BLASTX nr result

ID: Coptis25_contig00014876 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00014876
         (860 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270801.2| PREDICTED: uncharacterized protein LOC100243...    70   5e-10
gb|AAF99728.1|AC004557_7 F17L21.8 [Arabidopsis thaliana]               66   9e-09
gb|ACH87180.1| unknown protein [Camellia sinensis]                     66   9e-09
ref|XP_003630485.1| hypothetical protein MTR_8g097040 [Medicago ...    65   2e-08
ref|XP_003630483.1| hypothetical protein MTR_8g097040 [Medicago ...    65   2e-08

>ref|XP_002270801.2| PREDICTED: uncharacterized protein LOC100243721 [Vitis vinifera]
          Length = 127

 Score = 70.5 bits (171), Expect = 5e-10
 Identities = 36/53 (67%), Positives = 40/53 (75%), Gaps = 4/53 (7%)
 Frame = -1

Query: 458 SVTFVIGFILMPWVLALVIVLYFVGIVSNLSMLGRAILC----PCPPAVSSPS 312
           SVTF IGFILMPWVL LV+V YFVGIVSNLS+LGRAI+C    P  P    P+
Sbjct: 71  SVTFFIGFILMPWVLGLVMVFYFVGIVSNLSVLGRAIICQATAPAKPRKEIPA 123


>gb|AAF99728.1|AC004557_7 F17L21.8 [Arabidopsis thaliana]
          Length = 142

 Score = 66.2 bits (160), Expect = 9e-09
 Identities = 33/54 (61%), Positives = 40/54 (74%), Gaps = 2/54 (3%)
 Frame = -1

Query: 458 SVTFVIGFILMPWVLALVIVLYFVGIVSNLSMLGRAILC--PCPPAVSSPSIEG 303
           SVTF IGF+LMPWVLAL++V Y  GIVS +SM+GR+ILC    PP+ S   I G
Sbjct: 84  SVTFFIGFLLMPWVLALILVFYVAGIVSAISMVGRSILCYVLTPPSPSGKEISG 137


>gb|ACH87180.1| unknown protein [Camellia sinensis]
          Length = 129

 Score = 66.2 bits (160), Expect = 9e-09
 Identities = 34/53 (64%), Positives = 39/53 (73%), Gaps = 4/53 (7%)
 Frame = -1

Query: 458 SVTFVIGFILMPWVLALVIVLYFVGIVSNLSMLGRAILC----PCPPAVSSPS 312
           SVTF IGF+LMPWVL LV+V Y VGIVS+LSM+GRAILC    P  P    P+
Sbjct: 73  SVTFFIGFMLMPWVLGLVMVFYVVGIVSSLSMIGRAILCHTTSPASPRKEVPA 125


>ref|XP_003630485.1| hypothetical protein MTR_8g097040 [Medicago truncatula]
           gi|355524507|gb|AET04961.1| hypothetical protein
           MTR_8g097040 [Medicago truncatula]
          Length = 119

 Score = 65.5 bits (158), Expect = 2e-08
 Identities = 31/48 (64%), Positives = 37/48 (77%)
 Frame = -1

Query: 458 SVTFVIGFILMPWVLALVIVLYFVGIVSNLSMLGRAILCPCPPAVSSP 315
           SVTFVIGF+LMPWV+ LV+V Y  G+VS LS+LGR+ILC   P   SP
Sbjct: 67  SVTFVIGFMLMPWVIGLVMVFYVAGVVSFLSVLGRSILCFASPRKDSP 114


>ref|XP_003630483.1| hypothetical protein MTR_8g097040 [Medicago truncatula]
           gi|355524505|gb|AET04959.1| hypothetical protein
           MTR_8g097040 [Medicago truncatula]
          Length = 177

 Score = 65.5 bits (158), Expect = 2e-08
 Identities = 31/48 (64%), Positives = 37/48 (77%)
 Frame = -1

Query: 458 SVTFVIGFILMPWVLALVIVLYFVGIVSNLSMLGRAILCPCPPAVSSP 315
           SVTFVIGF+LMPWV+ LV+V Y  G+VS LS+LGR+ILC   P   SP
Sbjct: 79  SVTFVIGFMLMPWVIGLVMVFYVAGVVSFLSVLGRSILCFASPRKDSP 126


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