BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00014927
         (287 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI25238.3| unnamed protein product [Vitis vinifera]              174   5e-42
ref|XP_002270825.1| PREDICTED: ribulose bisphosphate carboxylase...   174   5e-42
gb|AAT12492.1| putative RuBisCo activase protein [Zantedeschia h...   167   8e-40
gb|AAZ41846.1| Rubisco activase 2 [Mesembryanthemum crystallinum]     167   1e-39
ref|XP_002299165.1| predicted protein [Populus trichocarpa] gi|2...   165   4e-39

>emb|CBI25238.3| unnamed protein product [Vitis vinifera]
          Length = 440

 Score =  174 bits (442), Expect = 5e-42
 Identities = 80/95 (84%), Positives = 90/95 (94%)
 Frame = -3

Query: 285 SHRIPIIVTGNDLSTIYAPLIRDGRMDKFYWQPTHEDITNIVCKMYEKDGISREAVVNVV 106
           ++R+PIIVTGND STIYAPLIRDGRMDKFYWQPTHEDI NIV +MYEKDGISR+AVV +V
Sbjct: 290 TNRVPIIVTGNDFSTIYAPLIRDGRMDKFYWQPTHEDIINIVDRMYEKDGISRDAVVRIV 349

Query: 105 DSFPNQALDFYGALRSRTYD*SVSKWVDDIGGIKN 1
           D+FPNQALDFYGALRSRTYD S+SKWVDDIGG++N
Sbjct: 350 DTFPNQALDFYGALRSRTYDRSISKWVDDIGGVEN 384


>ref|XP_002270825.1| PREDICTED: ribulose bisphosphate carboxylase/oxygenase activase,
           chloroplastic-like [Vitis vinifera]
          Length = 442

 Score =  174 bits (442), Expect = 5e-42
 Identities = 80/95 (84%), Positives = 90/95 (94%)
 Frame = -3

Query: 285 SHRIPIIVTGNDLSTIYAPLIRDGRMDKFYWQPTHEDITNIVCKMYEKDGISREAVVNVV 106
           ++R+PIIVTGND STIYAPLIRDGRMDKFYWQPTHEDI NIV +MYEKDGISR+AVV +V
Sbjct: 292 TNRVPIIVTGNDFSTIYAPLIRDGRMDKFYWQPTHEDIINIVDRMYEKDGISRDAVVRIV 351

Query: 105 DSFPNQALDFYGALRSRTYD*SVSKWVDDIGGIKN 1
           D+FPNQALDFYGALRSRTYD S+SKWVDDIGG++N
Sbjct: 352 DTFPNQALDFYGALRSRTYDRSISKWVDDIGGVEN 386


>gb|AAT12492.1| putative RuBisCo activase protein [Zantedeschia hybrid cultivar]
          Length = 244

 Score =  167 bits (423), Expect = 8e-40
 Identities = 76/95 (80%), Positives = 87/95 (91%)
 Frame = -3

Query: 285 SHRIPIIVTGNDLSTIYAPLIRDGRMDKFYWQPTHEDITNIVCKMYEKDGISREAVVNVV 106
           +HRIP+IVTGND ST+YAPLIRDGRM+KFYWQPTHEDI NIV +MYEKDGISR+AV ++V
Sbjct: 94  THRIPVIVTGNDFSTLYAPLIRDGRMEKFYWQPTHEDIINIVQRMYEKDGISRDAVESIV 153

Query: 105 DSFPNQALDFYGALRSRTYD*SVSKWVDDIGGIKN 1
           DSFPNQALDFYGALRSRTYD S  KW+D+IGG +N
Sbjct: 154 DSFPNQALDFYGALRSRTYDKSTLKWIDEIGGYEN 188


>gb|AAZ41846.1| Rubisco activase 2 [Mesembryanthemum crystallinum]
          Length = 456

 Score =  167 bits (422), Expect = 1e-39
 Identities = 77/95 (81%), Positives = 87/95 (91%)
 Frame = -3

Query: 285 SHRIPIIVTGNDLSTIYAPLIRDGRMDKFYWQPTHEDITNIVCKMYEKDGISREAVVNVV 106
           +HRIP+IVTGND STIYAPLIRDGRMDKFYWQPTH+DI NIV +MYEKDGIS + VV++V
Sbjct: 306 THRIPVIVTGNDFSTIYAPLIRDGRMDKFYWQPTHDDIVNIVHRMYEKDGISWDEVVSIV 365

Query: 105 DSFPNQALDFYGALRSRTYD*SVSKWVDDIGGIKN 1
           ++FPNQALDFYGA+RSRTYD SV KWVDDIGGI N
Sbjct: 366 NTFPNQALDFYGAMRSRTYDRSVLKWVDDIGGIDN 400


>ref|XP_002299165.1| predicted protein [Populus trichocarpa] gi|222846423|gb|EEE83970.1|
           predicted protein [Populus trichocarpa]
          Length = 428

 Score =  165 bits (417), Expect = 4e-39
 Identities = 76/95 (80%), Positives = 87/95 (91%)
 Frame = -3

Query: 285 SHRIPIIVTGNDLSTIYAPLIRDGRMDKFYWQPTHEDITNIVCKMYEKDGISREAVVNVV 106
           ++R+PIIVTGND STIYAPLIRDGRM+KFYWQP  EDI NIV +MYEKDGISR+ VV++V
Sbjct: 278 TNRVPIIVTGNDFSTIYAPLIRDGRMEKFYWQPNREDIVNIVHRMYEKDGISRDEVVSIV 337

Query: 105 DSFPNQALDFYGALRSRTYD*SVSKWVDDIGGIKN 1
           + FPNQALDFYGALRSRTYD S+SKWVDDIGGI+N
Sbjct: 338 NKFPNQALDFYGALRSRTYDRSISKWVDDIGGIEN 372