BLASTX nr result

ID: Coptis25_contig00014808 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00014808
         (633 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278964.2| PREDICTED: flap endonuclease 1-like [Vitis v...   302   3e-80
emb|CBI39682.3| unnamed protein product [Vitis vinifera]              302   3e-80
ref|XP_004135764.1| PREDICTED: flap endonuclease 1-like [Cucumis...   301   7e-80
ref|XP_003555770.1| PREDICTED: flap endonuclease 1-like [Glycine...   301   7e-80
ref|NP_001242313.1| flap endonuclease 1 [Glycine max] gi|3173761...   301   7e-80

>ref|XP_002278964.2| PREDICTED: flap endonuclease 1-like [Vitis vinifera]
          Length = 384

 Score =  302 bits (774), Expect = 3e-80
 Identities = 151/162 (93%), Positives = 158/162 (97%)
 Frame = +3

Query: 147 MGIKGLTKLLADNAPKCMKEQKFESFFGRKIAIDASMSIYQFLIVVGRSGTEMLTNEAGE 326
           MGIKGLTKLLADNAPK MKEQKFESFFGRKIAIDASMSIYQFLIVVGRSGTEMLTNEAGE
Sbjct: 1   MGIKGLTKLLADNAPKAMKEQKFESFFGRKIAIDASMSIYQFLIVVGRSGTEMLTNEAGE 60

Query: 327 VTSHLQGMFSRTIRLLEAGIKPAYVFDGKPPDLKKQELAKRYSKRADATEDLAEAIETGE 506
           VTSHLQGMFSRTIRLLEAG+KP YVFDGKPPDLKKQELAKR+S+RADATEDL EA+ETG 
Sbjct: 61  VTSHLQGMFSRTIRLLEAGLKPVYVFDGKPPDLKKQELAKRFSRRADATEDLTEALETGN 120

Query: 507 KEDIEKFSKRTVKVTKQHNDDCKKLLRLMGVPVVEAPSEAEA 632
           KE+IEKFSKRTVKVTKQHN+DCKKLLRLMGVPV+EAPSEAEA
Sbjct: 121 KEEIEKFSKRTVKVTKQHNEDCKKLLRLMGVPVIEAPSEAEA 162


>emb|CBI39682.3| unnamed protein product [Vitis vinifera]
          Length = 416

 Score =  302 bits (774), Expect = 3e-80
 Identities = 151/162 (93%), Positives = 158/162 (97%)
 Frame = +3

Query: 147 MGIKGLTKLLADNAPKCMKEQKFESFFGRKIAIDASMSIYQFLIVVGRSGTEMLTNEAGE 326
           MGIKGLTKLLADNAPK MKEQKFESFFGRKIAIDASMSIYQFLIVVGRSGTEMLTNEAGE
Sbjct: 1   MGIKGLTKLLADNAPKAMKEQKFESFFGRKIAIDASMSIYQFLIVVGRSGTEMLTNEAGE 60

Query: 327 VTSHLQGMFSRTIRLLEAGIKPAYVFDGKPPDLKKQELAKRYSKRADATEDLAEAIETGE 506
           VTSHLQGMFSRTIRLLEAG+KP YVFDGKPPDLKKQELAKR+S+RADATEDL EA+ETG 
Sbjct: 61  VTSHLQGMFSRTIRLLEAGLKPVYVFDGKPPDLKKQELAKRFSRRADATEDLTEALETGN 120

Query: 507 KEDIEKFSKRTVKVTKQHNDDCKKLLRLMGVPVVEAPSEAEA 632
           KE+IEKFSKRTVKVTKQHN+DCKKLLRLMGVPV+EAPSEAEA
Sbjct: 121 KEEIEKFSKRTVKVTKQHNEDCKKLLRLMGVPVIEAPSEAEA 162


>ref|XP_004135764.1| PREDICTED: flap endonuclease 1-like [Cucumis sativus]
          Length = 377

 Score =  301 bits (771), Expect = 7e-80
 Identities = 151/162 (93%), Positives = 158/162 (97%)
 Frame = +3

Query: 147 MGIKGLTKLLADNAPKCMKEQKFESFFGRKIAIDASMSIYQFLIVVGRSGTEMLTNEAGE 326
           MGIKGLTKLLADNAPK MKEQKFE++FGRKIAIDASMSIYQFLIVVGRSGTEMLTNEAGE
Sbjct: 1   MGIKGLTKLLADNAPKGMKEQKFEAYFGRKIAIDASMSIYQFLIVVGRSGTEMLTNEAGE 60

