BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00014908
         (1838 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002514362.1| conserved hypothetical protein [Ricinus comm...   232   2e-58
ref|XP_002282223.2| PREDICTED: carbon catabolite repressor prote...   199   2e-48
ref|XP_003545500.1| PREDICTED: carbon catabolite repressor prote...   192   2e-46
ref|XP_002324275.1| predicted protein [Populus trichocarpa] gi|2...   178   5e-42
ref|NP_196696.2| carbon catabolite repressor protein 4-like 6 [A...   166   1e-38

>ref|XP_002514362.1| conserved hypothetical protein [Ricinus communis]
            gi|223546818|gb|EEF48316.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 809

 Score =  232 bits (592), Expect = 2e-58
 Identities = 175/520 (33%), Positives = 250/520 (48%), Gaps = 15/520 (2%)
 Frame = +2

Query: 2    TGLARDQMSGQSSAEIRTQRPYTPNFRSQTPNNSAQPSMLTEEKE------FDGKHSDCI 163
            +G+ RD++SGQ+S+EIR  R   PN+    PN +A P +L+ +         + K  D +
Sbjct: 342  SGIDRDKVSGQASSEIRAPRQNNPNY---IPNPNANPRILSSDNSSQTPLVINNKLDDSL 398

Query: 164  PEIQNNDKPNSDVENAQLVNNLHQPQSDTPFNARSREE---KKTDSSLSSKEMQCESIDS 334
             ++Q  + PN D  +   VNN   PQ      A S        + S   +KEM  + ID 
Sbjct: 399  SDMQKQNIPNDD--SIPSVNNCSAPQVMRTMLAVSDASCAVLHSGSIKETKEMLEDVIDG 456

Query: 335  CKNELSSSCDXXXXXXXXXXXXXXGDQGLTTPSTACQNDNSVVAENLHGNQSSGFTDHSI 514
            CK    S+                 ++ LTT     +N++ ++              H  
Sbjct: 457  CKEGTESTISVLINRF---------EENLTTSHR--ENESDLI--------------HKS 491

Query: 515  PRTLTEHSQSNLSMSRLFTANLQDELVRDEMDEGTRVTKESVSSLIRESSLDEKLENAFI 694
              T T HS+        +    + E  +           E+  S I + + D  ++N   
Sbjct: 492  TPTGTSHSEET------YPDKNEMEWTKSACPSNQVFCCENSPSNICKENKDINIDN--- 542

Query: 695  HVSRPDLVPETTSFADENKITLSESSGISSVQLIDGGAGKAYSSISYQSACNVETSNVAT 874
                          A   +++   SSG  S Q I              +AC    S+ +T
Sbjct: 543  -------------LAQSLEVSPLPSSGYLSSQPIANDENS-----DLLTACQANISSGST 584

Query: 875  NIDFNEDQKLFGTSLEATE----EVGSFGQAYSSMLPSEVNSVDYVFQSDIGHDSESVTP 1042
             + +  ++KL   S         E G  G+  ++ L S ++  +  FQ+D G  ++S   
Sbjct: 585  GLYYEGEEKLEDASPGEVNDFQLEHGMVGEDQNTFL-SALHDKEDSFQTDFGQITQSDLA 643

Query: 1043 --ETDKTGQYLEKHATDQQKLKSLPLRNEIQGDSILFIDSDLAVGEKNKYDPSLWTPVEI 1216
              ++D     +++              NE+     L +DS+    +K  Y+PSLWTP+E+
Sbjct: 644  HFQSDCISVPIDRQVHSHG--------NEVLDGVSLDLDSESVTVDKTAYNPSLWTPMEV 695

Query: 1217 MTASGNADCTVLEHPLKLKSTYAEVEDYSGTRDSSREPQVTSYNRRFMGTVDYIWCSEGL 1396
             TA+GNADCT LEHPLKLKS YAEVED SGTRD + EP VTSYNR F+GTVDYIW SEGL
Sbjct: 696  ATATGNADCTFLEHPLKLKSAYAEVEDCSGTRDPNGEPLVTSYNRCFLGTVDYIWKSEGL 755

Query: 1397 QTVKVLHTIPKHALQWTSGFPTKKWGSDHIALASQLAFTK 1516
            QT++VL  IPKHA+QWT GFPTKKWGSDHIALAS+LAFTK
Sbjct: 756  QTIRVLAPIPKHAMQWTPGFPTKKWGSDHIALASELAFTK 795


>ref|XP_002282223.2| PREDICTED: carbon catabolite repressor protein 4 homolog 6-like
            [Vitis vinifera] gi|296081966|emb|CBI20971.3| unnamed
            protein product [Vitis vinifera]
          Length = 786

 Score =  199 bits (507), Expect = 2e-48
 Identities = 112/226 (49%), Positives = 141/226 (62%), Gaps = 4/226 (1%)
 Frame = +2

Query: 851  VETSNVATNIDFNEDQKLFGTSL----EATEEVGSFGQAYSSMLPSEVNSVDYVFQSDIG 1018
            +  S+ +T+ D   D++L   +L    E TEE G+ G+  S+ L SE+N  +  F SD G
Sbjct: 589  INISDASTSFDIVLDKQLENLTLDEADEDTEENGNLGEDCSTFL-SELNKTEETFPSDFG 647

