BLASTX nr result

ID: Coptis25_contig00014817 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00014817
         (472 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002517429.1| nop14, putative [Ricinus communis] gi|223543...    72   6e-11
emb|CBI27323.3| unnamed protein product [Vitis vinifera]               71   8e-11
ref|XP_002273322.1| PREDICTED: nucleolar protein 14-like [Vitis ...    71   8e-11
emb|CAN71711.1| hypothetical protein VITISV_013458 [Vitis vinifera]    71   8e-11
ref|XP_002888698.1| hypothetical protein ARALYDRAFT_339148 [Arab...    68   7e-10

>ref|XP_002517429.1| nop14, putative [Ricinus communis] gi|223543440|gb|EEF44971.1|
           nop14, putative [Ricinus communis]
          Length = 865

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 39/54 (72%), Positives = 44/54 (81%), Gaps = 3/54 (5%)
 Frame = -3

Query: 332 LLSKFQV--NKKPLDFKLLNLLVKPLMEMSMDTPYFVA-CARRRIHHTRAQFCE 180
           LL  F V  NKKPL+F+LLNLLVKPL+EMSM+ PYF A CAR+RI  TRAQFCE
Sbjct: 480 LLQYFAVLANKKPLNFELLNLLVKPLIEMSMEIPYFSAICARQRILRTRAQFCE 533


>emb|CBI27323.3| unnamed protein product [Vitis vinifera]
          Length = 899

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 40/65 (61%), Positives = 47/65 (72%), Gaps = 3/65 (4%)
 Frame = -3

Query: 332 LLSKFQV--NKKPLDFKLLNLLVKPLMEMSMDTPYFVA-CARRRIHHTRAQFCEVTRQFQ 162
           LL  F V  NKKPL+FKLLNLLVKPLME+S++ PYF A CAR+RI  TR QFCE  +  +
Sbjct: 514 LLQYFAVLANKKPLNFKLLNLLVKPLMEISVEIPYFAAICARQRILRTRMQFCEAIKIPE 573

Query: 161 KLVLP 147
           K   P
Sbjct: 574 KSSWP 578


>ref|XP_002273322.1| PREDICTED: nucleolar protein 14-like [Vitis vinifera]
          Length = 973

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 40/65 (61%), Positives = 47/65 (72%), Gaps = 3/65 (4%)
 Frame = -3

Query: 332 LLSKFQV--NKKPLDFKLLNLLVKPLMEMSMDTPYFVA-CARRRIHHTRAQFCEVTRQFQ 162
           LL  F V  NKKPL+FKLLNLLVKPLME+S++ PYF A CAR+RI  TR QFCE  +  +
Sbjct: 591 LLQYFAVLANKKPLNFKLLNLLVKPLMEISVEIPYFAAICARQRILRTRMQFCEAIKIPE 650

Query: 161 KLVLP 147
           K   P
Sbjct: 651 KSSWP 655


>emb|CAN71711.1| hypothetical protein VITISV_013458 [Vitis vinifera]
          Length = 815

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 40/65 (61%), Positives = 47/65 (72%), Gaps = 3/65 (4%)
 Frame = -3

Query: 332 LLSKFQV--NKKPLDFKLLNLLVKPLMEMSMDTPYFVA-CARRRIHHTRAQFCEVTRQFQ 162
           LL  F V  NKKPL+FKLLNLLVKPLME+S++ PYF A CAR+RI  TR QFCE  +  +
Sbjct: 430 LLQYFAVLANKKPLNFKLLNLLVKPLMEISVEIPYFAAICARQRILRTRMQFCEAIKIPE 489

Query: 161 KLVLP 147
           K   P
Sbjct: 490 KSSWP 494


>ref|XP_002888698.1| hypothetical protein ARALYDRAFT_339148 [Arabidopsis lyrata subsp.
           lyrata] gi|297334539|gb|EFH64957.1| hypothetical protein
           ARALYDRAFT_339148 [Arabidopsis lyrata subsp. lyrata]
          Length = 901

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 36/57 (63%), Positives = 44/57 (77%), Gaps = 3/57 (5%)
 Frame = -3

Query: 332 LLSKFQV--NKKPLDFKLLNLLVKPLMEMSMDTPYFVA-CARRRIHHTRAQFCEVTR 171
           LL  F V  +KKPL+F LLN+LVKPL+EMSM+ PYF A CAR+R+  TRAQFCE  +
Sbjct: 514 LLQYFAVLTSKKPLNFDLLNMLVKPLIEMSMEIPYFAAICARQRLLKTRAQFCEAIK 570


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