BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00014823
         (389 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEL30359.1| RNA-directed DNA polymerase [Arachis hypogaea]          84   2e-14
emb|CCA66009.1| hypothetical protein [Beta vulgaris subsp. vulga...    82   3e-14
emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulga...    79   5e-13
emb|CAB78008.1| putative protein [Arabidopsis thaliana] gi|73210...    77   1e-12
gb|AFP55557.1| non-ltr retroelement reverse transcriptase [Rosa ...    75   4e-12

>gb|AEL30359.1| RNA-directed DNA polymerase [Arachis hypogaea]
          Length = 1613

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 43/119 (36%), Positives = 64/119 (53%)
 Frame = +1

Query: 28   VSHLMYADDTIICSKMELEAIANLKYILDTYCTASGQEINSSKSQIIHHKKLPXXXXXXX 207
            +SHLM+ADD ++  K     + N+  +L+T+C A G +IN  KS+ +  K +        
Sbjct: 1009 ISHLMFADDLLLFCKATKRQVQNVMLVLETFCKAYGMKINVEKSKALCSKNVSATRKEVF 1068

Query: 208  XXXXKIPCTHQFPTYLGVSADLGQRTKSQFQPLIDKFHSKLAGWKGSLLSKPGRLTLVN 384
                 I        YLGV+    + T+  F  ++DK  S+LA WKGSLL++ GRL LVN
Sbjct: 1069 TGISSIIFVQDLGKYLGVTLSHSRVTRLAFNGVLDKIRSRLASWKGSLLNRAGRLCLVN 1127


>emb|CCA66009.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1378

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 44/129 (34%), Positives = 67/129 (51%)
 Frame = +1

Query: 1    IKLAPRTQAVSHLMYADDTIICSKMELEAIANLKYILDTYCTASGQEINSSKSQIIHHKK 180
            +K +     +S+L +ADD I+ S+  +E    +K+ LD +C ASG ++N  KS+I     
Sbjct: 673  VKASRNGPPISNLAFADDLILFSEASVEQAQVMKWCLDRFCEASGSKVNEDKSKIYFSAN 732

Query: 181  LPXXXXXXXXXXXKIPCTHQFPTYLGVSADLGQRTKSQFQPLIDKFHSKLAGWKGSLLSK 360
                          +  T  F  YLGV    G+ +K ++Q L+D+ + KLAGWK   LS 
Sbjct: 733  THLDIRDAVCNTLAMEATADFGKYLGVPTINGRSSKREYQYLVDRINGKLAGWKTKTLSI 792

Query: 361  PGRLTLVNS 387
             GR TL+ S
Sbjct: 793  AGRATLIQS 801


>emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1369

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 41/129 (31%), Positives = 64/129 (49%)
 Frame = +1

Query: 1    IKLAPRTQAVSHLMYADDTIICSKMELEAIANLKYILDTYCTASGQEINSSKSQIIHHKK 180
            +K+  R   +SHL +ADD+++  +   E + N+  IL TY  ASGQ++N  KS++ + + 
Sbjct: 676  VKIGHRVSPISHLFFADDSLLFIRATEEEVENVMDILSTYEAASGQKLNMEKSEMSYSRN 735

Query: 181  LPXXXXXXXXXXXKIPCTHQFPTYLGVSADLGQRTKSQFQPLIDKFHSKLAGWKGSLLSK 360
            L                      YLG+   +G   K  FQ + D+   KL GWKG  LS+
Sbjct: 736  LEPDKINTLQMKLAFKTVEGHEKYLGLPTFIGSSKKRVFQAIQDRVWKKLKGWKGKYLSQ 795

Query: 361  PGRLTLVNS 387
             GR  L+ +
Sbjct: 796  AGREVLIKA 804


>emb|CAB78008.1| putative protein [Arabidopsis thaliana] gi|7321072|emb|CAB82119.1|
           putative protein [Arabidopsis thaliana]
          Length = 947

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 41/120 (34%), Positives = 65/120 (54%)
 Frame = +1

Query: 28  VSHLMYADDTIICSKMELEAIANLKYILDTYCTASGQEINSSKSQIIHHKKLPXXXXXXX 207
           +SH+ +ADD I+ ++  +  I  ++ IL+T+C ASGQ+++  KS+I   K +        
Sbjct: 353 ISHICFADDLILFAEASVSQIRVIRRILETFCIASGQKVSLDKSKIFFSKNVSRDLEKLI 412

Query: 208 XXXXKIPCTHQFPTYLGVSADLGQRTKSQFQPLIDKFHSKLAGWKGSLLSKPGRLTLVNS 387
                I  T +   YLG+     +  K  F  ++++  S+LAGWKG  LS  GRLTL  S
Sbjct: 413 SKESGIKSTRELGKYLGMPILQRRINKDTFGEVLERVSSRLAGWKGRSLSFAGRLTLTKS 472


>gb|AFP55557.1| non-ltr retroelement reverse transcriptase [Rosa rugosa]
          Length = 1747

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 44/129 (34%), Positives = 63/129 (48%)
 Frame = +1

Query: 1    IKLAPRTQAVSHLMYADDTIICSKMELEAIANLKYILDTYCTASGQEINSSKSQIIHHKK 180
            + +A    +VSHL YADD+++     +     LK I  TY  ASGQ+IN  KS I    K
Sbjct: 955  VAIARGAPSVSHLFYADDSLLFCDATVTDCMALKNIFSTYEAASGQKINKDKSAICFSPK 1014

Query: 181  LPXXXXXXXXXXXKIPCTHQFPTYLGVSADLGQRTKSQFQPLIDKFHSKLAGWKGSLLSK 360
             P            +P       YLG+    G+  K  FQ L D+  +++ GW+G LLSK
Sbjct: 1015 SPAAIKEACSAILDMPVVPCHERYLGLPTVSGKDKKKLFQSLPDRVWNRVHGWEGKLLSK 1074

Query: 361  PGRLTLVNS 387
             G+  L+ +
Sbjct: 1075 AGKEVLIKT 1083