BLASTX nr result
ID: Coptis25_contig00014877
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00014877
(1597 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI32919.3| unnamed protein product [Vitis vinifera] 98 5e-18
emb|CAN74740.1| hypothetical protein VITISV_040899 [Vitis vinifera] 90 1e-15
ref|NP_001190724.1| F-box/LRR-repeat protein [Arabidopsis thalia... 76 2e-11
ref|NP_567422.1| F-box/LRR-repeat protein [Arabidopsis thaliana]... 75 5e-11
ref|NP_191479.1| F-box/LRR-repeat protein [Arabidopsis thaliana]... 75 6e-11
>emb|CBI32919.3| unnamed protein product [Vitis vinifera]
Length = 411
Score = 98.2 bits (243), Expect = 5e-18
Identities = 107/396 (27%), Positives = 173/396 (43%), Gaps = 5/396 (1%)
Frame = +2
Query: 56 AEDRISSLQDDIIHCIYSFLDMRXXXXXXXXSRRWRYIWLSNPYINI-XXXXXXXXXXXX 232
+ DRIS+L D ++ I SFL + S+RWRY+W S P ++
Sbjct: 8 SRDRISNLPDAVLCHIISFLPTKFAVGTSVLSKRWRYLWASIPNLDFDDDLLLDRDKPIG 67
Query: 233 XXXXXXKFINIVNQVLHRRRSSSIILKFSLTLSGWYFDRTWKVDEWVNSVLSRNVQEVSL 412
F N V++VL S S I KF L S D V+ W+ + L RNVQE+ L
Sbjct: 68 DSERSICFKNFVDKVL-LHGSISCIRKFRLKCSDHELDSA--VNSWICTALERNVQELDL 124
Query: 413 EAMDIKY-YTLKTLASEVKSLKLKRVCFVGVESEKLLLSSEVMETLVICKLYLGK--TLS 583
D +Y L K+L + ++C V+E LVI + L + +
Sbjct: 125 -YFDTEYPIELPPKFFFCKTLVVLKLC-------------PVLEELVIERWRLDEQWVFN 170
Query: 584 ISMPSVKHLLFNFGGESGCEPVHAEVHAPNLTLLQIKGCICKGFSLENLSSIVTAEIDHD 763
+S P++K L F V APNL L I + + + + NLSS+V A ++
Sbjct: 171 VSAPTLKSLAIYF------SKYKLVVDAPNLEYLSITDFVSEDYLMSNLSSLVKAYVNVG 224
Query: 764 YCWWRVKDQEKLENLAWCLTNILKGLPNVKSLTLPANIFQAFTNLPNWSKEVLHKYHNLR 943
+ DQ + +L+G+ NVK L+L + + + + L +H++
Sbjct: 225 PTIRGIDDQILYRGRIY---ELLRGISNVKHLSLSGETLHSLSGM--FCGYELPAFHSVT 279
Query: 944 YLKLRCWSCKSPANILGLVELVVNIPHVETLVMEREEQVFISNAEDIDWKEQLSL-QCVF 1120
L+L + L E + P++E L++E + E +W L + CV
Sbjct: 280 RLEL---EVDYGYGLEFLKEFLDTSPNLEILILENVNK---DECEIEEWTLPLQVPTCVE 333
Query: 1121 PHLKSIEMRYLEWCEQELRFLELLVKNAIVLDNITI 1228
HL +E++ + + EL +E L+KNA VL ++I
Sbjct: 334 LHLNEVEIKKFDGLDYELGAIEFLLKNARVLKKMSI 369
>emb|CAN74740.1| hypothetical protein VITISV_040899 [Vitis vinifera]
Length = 607
Score = 90.1 bits (222), Expect = 1e-15
Identities = 115/437 (26%), Positives = 182/437 (41%), Gaps = 46/437 (10%)
