BLASTX nr result

ID: Coptis25_contig00014829 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00014829
         (1401 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002299569.1| predicted protein [Populus trichocarpa] gi|2...   499   e-139
gb|ABK92551.1| unknown [Populus trichocarpa]                          499   e-139
ref|XP_002282231.1| PREDICTED: homeobox protein knotted-1-like 7...   491   e-136
ref|XP_004143939.1| PREDICTED: homeobox protein knotted-1-like 7...   486   e-135
ref|XP_002509684.1| homeobox protein knotted-1, putative [Ricinu...   484   e-134

>ref|XP_002299569.1| predicted protein [Populus trichocarpa] gi|222846827|gb|EEE84374.1|
            predicted protein [Populus trichocarpa]
          Length = 293

 Score =  499 bits (1285), Expect = e-139
 Identities = 240/278 (86%), Positives = 262/278 (94%)
 Frame = +3

Query: 351  EASMSISGEDHRQLKSEIATHPLYEQLLSAHIGCLRVATPIDQLPLIDAQLAQSHHLLRF 530
            E S+S+SG+  RQLK+EIATHPLYEQLLSAH+ CLRVATPIDQLPLIDAQL+QSHHLLR 
Sbjct: 16   EMSVSLSGDQSRQLKAEIATHPLYEQLLSAHVSCLRVATPIDQLPLIDAQLSQSHHLLRS 75

Query: 531  YASQHHHQQHVLSPHEKQDLDNFLAQYMLVLCSFKEQLQQHVRVHAVEAVMGCREIEQSF 710
            YASQH+   H LSPHE+QDLDNFLAQY+++LC+FK+QLQQHVRVHAVEAVM CREIE + 
Sbjct: 76   YASQHNQHGHSLSPHERQDLDNFLAQYLIILCTFKDQLQQHVRVHAVEAVMACREIETTL 135

Query: 711  QALTGLSLSEGTGATMSDDEDELQMDLALDQSGGDGNDMMGFGPLLPTESERSLMERVRQ 890
            QALTG++L EGTGATMSDDED+LQMD +LDQS  DG+DMMGFGPLLPTESERSLMERVRQ
Sbjct: 136  QALTGVTLGEGTGATMSDDEDDLQMDFSLDQSSADGHDMMGFGPLLPTESERSLMERVRQ 195

Query: 891  ELKIELKQGFRSRIEDVREEILRKRRAGKLPGDTTSVLKNWWQQHSKWPYPTEDDKAKLV 1070
            ELKIELKQGF+SRIEDVREEILRKRRAGKLPGDTTSVLKNWWQQHSKWPYPTEDDKAKLV
Sbjct: 196  ELKIELKQGFKSRIEDVREEILRKRRAGKLPGDTTSVLKNWWQQHSKWPYPTEDDKAKLV 255

Query: 1071 EETGLQLKQINNWFINQRKRNWHSNSQSMTALKSKRKR 1184
            EETGLQLKQINNWFINQRKRNWHSNSQS+T+LKSKRKR
Sbjct: 256  EETGLQLKQINNWFINQRKRNWHSNSQSVTSLKSKRKR 293


>gb|ABK92551.1| unknown [Populus trichocarpa]
          Length = 301

 Score =  499 bits (1285), Expect = e-139
 Identities = 240/278 (86%), Positives = 262/278 (94%)
 Frame = +3

Query: 351  EASMSISGEDHRQLKSEIATHPLYEQLLSAHIGCLRVATPIDQLPLIDAQLAQSHHLLRF 530
            E S+S+SG+  RQLK+EIATHPLYEQLLSAH+ CLRVATPIDQLPLIDAQL+QSHHLLR 
Sbjct: 24   EMSVSLSGDQSRQLKAEIATHPLYEQLLSAHVSCLRVATPIDQLPLIDAQLSQSHHLLRS 83

Query: 531  YASQHHHQQHVLSPHEKQDLDNFLAQYMLVLCSFKEQLQQHVRVHAVEAVMGCREIEQSF 710
            YASQH+   H LSPHE+QDLDNFLAQY+++LC+FK+QLQQHVRVHAVEAVM CREIE + 
Sbjct: 84   YASQHNQHGHSLSPHERQDLDNFLAQYLIILCTFKDQLQQHVRVHAVEAVMACREIETTL 143