Query: 1019 HDSESVTPETDKTGQYLEKHATDQQKLKSLPLRNEIQGDSILFIDSDLAVGEKNKYDPSL 1198
                S                            ++I  D    I+ +    E + YDPS+
Sbjct: 648  QSVRS----------------------------DQILDDFSPSIEPEPFEMEISAYDPSV 679

Query: 1199 WTPVEIMTASGNADCTVLEHPLKLKSTYAEVEDYSGTRDSSREPQVTSYNRRFMGTVDYI 1378
            WTP+EI TA+GNADCT LEHPLKLKSTY EVED SGT+DS+ EP VTSYNR F+GTVDYI
Sbjct: 680  WTPMEIETATGNADCTHLEHPLKLKSTYTEVEDRSGTKDSNGEPLVTSYNRCFLGTVDYI 739

Query: 1379 WCSEGLQTVKVLHTIPKHALQWTSGFPTKKWGSDHIALASQLAFTK 1516
            W SEGL+T++ L  IPK A+QWT GFPTKKWGSDHIALA++LAFTK
Sbjct: 740  WRSEGLKTIRALAPIPKQAMQWTPGFPTKKWGSDHIALATELAFTK 785



 Score = 72.0 bits (175), Expect = 5e-10
 Identities = 44/123 (35%), Positives = 65/123 (52%), Gaps = 8/123 (6%)
 Frame = +2

Query: 2   TGLARDQMSGQSSAEIRTQRPYTPNFRSQTPNNSAQPSMLTEEKEFDGKHSDCIPEIQNN 181
           +GL RD++SGQ+SAEIR  R ++PN R Q  +NSAQ   + + +E   K SD + EIQ  
Sbjct: 373 SGLDRDKVSGQASAEIRAPRQFSPNPRIQLTDNSAQGLTMNDVREVGAKDSDSLLEIQKQ 432

Query: 182 DKPNSDVENAQLVNNLHQPQ--------SDTPFNARSREEKKTDSSLSSKEMQCESIDSC 337
             P+S+V N   ++NL Q Q          +  N +   + +  S    KE Q E +   
Sbjct: 433 TYPDSNVGNVASMDNLSQAQCINTVLHVDKSCTNGQHENDTRAPSDEMIKETQQEKVGGF 492

Query: 338 KNE 346
           +NE
Sbjct: 493 ENE 495


>ref|XP_003545500.1| PREDICTED: carbon catabolite repressor protein 4 homolog 6-like
            [Glycine max]
          Length = 852

 Score =  192 bits (489), Expect = 2e-46
 Identities = 170/522 (32%), Positives = 246/522 (47%), Gaps = 17/522 (3%)
 Frame = +2

Query: 2    TGLARDQMSGQSSAEIRTQRPYT-PNFRSQTPNNSAQPSMLTEEKEFDGKHSDCIPEIQN 178
            +G+ R+++SGQ+SA I   + Y  PN    + N S Q +    +KE          +I+ 
Sbjct: 363  SGIDRNKVSGQASATIHASKLYYGPNSSEISANGSVQATSTEGDKE----------DIEQ 412

Query: 179  N----DKPNSDVENAQLVNNLHQPQSDTPFNARSREE-KKTDSSLSSKEMQCESID---- 331
            N    D  + D +   L N   Q  SD   N+ +  +  K   + + K+ Q  S+D    
Sbjct: 413  NNSRLDTRDLDTKCHSLDNQHTQTVSDMSVNSCTNVDCGKESDAYAGKDTQETSVDHSKV 472

Query: 332  SCKNELSSSCDXXXXXXXXXXXXXXGDQGLTTPSTACQNDNSVVAENLHGNQSSGFTDHS 511
            SC+       +              GD    TP T          E +H + +   ++  
Sbjct: 473  SCEVGSIKEPNPSYSEGRIHIDHVNGDIHDITPVTFS------APEEVHSDATWLGSNEH 526

Query: 512  IPRTL-TEHSQSNLSMSRLFTANLQDELVRDEMDEGTRVTKESVSSLIRESSLDEKLENA 688
            IP  + T + +  +  S L        +  D      +   +S    I   S+D  L+N 
Sbjct: 527  IPNAVPTSNKELLIEESNLHVPEGNKHVEFDCAPTSLQEDDQSSKMRIDLESID--LDNI 584

Query: 689  FIHVSRPDLVPETTS-FADENKITLSESSGISSVQLIDGGAGKAYSSISYQSACNVETSN 865
             I  ++P      +  F DE+  +  E         ID     + SS SY     V+  +
Sbjct: 585  EISSTKPSSQTSVSCVFEDEDSPSHEE---------IDNDQNNS-SSTSYL----VDKLH 630

Query: 866  VATNIDFNED--QKLFGTSLEATEEVGSFGQAYSSMLPSEVNSVDYVFQSDIGHDSESVT 1039
              +NI F  D  +K F   ++ T  +G   +  S  + S  N+ +  F  D+G   +S  
Sbjct: 631  HLSNITFPPDMKEKSFFDEMDKTI-IGGESEDGSRFVSSLHNAGEVAF--DLGSSMKS-- 685

