 42/49 (85%), Gaps = 4/49 (8%)
 Frame = -1

Query: 137 SPLASDDSVLVAGDILKIDMGCH----IAVVAHTHVLLDGPVTGRQADV 3
           SPLASDDSVL  GD++KIDMGCH    IAVVAHTHV+ +GPVTGR+ADV
Sbjct: 92  SPLASDDSVLEEGDLVKIDMGCHIDGFIAVVAHTHVIQEGPVTGRKADV 140



 Score = 60.8 bits (146), Expect(2) = 3e-23
 Identities = 25/29 (86%), Positives = 28/29 (96%)
 Frame = -2

Query: 223 NVYKNVKKKIERGVAFPTCLSVNNTLCHF 137
           N+YKNVKKKIERGVAFPTCLS+NN +CHF
Sbjct: 63  NMYKNVKKKIERGVAFPTCLSINNVVCHF 91


>gb|AEY75257.1| putative DNA binding protein [Atriplex canescens]
          Length = 396

 Score = 74.7 bits (182), Expect(2) = 3e-23
 Identities = 37/49 (75%), Positives = 42/49 (85%), Gaps = 4/49 (8%)
 Frame = -1

Query: 137 SPLASDDSVLVAGDILKIDMGCH----IAVVAHTHVLLDGPVTGRQADV 3
           SPLASDDSVL  GD++KIDMGCH    IAVVAHTHV+ +GPVTGR+ADV
Sbjct: 92  SPLASDDSVLEEGDLVKIDMGCHIDGFIAVVAHTHVIQEGPVTGRKADV 140



 Score = 60.8 bits (146), Expect(2) = 3e-23
 Identities = 25/29 (86%), Positives = 28/29 (96%)
 Frame = -2

Query: 223 NVYKNVKKKIERGVAFPTCLSVNNTLCHF 137
           N+YKNVKKKIERGVAFPTCLS+NN +CHF
Sbjct: 63  NMYKNVKKKIERGVAFPTCLSINNVVCHF 91


>ref|XP_003568643.1| PREDICTED: proliferation-associated protein 2G4-like [Brachypodium
           distachyon]
          Length = 394

 Score = 70.1 bits (170), Expect(2) = 1e-22
 Identities = 34/49 (69%), Positives = 40/49 (81%), Gaps = 4/49 (8%)
 Frame = -1

Query: 137 SPLASDDSVLVAGDILKIDMGCHI----AVVAHTHVLLDGPVTGRQADV 3
           SPLA+DD++L   D++KIDMGCHI    AVVAHTHV+ DGPVTGR ADV
Sbjct: 94  SPLATDDAILEENDMVKIDMGCHIDGFIAVVAHTHVIKDGPVTGRAADV 142



 Score = 63.9 bits (154), Expect(2) = 1e-22
 Identities = 27/29 (93%), Positives = 29/29 (100%)
 Frame = -2

Query: 223 NVYKNVKKKIERGVAFPTCLSVNNTLCHF 137
           NVYKNVKKKIERG+AFPTCLSVNNT+CHF
Sbjct: 65  NVYKNVKKKIERGIAFPTCLSVNNTVCHF 93


>gb|ABJ97690.1| EBP1 [Solanum tuberosum]
          Length = 387

 Score = 70.5 bits (171), Expect(2) = 2e-22
 Identities = 35/49 (71%), Positives = 40/49 (81%), Gaps = 4/49 (8%)
 Frame = -1

Query: 137 SPLASDDSVLVAGDILKIDMGCH----IAVVAHTHVLLDGPVTGRQADV 3
           SPLASD++++  GDILKIDMGCH    IAVV HTHVL +GPVTGR ADV
Sbjct: 92  SPLASDETIVEEGDILKIDMGCHIDGFIAVVGHTHVLHEGPVTGRAADV 140



 Score = 62.4 bits (150), Expect(2) = 2e-22
 Identities = 26/29 (89%), Positives = 29/29 (100%)
 Frame = -2

Query: 223 NVYKNVKKKIERGVAFPTCLSVNNTLCHF 137
           N+YKNVKKKIERGVAFPTC+SVNNT+CHF
Sbjct: 63  NMYKNVKKKIERGVAFPTCISVNNTVCHF 91


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