Frame = +2
Query: 56 AEDRISSLQDDIIHCIYSFLDMRXXXXXXXXSRRWRYIWLSNPYINI-XXXXXXXXXXXX 232
+ D IS+L D+++ I SFL + S+RWRY+W S P ++
Sbjct: 8 SRDIISNLPDELLCHILSFLPTKFAVGTSILSKRWRYLWASVPILDFDDELWLNPSTLVE 67
Query: 233 XXXXXXKFINIVNQVLHRRRSSSIILKFSLTLSGWYFDRTWKVDEWVNSVLSRNVQEVSL 412
F N V+ VL R S I KF L G+ + V W+ L R VQE+ L
Sbjct: 68 LEERIIMFQNFVDGVL-RHSEVSCIKKFRL---GYRDNNLDSVYSWICIALERRVQELDL 123
Query: 413 E-------AMDIKYYTLKTLA------------------SEVKSLKLKRVCFVGVES-EK 514
+ ++ KTL +K+L LK V + +S +K
Sbjct: 124 HLLIDWRVELPPMFFICKTLVVVKLSCALFLDIPTTVWLPSLKALHLKSVEYSDDDSIQK 183
Query: 515 LLLSSEVMETLVICKLYLGK--TLSISMPSVKHLLFNFGGESGCEPVHAE-------VHA 667
LL V+E LVI + +++S PS+K L F + P E V A
Sbjct: 184 LLSGCPVLEELVIEREERDNQWVVNVSNPSLKILRIFFFTDGFAHPYEQEDQDYKVVVDA 243
Query: 668 PNLTLLQIKGCICKGFSLENLSSIVTAEIDHDYCWWRVKDQEKLE--------NLAWCLT 823
PNL L I + K + +++L S+V A ID + +D E+ E + +
Sbjct: 244 PNLEYLSITDYLSKDYFVKDLPSLVKAFIDVE------QDSEEFEESPHNGGISYHGPIY 297
Query: 824 NILKGLPNVKSLTLPANIFQAFT-NLPNWSKEVLHKYHNLRYLKLRCWSCKSPANILGLV 1000
+L + NVK L+L + + + ++ H L +L + ++ N L
Sbjct: 298 ELLGRISNVKCLSLTGVTLDSLSGTIGDYKLPTFHNMTRLEFLFIGGFNWDFLPNFLH-- 355
Query: 1001 ELVVNIPHVETLVMEREEQVFISNAEDIDWKEQLSL-QCVFPHLKSIEMRYLEWCEQELR 1177
+ P++E LV+E + + W L + C+ HLK IE+R + + EL
Sbjct: 356 ----SSPNLEALVIETG---YTNELIPEGWLMPLQVPACLVLHLKEIEIRRIVGEDYELE 408
Query: 1178 FLELLVKNAIVLDNITI 1228
+E L+KNA VL +TI
Sbjct: 409 AVEYLLKNAEVLQQMTI 425
>ref|NP_001190724.1| F-box/LRR-repeat protein [Arabidopsis thaliana]
gi|332657973|gb|AEE83373.1| F-box/LRR-repeat protein
[Arabidopsis thaliana]
Length = 443
Score = 76.3 bits (186), Expect = 2e-11
Identities = 108/446 (24%), Positives = 198/446 (44%), Gaps = 48/446 (10%)
Frame = +2
Query: 56 AEDRISSLQDDIIHCIYSFLDMRXXXXXXXXSRRWRYIWLSNPYINIXXXXXXXXXXXXX 235
+ D ISSL DDI I SFL + S++WRY++ P N+
Sbjct: 6 SRDVISSLPDDISSHILSFLPTKEAASTSVLSKKWRYLFAFVP--NLDLDDSVYLNPENE 63
Query: 236 XXXXXKFINIVNQVLHRRRSSSIILKFSLTLSGWYFDRTWKVDEWVNSVLSRNVQEVSLE 415
F++ V++VL + +S + KFSL + G D ++ W+N+VL R V ++ L
Sbjct: 64 TEISTSFMDFVDRVL-ALQGNSPLHKFSLKI-GDGIDPV-RIIPWINNVLERGVSDLDLH 120
Query: 416 -------AMDIKYYTLKTLA-------------------SEVKSLKLKRVCFV--GVESE 511