Query: 1040 PETDKTGQYLEKHATDQQKL---KSLPLRNEIQGDSILFIDSDLAVGEKNKYDPSLWTPV 1210
             + +K  Q  E  +     L   +S+ + + +    I    S+    E+  Y P+LWTP+
Sbjct: 686  -DLEKPYQSEELDSASNNLLLPVESIEMEDYLSPRQI----SESINSEQATYTPALWTPM 740

Query: 1211 EIMTASGNADCTVLEHPLKLKSTYAEVEDYSGTRDSSREPQVTSYNRRFMGTVDYIWCSE 1390
            EI TA+GNADCT LEHPL+L+STY E  D SGTRD   EP VTSYNRRF+GTVDYIW SE
Sbjct: 741  EIETATGNADCTFLEHPLQLRSTYTEAMDCSGTRDPHGEPLVTSYNRRFLGTVDYIWRSE 800

Query: 1391 GLQTVKVLHTIPKHALQWTSGFPTKKWGSDHIALASQLAFTK 1516
            GLQT +VL  I KHA+QWT GFPTKKWGSDHIAL ++LAF K
Sbjct: 801  GLQTTRVLAPISKHAMQWTPGFPTKKWGSDHIALVTELAFLK 842


>ref|XP_002324275.1| predicted protein [Populus trichocarpa] gi|222865709|gb|EEF02840.1|
            predicted protein [Populus trichocarpa]
          Length = 380

 Score =  178 bits (451), Expect = 5e-42
 Identities = 83/113 (73%), Positives = 94/113 (83%)
 Frame = +2

Query: 1178 NKYDPSLWTPVEIMTASGNADCTVLEHPLKLKSTYAEVEDYSGTRDSSREPQVTSYNRRF 1357
            N   PSLWTP+EI+TA+GN DC  +EHPLKLKSTY +VED  GTRD + EP VTSYNR F
Sbjct: 258  NANGPSLWTPMEIVTATGNVDCMFVEHPLKLKSTYTQVEDCYGTRDPNGEPLVTSYNRCF 317

Query: 1358 MGTVDYIWCSEGLQTVKVLHTIPKHALQWTSGFPTKKWGSDHIALASQLAFTK 1516
             GTVDYIW SEGLQTV+VL  + KHA+QWT+GFPTKKWGSDHIALAS+ AFTK
Sbjct: 318  FGTVDYIWYSEGLQTVRVLAPMAKHAMQWTAGFPTKKWGSDHIALASEFAFTK 370


>ref|NP_196696.2| carbon catabolite repressor protein 4-like 6 [Arabidopsis thaliana]
            gi|215275264|sp|Q8VYU4.2|CCR4F_ARATH RecName: Full=Carbon
            catabolite repressor protein 4 homolog 6; Short=CCR4
            homolog 6 gi|332004281|gb|AED91664.1| carbon catabolite
            repressor protein 4-like 6 [Arabidopsis thaliana]
          Length = 754

 Score =  166 bits (421), Expect = 1e-38
 Identities = 97/242 (40%), Positives = 137/242 (56%), Gaps = 21/242 (8%)
 Frame = +2

Query: 848  NVETSNVATNIDFNEDQKLFGTSLEA---TEEVGSFGQAYSSMLPSEVNSVDYVFQSDIG 1018
            N+ T+   +++  ++ +    +S      T+   S G + +   P E+ S D    S + 
Sbjct: 504  NLSTAEDLSSLTISDTEPQHASSAREDLNTDRSVSSGLSETEQTPEEICSSDQDISSSLS 563

Query: 1019 HDSESVTPETDKTGQYLEK---HATDQQKL---------------KSLPLRNEIQGDSIL 1144
               ++   E    G  L++    A D++ L               ++L  + E+  +  L
Sbjct: 564  TKVDTFVAEMKLDGLKLDEPVVFAQDEESLGEDGETFLAKLHDNNENLSQKGELVSEVPL 623

Query: 1145 FIDSDLAVGEKNKYDPSLWTPVEIMTASGNADCTVLEHPLKLKSTYAEVEDYSGTRDSSR 1324
               S+    +K  Y PS WTP+EI TA+G+ + T +EH L+LKSTY+EVE  + TRD + 
Sbjct: 624  KWSSEALNSDKITYSPSSWTPMEIATATGDPERTTVEHALELKSTYSEVEGQANTRDENG 683

Query: 1325 EPQVTSYNRRFMGTVDYIWCSEGLQTVKVLHTIPKHALQWTSGFPTKKWGSDHIALASQL 1504
            EP VTSY+R FMGTVDYIW SEGLQTV+VL  IPK A+QWT GFPT KWGSDHIAL S+L
Sbjct: 684  EPVVTSYHRCFMGTVDYIWRSEGLQTVRVLAPIPKQAMQWTPGFPTPKWGSDHIALVSEL 743

Query: 1505 AF 1510
            AF
Sbjct: 744  AF 745