Query: 711  QALTGLSLSEGTGATMSDDEDELQMDLALDQSGGDGNDMMGFGPLLPTESERSLMERVRQ 890
            QALTG++L EGTGATMSDDED+LQMD +LDQS  DG+DMMGFGPLLPTESERSLMERVRQ
Sbjct: 144  QALTGVTLGEGTGATMSDDEDDLQMDFSLDQSSADGHDMMGFGPLLPTESERSLMERVRQ 203

Query: 891  ELKIELKQGFRSRIEDVREEILRKRRAGKLPGDTTSVLKNWWQQHSKWPYPTEDDKAKLV 1070
            ELKIELKQGF+SRIEDVREEILRKRRAGKLPGDTTSVLKNWWQQHSKWPYPTEDDKAKLV
Sbjct: 204  ELKIELKQGFKSRIEDVREEILRKRRAGKLPGDTTSVLKNWWQQHSKWPYPTEDDKAKLV 263

Query: 1071 EETGLQLKQINNWFINQRKRNWHSNSQSMTALKSKRKR 1184
            EETGLQLKQINNWFINQRKRNWHSNSQS+T+LKSKRKR
Sbjct: 264  EETGLQLKQINNWFINQRKRNWHSNSQSVTSLKSKRKR 301


>ref|XP_002282231.1| PREDICTED: homeobox protein knotted-1-like 7 [Vitis vinifera]
            gi|297742619|emb|CBI34768.3| unnamed protein product
            [Vitis vinifera]
          Length = 291

 Score =  491 bits (1263), Expect = e-136
 Identities = 236/275 (85%), Positives = 256/275 (93%)
 Frame = +3

Query: 360  MSISGEDHRQLKSEIATHPLYEQLLSAHIGCLRVATPIDQLPLIDAQLAQSHHLLRFYAS 539
            +S   +  RQLK EI THPLYEQLL+AH+ CLRVATPIDQLPLIDAQL QSHHLLR YAS
Sbjct: 17   LSDGDQQQRQLKGEIVTHPLYEQLLAAHVACLRVATPIDQLPLIDAQLTQSHHLLRSYAS 76

Query: 540  QHHHQQHVLSPHEKQDLDNFLAQYMLVLCSFKEQLQQHVRVHAVEAVMGCREIEQSFQAL 719
            Q HH  + LSPHE+Q+LDNFL+QY+LVLC+FKEQLQQHVRVHAVEAVM CREIEQ+ QAL
Sbjct: 77   QQHHHGNSLSPHERQELDNFLSQYLLVLCTFKEQLQQHVRVHAVEAVMACREIEQTLQAL 136

Query: 720  TGLSLSEGTGATMSDDEDELQMDLALDQSGGDGNDMMGFGPLLPTESERSLMERVRQELK 899
            TG+SL EG+GATMSDDE+E+QMD +LDQ GGDG+DMMGFGPLLPTESER+LMERVRQELK
Sbjct: 137  TGVSLGEGSGATMSDDEEEMQMDFSLDQGGGDGHDMMGFGPLLPTESERTLMERVRQELK 196

Query: 900  IELKQGFRSRIEDVREEILRKRRAGKLPGDTTSVLKNWWQQHSKWPYPTEDDKAKLVEET 1079
            IELKQGF+SRIEDVREEILRKRRAGKLPGDTTSVLKNWWQQHSKWPYPTEDDKAKLVEET
Sbjct: 197  IELKQGFKSRIEDVREEILRKRRAGKLPGDTTSVLKNWWQQHSKWPYPTEDDKAKLVEET 256

Query: 1080 GLQLKQINNWFINQRKRNWHSNSQSMTALKSKRKR 1184
            GLQLKQINNWFINQRKRNWHSNSQS+TALKSKRKR
Sbjct: 257  GLQLKQINNWFINQRKRNWHSNSQSVTALKSKRKR 291


>ref|XP_004143939.1| PREDICTED: homeobox protein knotted-1-like 7-like [Cucumis sativus]
            gi|449495874|ref|XP_004159970.1| PREDICTED: homeobox
            protein knotted-1-like 7-like [Cucumis sativus]
          Length = 301

 Score =  486 bits (1251), Expect = e-135
 Identities = 236/280 (84%), Positives = 258/280 (92%), Gaps = 2/280 (0%)
 Frame = +3

Query: 351  EASMSISGEDHRQLKSEIATHPLYEQLLSAHIGCLRVATPIDQLPLIDAQLAQSHHLLRF 530
            + S+S  G  + QLK+EIATHPLYEQLLSAH+ CLRVATPIDQLP+IDAQL+QSHH+LR 
Sbjct: 22   DVSVSGEGVHNSQLKAEIATHPLYEQLLSAHVACLRVATPIDQLPMIDAQLSQSHHILRS 81