+ + Y KTL ++K+L ++ F GV
Sbjct: 121 LNLESEFLLPSQVYLCKTLVWLKLRFGLYPTIDVEDVHLPKLKTLYIEATHFEEHGVGLT 180
Query: 512 KLLLSSEVMETLVICKL--YLGKTLSISMPSVKHLLFNFGGESGCEPVHAEVHAPNLTLL 685
KLL ++E LV+ + ++ S+S+P++K L F++ E P + PNL L
Sbjct: 181 KLLSGCPMLEDLVLDDISWFIWDFASVSVPTLKRLRFSW-QERDEFPKSVLLDTPNLVYL 239
Query: 686 QIKGCICKGFSLENLSSIVTAEIDHDYCWWRVKDQEK---LENLAWCLTNILKGLPNVKS 856
+ + + NL S+V A ID + + + ++ T+ + + NVK+
Sbjct: 240 KFTDTVAGKYPKVNLDSLVEAHIDLRLLKPLLINYHQGYGENDMVGNATDFIMRICNVKT 299
Query: 857 LTLPANIFQAFTNLPNWSKEVLHKYHNLRYLKLRCWSCKSPANILGLVELVVNIPHVETL 1036
L L AN Q T +S + + ++NL +L + ++ GL++ N P++ETL
Sbjct: 300 LYLSANTLQVLT----YSCDAIPIFNNLTHLTIESNPRVGWQSVPGLLK---NSPNLETL 352
Query: 1037 VMEREEQV-FISNAEDID-WKEQLSLQC-VFPHLKSIEMRY-----LEWCEQELRFLELL 1192
+ + + + F N++D++ +EQ+ P+L+ + + Y + E R L+
Sbjct: 353 IFQVIKILKFGENSDDMEKQREQIKYFLETMPNLEKMILYYNTPSVEDVTEVSSRLQRLV 412
Query: 1193 VKNA-------IVLDNITIKTIRSTS 1249
K A ++ DN+++ + ST+
Sbjct: 413 SKVASSTCIVQLISDNLSLSSTVSTN 438
>ref|NP_567422.1| F-box/LRR-repeat protein [Arabidopsis thaliana]
gi|75245750|sp|Q8L7H1.1|FBL75_ARATH RecName:
Full=F-box/LRR-repeat protein At4g14103
gi|22136642|gb|AAM91640.1| unknown protein [Arabidopsis
thaliana] gi|332657972|gb|AEE83372.1| F-box/LRR-repeat
protein [Arabidopsis thaliana]
Length = 381
Score = 75.1 bits (183), Expect = 5e-11
Identities = 91/363 (25%), Positives = 160/363 (44%), Gaps = 33/363 (9%)
Frame = +2
Query: 56 AEDRISSLQDDIIHCIYSFLDMRXXXXXXXXSRRWRYIWLSNPYINIXXXXXXXXXXXXX 235
+ D ISSL DDI I SFL + S++WRY++ P N+
Sbjct: 6 SRDVISSLPDDISSHILSFLPTKEAASTSVLSKKWRYLFAFVP--NLDLDDSVYLNPENE 63
Query: 236 XXXXXKFINIVNQVLHRRRSSSIILKFSLTLSGWYFDRTWKVDEWVNSVLSRNVQEVSLE 415
F++ V++VL + +S + KFSL + G D ++ W+N+VL R V ++ L
Sbjct: 64 TEISTSFMDFVDRVL-ALQGNSPLHKFSLKI-GDGIDPV-RIIPWINNVLERGVSDLDLH 120
Query: 416 -------AMDIKYYTLKTLA-------------------SEVKSLKLKRVCFV--GVESE 511
+ + Y KTL ++K+L ++ F GV
Sbjct: 121 LNLESEFLLPSQVYLCKTLVWLKLRFGLYPTIDVEDVHLPKLKTLYIEATHFEEHGVGLT 180
Query: 512 KLLLSSEVMETLVICKL--YLGKTLSISMPSVKHLLFNFGGESGCEPVHAEVHAPNLTLL 685
KLL ++E LV+ + ++ S+S+P++K L F++ E P + PNL L
Sbjct: 181 KLLSGCPMLEDLVLDDISWFIWDFASVSVPTLKRLRFSW-QERDEFPKSVLLDTPNLVYL 239
