BLASTX nr result

ID: Coptis25_contig00014913 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00014913
         (285 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002262814.1| PREDICTED: uncharacterized protein LOC100263...    99   5e-19
ref|XP_004146778.1| PREDICTED: 3'-5' exoribonuclease 1-like [Cuc...    88   6e-16
ref|XP_003542802.1| PREDICTED: uncharacterized protein LOC100811...    86   3e-15
ref|XP_003546701.1| PREDICTED: uncharacterized protein LOC100780...    84   9e-15
gb|ABK96614.1| unknown [Populus trichocarpa x Populus deltoides]       82   6e-14

>ref|XP_002262814.1| PREDICTED: uncharacterized protein LOC100263388 [Vitis vinifera]
          Length = 425

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 48/94 (51%), Positives = 63/94 (67%)
 Frame = +3

Query: 3   RNTARLLTHIMHQGFRFSITNSLMWHTAESQFANFAWHQSLDRQFVPSPSPHKPKSLTFP 182
           +NTARLL HIMH+GFRFSITNSL+W + E       +H   D Q+ P   PHK K    P
Sbjct: 307 KNTARLLAHIMHRGFRFSITNSLIWQSTERPSIRQQFH---DCQYGPIQHPHKLKHPLGP 363

Query: 183 FIQFYPAHMDPSKERRMYCQCGVKSSKCMVRKPG 284
           F++F+P  ++P K+   YC CGV+SS+ M+RKPG
Sbjct: 364 FMRFHPIPVEPEKDLGTYCFCGVRSSRQMLRKPG 397


>ref|XP_004146778.1| PREDICTED: 3'-5' exoribonuclease 1-like [Cucumis sativus]
           gi|449511572|ref|XP_004163993.1| PREDICTED: 3'-5'
           exoribonuclease 1-like [Cucumis sativus]
          Length = 414

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 46/94 (48%), Positives = 56/94 (59%)
 Frame = +3

Query: 3   RNTARLLTHIMHQGFRFSITNSLMWHTAESQFANFAWHQSLDRQFVPSPSPHKPKSLTFP 182
           +NTARLL  IMH+GFRFSITNSLMW T +       W QS +    P   P KPK +  P
Sbjct: 306 KNTARLLALIMHKGFRFSITNSLMWQTTD---CPLQWKQSPETVTFPPQPPMKPKPMHIP 362

Query: 183 FIQFYPAHMDPSKERRMYCQCGVKSSKCMVRKPG 284
            +Q++P           YC CGV+SS+ MVRKPG
Sbjct: 363 IVQYFP-----------YCFCGVRSSRGMVRKPG 385


>ref|XP_003542802.1| PREDICTED: uncharacterized protein LOC100811151 [Glycine max]
          Length = 414

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 44/94 (46%), Positives = 59/94 (62%)
 Frame = +3

Query: 3   RNTARLLTHIMHQGFRFSITNSLMWHTAESQFANFAWHQSLDRQFVPSPSPHKPKSLTFP 182
           +NTARLL  +MH+GF+FSITNS+MW TA+       W QS ++  V    P+K K +T P
Sbjct: 306 KNTARLLALLMHRGFKFSITNSIMWQTADRP---LMWKQSPEQPIVFPHCPYKAKDITTP 362

Query: 183 FIQFYPAHMDPSKERRMYCQCGVKSSKCMVRKPG 284
            +Q++P           +C CGVKSS+ MVRKPG
Sbjct: 363 VVQYHP-----------FCFCGVKSSRGMVRKPG 385


>ref|XP_003546701.1| PREDICTED: uncharacterized protein LOC100780340 [Glycine max]
          Length = 414

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 43/93 (46%), Positives = 58/93 (62%)
 Frame = +3

Query: 3   RNTARLLTHIMHQGFRFSITNSLMWHTAESQFANFAWHQSLDRQFVPSPSPHKPKSLTFP 182
           +NTA LL  +MH+GF+FSITNS+MW TA+       W QS ++  V   SP+K K +T P
Sbjct: 306 KNTAHLLALLMHRGFKFSITNSIMWQTADRP---LMWKQSPEQPIVFPHSPYKAKDITIP 362

Query: 183 FIQFYPAHMDPSKERRMYCQCGVKSSKCMVRKP 281
            +Q++P           +C CGVKSS+ MVRKP
Sbjct: 363 VVQYHP-----------FCFCGVKSSRGMVRKP 384


>gb|ABK96614.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 409

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 44/94 (46%), Positives = 56/94 (59%)
 Frame = +3

Query: 3   RNTARLLTHIMHQGFRFSITNSLMWHTAESQFANFAWHQSLDRQFVPSPSPHKPKSLTFP 182
           +NTARLL  +MH+G RFSITNSLMWHT +S   + +  QS +   +    PHK K +  P
Sbjct: 301 KNTARLLALLMHRGIRFSITNSLMWHTTDS---SLSCKQSTENLSLAPHQPHKLKEIHTP 357

Query: 183 FIQFYPAHMDPSKERRMYCQCGVKSSKCMVRKPG 284
              ++P           +C CGVKSSK MVRKPG
Sbjct: 358 VFPYHP-----------FCFCGVKSSKGMVRKPG 380


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