Query: 531  YAS--QHHHQQHVLSPHEKQDLDNFLAQYMLVLCSFKEQLQQHVRVHAVEAVMGCREIEQ 704
            YAS  QHH   H L+PHE+Q+LDNFLAQYM+VLCSFKEQLQQHVRVHAVEAVM CREIE 
Sbjct: 82   YASSQQHHQNAHSLTPHERQELDNFLAQYMIVLCSFKEQLQQHVRVHAVEAVMACREIEN 141

Query: 705  SFQALTGLSLSEGTGATMSDDEDELQMDLALDQSGGDGNDMMGFGPLLPTESERSLMERV 884
            + QALTG+SL EGTGATMSDDED++ MD +LDQSG D +DMMGFGPLLPTESERSLMERV
Sbjct: 142  TLQALTGVSLGEGTGATMSDDEDDIPMDFSLDQSGADAHDMMGFGPLLPTESERSLMERV 201

Query: 885  RQELKIELKQGFRSRIEDVREEILRKRRAGKLPGDTTSVLKNWWQQHSKWPYPTEDDKAK 1064
            RQELKIELKQGF+SRIEDVREEILRKRRAGKLPGDTT+VLKNWWQQHSKWPYPTEDDKAK
Sbjct: 202  RQELKIELKQGFKSRIEDVREEILRKRRAGKLPGDTTTVLKNWWQQHSKWPYPTEDDKAK 261

Query: 1065 LVEETGLQLKQINNWFINQRKRNWHSNSQSMTALKSKRKR 1184
            LVEETGLQLKQINNWFINQRKRNWHSNSQS+T+LKSKRKR
Sbjct: 262  LVEETGLQLKQINNWFINQRKRNWHSNSQSVTSLKSKRKR 301


>ref|XP_002509684.1| homeobox protein knotted-1, putative [Ricinus communis]
            gi|223549583|gb|EEF51071.1| homeobox protein knotted-1,
            putative [Ricinus communis]
          Length = 302

 Score =  484 bits (1247), Expect = e-134
 Identities = 234/273 (85%), Positives = 256/273 (93%)
 Frame = +3

Query: 366  ISGEDHRQLKSEIATHPLYEQLLSAHIGCLRVATPIDQLPLIDAQLAQSHHLLRFYASQH 545
            +SG+  RQLK+EIA HPLYEQLLSAH+ CLRVATPIDQLPLIDAQL+QSHHL+R YASQH
Sbjct: 33   VSGDQTRQLKAEIANHPLYEQLLSAHVSCLRVATPIDQLPLIDAQLSQSHHLIRSYASQH 92

Query: 546  HHQQHVLSPHEKQDLDNFLAQYMLVLCSFKEQLQQHVRVHAVEAVMGCREIEQSFQALTG 725
             H    LSPHE+Q+LDNFLAQY++VLCSFK+QLQQHVRVHAVEAVM CREIE +  ALTG
Sbjct: 93   PHP---LSPHERQELDNFLAQYLIVLCSFKDQLQQHVRVHAVEAVMACREIENTLHALTG 149

Query: 726  LSLSEGTGATMSDDEDELQMDLALDQSGGDGNDMMGFGPLLPTESERSLMERVRQELKIE 905
            ++L EGTGATMSDDED+LQMD +LDQSG DG+D+MGFGPLLPTESERSLMERVRQELKIE
Sbjct: 150  VTLGEGTGATMSDDEDDLQMDFSLDQSGADGHDLMGFGPLLPTESERSLMERVRQELKIE 209

Query: 906  LKQGFRSRIEDVREEILRKRRAGKLPGDTTSVLKNWWQQHSKWPYPTEDDKAKLVEETGL 1085
            LKQGF+SRIEDVREEILRKRRAGKLPGDTT+VLKNWWQQHSKWPYPTEDDKAKLVEETGL
Sbjct: 210  LKQGFKSRIEDVREEILRKRRAGKLPGDTTTVLKNWWQQHSKWPYPTEDDKAKLVEETGL 269

Query: 1086 QLKQINNWFINQRKRNWHSNSQSMTALKSKRKR 1184
            QLKQINNWFINQRKRNWHSNSQS+T+LKSKRKR
Sbjct: 270  QLKQINNWFINQRKRNWHSNSQSVTSLKSKRKR 302


Top