Query: 686 QIKGCICKGFSLENLSSIVTAEIDHDYCWWRVKDQEK---LENLAWCLTNILKGLPNVKS 856
+ + + NL S+V A ID + + + ++ T+ + + NVK+
Sbjct: 240 KFTDTVAGKYPKVNLDSLVEAHIDLRLLKPLLINYHQGYGENDMVGNATDFIMRICNVKT 299
Query: 857 LTLPANIFQAFTNLPNWSKEVLHKYHNLRYLKLRCWSCKSPANILGLVELVVNIPHVETL 1036
L L AN Q T +S + + ++NL +L + ++ GL++ N P++ETL
Sbjct: 300 LYLSANTLQVLT----YSCDAIPIFNNLTHLTIESNPRVGWQSVPGLLK---NSPNLETL 352
Query: 1037 VME 1045
+ +
Sbjct: 353 IFQ 355
>ref|NP_191479.1| F-box/LRR-repeat protein [Arabidopsis thaliana]
gi|75264308|sp|Q9LX51.1|FBL64_ARATH RecName:
Full=F-box/LRR-repeat protein At3g59200
gi|7801670|emb|CAB91590.1| putative protein [Arabidopsis
thaliana] gi|26450835|dbj|BAC42525.1| unknown protein
[Arabidopsis thaliana] gi|29028916|gb|AAO64837.1|
At3g59200 [Arabidopsis thaliana]
gi|332646367|gb|AEE79888.1| F-box/LRR-repeat protein
[Arabidopsis thaliana]
Length = 520
Score = 74.7 bits (182), Expect = 6e-11
Identities = 94/374 (25%), Positives = 157/374 (41%), Gaps = 42/374 (11%)
Frame = +2
Query: 53 MAEDRISSLQDDIIHCIYSFLDMRXXXXXXXXSRRWRYIWLSNPYINIXXXXXXXXXXXX 232
++ DRISSL + ++ I SFL + S++WRY++ ++
Sbjct: 4 VSRDRISSLPNPVVSHILSFLPTKEAASTSVLSKKWRYLFAYVTNLDFDDSDYQDGKPKS 63
Query: 233 XXXXXXKFINIVNQVLHRRRSSSIILKFSLTLSGWYFDRTWKVDEWVNSVLSRNVQEVSL 412
F+ V++VL + + S + KFSL S + D +V W+ +VL R V E+ L
Sbjct: 64 DVELSRSFMEFVDRVLALQGNGS-VNKFSLECSNYDVDLA-RVTGWILNVLGRGVSELDL 121
Query: 413 EAMDI----KYYTLKTLA----------------SEVKSLKLKRVCFVGVESE------- 511
++ + + KTL +V KLK + V+ +
Sbjct: 122 SILEYPLPSEIFVSKTLVRLKLGPANDLTLTLDRKDVFLPKLKTLYIDCVDVQERGFGFV 181
Query: 512 KLLLSSEVMETLVICKL--YLGKTLSISMPSVKHLLFNFGGESGCEPVHAEVHAPNLTLL 685
KLL V+E LV+ + K S+S+ ++K L F F E+ P PNL L
Sbjct: 182 KLLSGCPVLEELVLMNIGWENWKFCSVSVKTLKRLTF-FCEETYENPKSVSFDTPNLVYL 240
Query: 686 QIKGCICKGFSLENLSSIVTAEI----------DHDYC---WWRVKDQEKLENLAWCLTN 826
+ I + N +S+V A I D D+ ++ D++K + T+
Sbjct: 241 EYSDAIASKYPKVNFNSLVEAHIGLRLTEDQSGDADFSEEDYFSEGDEKK--QMVGNATD 298
Query: 827 ILKGLPNVKSLTLPANIFQAFTNLPNWSKEVLHKYHNLRYLKLRCWSCKSPANILGLVEL 1006
LKG+ V+ L L A + T + E + ++NL L + S L L
Sbjct: 299 FLKGISTVQILYLSAQAIEVLT----FCCEPIPVFNNLIQLTI---ENNSEIRWDSLPGL 351
Query: 1007 VVNIPHVETLVMER 1048
+ N P++ETLV++R
Sbjct: 352 LKNCPNLETLVLKR 365