Query: 327 VTSHLQGMFSRTIRLLEAGIKPAYVFDGKPPDLKKQELAKRYSKRADATEDLAEAIETGE 506
           VTSHLQGMF+RTIRLLEAGIKP YVFDGKPPDLKKQELAKRYSKRADATEDLA+AIE G 
Sbjct: 61  VTSHLQGMFNRTIRLLEAGIKPVYVFDGKPPDLKKQELAKRYSKRADATEDLADAIEVGN 120

Query: 507 KEDIEKFSKRTVKVTKQHNDDCKKLLRLMGVPVVEAPSEAEA 632
           K+DIEKFSKRTVKVTKQHNDDCK+LLRLMGVPV+EAPSEAEA
Sbjct: 121 KDDIEKFSKRTVKVTKQHNDDCKRLLRLMGVPVIEAPSEAEA 162


>ref|XP_003555770.1| PREDICTED: flap endonuclease 1-like [Glycine max]
          Length = 382

 Score =  301 bits (771), Expect = 7e-80
 Identities = 152/162 (93%), Positives = 157/162 (96%)
 Frame = +3

Query: 147 MGIKGLTKLLADNAPKCMKEQKFESFFGRKIAIDASMSIYQFLIVVGRSGTEMLTNEAGE 326
           MGIKGLTKLLADNAPK MKE KFES+FGRKIAIDASMSIYQFLIVVGRSGTEMLTNEAGE
Sbjct: 1   MGIKGLTKLLADNAPKSMKENKFESYFGRKIAIDASMSIYQFLIVVGRSGTEMLTNEAGE 60

Query: 327 VTSHLQGMFSRTIRLLEAGIKPAYVFDGKPPDLKKQELAKRYSKRADATEDLAEAIETGE 506
           VTSHLQGMFSRTIRLLEAGIKP YVFDGKPPDLKKQELAKRYSKRA+ATEDL+EA+ET  
Sbjct: 61  VTSHLQGMFSRTIRLLEAGIKPVYVFDGKPPDLKKQELAKRYSKRAEATEDLSEALETAN 120

Query: 507 KEDIEKFSKRTVKVTKQHNDDCKKLLRLMGVPVVEAPSEAEA 632
           KEDIEKFSKRTVKVTKQHNDDCK+LLRLMGVPVVEAPSEAEA
Sbjct: 121 KEDIEKFSKRTVKVTKQHNDDCKRLLRLMGVPVVEAPSEAEA 162


>ref|NP_001242313.1| flap endonuclease 1 [Glycine max]
           gi|317376195|sp|C6TEX6.1|FEN1_SOYBN RecName: Full=Flap
           endonuclease 1; Short=FEN-1; AltName: Full=Flap
           structure-specific endonuclease 1
           gi|255640175|gb|ACU20378.1| unknown [Glycine max]
          Length = 382

 Score =  301 bits (771), Expect = 7e-80
 Identities = 152/162 (93%), Positives = 157/162 (96%)
 Frame = +3

Query: 147 MGIKGLTKLLADNAPKCMKEQKFESFFGRKIAIDASMSIYQFLIVVGRSGTEMLTNEAGE 326
           MGIKGLTKLLADNAPK MKE KFES+FGRKIAIDASMSIYQFLIVVGRSGTEMLTNEAGE
Sbjct: 1   MGIKGLTKLLADNAPKSMKENKFESYFGRKIAIDASMSIYQFLIVVGRSGTEMLTNEAGE 60

Query: 327 VTSHLQGMFSRTIRLLEAGIKPAYVFDGKPPDLKKQELAKRYSKRADATEDLAEAIETGE 506
           VTSHLQGMFSRTIRLLEAGIKP YVFDGKPPDLKKQELAKRYSKRA+ATEDL+EA+ET  
Sbjct: 61  VTSHLQGMFSRTIRLLEAGIKPVYVFDGKPPDLKKQELAKRYSKRAEATEDLSEALETAN 120

Query: 507 KEDIEKFSKRTVKVTKQHNDDCKKLLRLMGVPVVEAPSEAEA 632
           KEDIEKFSKRTVKVTKQHNDDCK+LLRLMGVPVVEAPSEAEA
Sbjct: 121 KEDIEKFSKRTVKVTKQHNDDCKRLLRLMGVPVVEAPSEAEA 162


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