BLASTX nr result
ID: Coptis25_contig00014913
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00014913 (285 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002262814.1| PREDICTED: uncharacterized protein LOC100263... 99 5e-19 ref|XP_004146778.1| PREDICTED: 3'-5' exoribonuclease 1-like [Cuc... 88 6e-16 ref|XP_003542802.1| PREDICTED: uncharacterized protein LOC100811... 86 3e-15 ref|XP_003546701.1| PREDICTED: uncharacterized protein LOC100780... 84 9e-15 gb|ABK96614.1| unknown [Populus trichocarpa x Populus deltoides] 82 6e-14 >ref|XP_002262814.1| PREDICTED: uncharacterized protein LOC100263388 [Vitis vinifera] Length = 425 Score = 98.6 bits (244), Expect = 5e-19 Identities = 48/94 (51%), Positives = 63/94 (67%) Frame = +3 Query: 3 RNTARLLTHIMHQGFRFSITNSLMWHTAESQFANFAWHQSLDRQFVPSPSPHKPKSLTFP 182 +NTARLL HIMH+GFRFSITNSL+W + E +H D Q+ P PHK K P Sbjct: 307 KNTARLLAHIMHRGFRFSITNSLIWQSTERPSIRQQFH---DCQYGPIQHPHKLKHPLGP 363 Query: 183 FIQFYPAHMDPSKERRMYCQCGVKSSKCMVRKPG 284 F++F+P ++P K+ YC CGV+SS+ M+RKPG Sbjct: 364 FMRFHPIPVEPEKDLGTYCFCGVRSSRQMLRKPG 397 >ref|XP_004146778.1| PREDICTED: 3'-5' exoribonuclease 1-like [Cucumis sativus] gi|449511572|ref|XP_004163993.1| PREDICTED: 3'-5' exoribonuclease 1-like [Cucumis sativus] Length = 414 Score = 88.2 bits (217), Expect = 6e-16 Identities = 46/94 (48%), Positives = 56/94 (59%) Frame = +3 Query: 3 RNTARLLTHIMHQGFRFSITNSLMWHTAESQFANFAWHQSLDRQFVPSPSPHKPKSLTFP 182 +NTARLL IMH+GFRFSITNSLMW T + W QS + P P KPK + P Sbjct: 306 KNTARLLALIMHKGFRFSITNSLMWQTTD---CPLQWKQSPETVTFPPQPPMKPKPMHIP 362 Query: 183 FIQFYPAHMDPSKERRMYCQCGVKSSKCMVRKPG 284 +Q++P YC CGV+SS+ MVRKPG Sbjct: 363 IVQYFP-----------YCFCGVRSSRGMVRKPG 385 >ref|XP_003542802.1| PREDICTED: uncharacterized protein LOC100811151 [Glycine max] Length = 414 Score = 85.9 bits (211), Expect = 3e-15 Identities = 44/94 (46%), Positives = 59/94 (62%) Frame = +3 Query: 3 RNTARLLTHIMHQGFRFSITNSLMWHTAESQFANFAWHQSLDRQFVPSPSPHKPKSLTFP 182 +NTARLL +MH+GF+FSITNS+MW TA+ W QS ++ V P+K K +T P Sbjct: 306 KNTARLLALLMHRGFKFSITNSIMWQTADRP---LMWKQSPEQPIVFPHCPYKAKDITTP 362 Query: 183 FIQFYPAHMDPSKERRMYCQCGVKSSKCMVRKPG 284 +Q++P +C CGVKSS+ MVRKPG Sbjct: 363 VVQYHP-----------FCFCGVKSSRGMVRKPG 385 >ref|XP_003546701.1| PREDICTED: uncharacterized protein LOC100780340 [Glycine max] Length = 414 Score = 84.3 bits (207), Expect = 9e-15 Identities = 43/93 (46%), Positives = 58/93 (62%) Frame = +3 Query: 3 RNTARLLTHIMHQGFRFSITNSLMWHTAESQFANFAWHQSLDRQFVPSPSPHKPKSLTFP 182 +NTA LL +MH+GF+FSITNS+MW TA+ W QS ++ V SP+K K +T P Sbjct: 306 KNTAHLLALLMHRGFKFSITNSIMWQTADRP---LMWKQSPEQPIVFPHSPYKAKDITIP 362 Query: 183 FIQFYPAHMDPSKERRMYCQCGVKSSKCMVRKP 281 +Q++P +C CGVKSS+ MVRKP Sbjct: 363 VVQYHP-----------FCFCGVKSSRGMVRKP 384 >gb|ABK96614.1| unknown [Populus trichocarpa x Populus deltoides] Length = 409 Score = 81.6 bits (200), Expect = 6e-14 Identities = 44/94 (46%), Positives = 56/94 (59%) Frame = +3 Query: 3 RNTARLLTHIMHQGFRFSITNSLMWHTAESQFANFAWHQSLDRQFVPSPSPHKPKSLTFP 182 +NTARLL +MH+G RFSITNSLMWHT +S + + QS + + PHK K + P Sbjct: 301 KNTARLLALLMHRGIRFSITNSLMWHTTDS---SLSCKQSTENLSLAPHQPHKLKEIHTP 357 Query: 183 FIQFYPAHMDPSKERRMYCQCGVKSSKCMVRKPG 284 ++P +C CGVKSSK MVRKPG Sbjct: 358 VFPYHP-----------FCFCGVKSSKGMVRKPG 380