BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00014807
         (412 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277519.1| PREDICTED: F-box protein SKIP1 [Vitis vinifera]   147   7e-34
ref|XP_003519157.1| PREDICTED: F-box protein SKIP1-like isoform ...   136   2e-30
ref|XP_002529409.1| F-box/LRR-repeat protein, putative [Ricinus ...   136   2e-30
gb|ACU18806.1| unknown [Glycine max]                                  135   3e-30
ref|XP_003519156.1| PREDICTED: F-box protein SKIP1-like isoform ...   134   6e-30

>ref|XP_002277519.1| PREDICTED: F-box protein SKIP1 [Vitis vinifera]
          Length = 308

 Score =  147 bits (372), Expect = 7e-34
 Identities = 64/100 (64%), Positives = 76/100 (76%)
 Frame = +1

Query: 112 LTHELLTNILTRLSIEDRWKGSMFVCKSWFQACKDPSLFSVFNLEPFFESGTESPLWWAP 291
           LTHE LTN+L+RL++ DRW G M VCKSW  ACKDPSLFS  +LE  F+S TES  WW P
Sbjct: 19  LTHECLTNVLSRLTLHDRWTGPMLVCKSWLHACKDPSLFSTLDLEVHFDSPTESARWWTP 78

Query: 292 SFERKIDCMLRNVVYWSGGDLNEIRIRHCSDHSVNFVAQR 411
            FERKID MLR++  WSGG + EIR+RHCSD S++F A R
Sbjct: 79  EFERKIDAMLRSIAEWSGGSITEIRVRHCSDRSLSFAADR 118


>ref|XP_003519157.1| PREDICTED: F-box protein SKIP1-like isoform 2 [Glycine max]
          Length = 296

 Score =  136 bits (343), Expect = 2e-30
 Identities = 64/100 (64%), Positives = 74/100 (74%)
 Frame = +1

Query: 112 LTHELLTNILTRLSIEDRWKGSMFVCKSWFQACKDPSLFSVFNLEPFFESGTESPLWWAP 291
           LT E L NIL+RLS+EDRW+G+M VCKSWF   K+PSL  VFNL+P F+S TES  WW P
Sbjct: 17  LTRECLINILSRLSVEDRWRGTMLVCKSWFSVFKEPSLHFVFNLDPQFDSPTESTRWWTP 76

Query: 292 SFERKIDCMLRNVVYWSGGDLNEIRIRHCSDHSVNFVAQR 411
            FE KID MLR+VV W+   L  IRIRHCSD S+  VAQR
Sbjct: 77  EFEAKIDNMLRSVVEWAQSSLTHIRIRHCSDRSLALVAQR 116


>ref|XP_002529409.1| F-box/LRR-repeat protein, putative [Ricinus communis]
           gi|223531157|gb|EEF33005.1| F-box/LRR-repeat protein,
           putative [Ricinus communis]
          Length = 313

 Score =  136 bits (343), Expect = 2e-30
 Identities = 63/100 (63%), Positives = 77/100 (77%)
 Frame = +1

Query: 112 LTHELLTNILTRLSIEDRWKGSMFVCKSWFQACKDPSLFSVFNLEPFFESGTESPLWWAP 291
           LT+E L NIL+RL++E R  G M VCKSW  ACKDPSL+ +FNLE  F S TES  WW P
Sbjct: 24  LTYECLINILSRLTLEHRCLGPMLVCKSWLNACKDPSLYKIFNLETQFNSTTESSRWWTP 83

Query: 292 SFERKIDCMLRNVVYWSGGDLNEIRIRHCSDHSVNFVAQR 411
           +FER+ID MLR++V +S G+L EIR RHCSD S+NFVA+R
Sbjct: 84  NFERQIDSMLRSIVVYSYGNLTEIRTRHCSDFSINFVAER 123


>gb|ACU18806.1| unknown [Glycine max]
          Length = 296

 Score =  135 bits (341), Expect = 3e-30
 Identities = 64/100 (64%), Positives = 73/100 (73%)
 Frame = +1

Query: 112 LTHELLTNILTRLSIEDRWKGSMFVCKSWFQACKDPSLFSVFNLEPFFESGTESPLWWAP 291
           LT E L NIL RLS+EDRW+G+M VCKSWF   K+PSL  VFNL+P F+S TES  WW P
Sbjct: 17  LTRECLINILPRLSVEDRWRGTMLVCKSWFSVFKEPSLHFVFNLDPQFDSPTESTRWWTP 76

Query: 292 SFERKIDCMLRNVVYWSGGDLNEIRIRHCSDHSVNFVAQR 411
            FE KID MLR+VV W+   L  IRIRHCSD S+  VAQR
Sbjct: 77  EFEAKIDNMLRSVVEWAQSSLTHIRIRHCSDRSLALVAQR 116


>ref|XP_003519156.1| PREDICTED: F-box protein SKIP1-like isoform 1 [Glycine max]
          Length = 306

 Score =  134 bits (338), Expect = 6e-30
 Identities = 63/99 (63%), Positives = 73/99 (73%)
 Frame = +1

Query: 112 LTHELLTNILTRLSIEDRWKGSMFVCKSWFQACKDPSLFSVFNLEPFFESGTESPLWWAP 291
           LT E L NIL+RLS+EDRW+G+M VCKSWF   K+PSL  VFNL+P F+S TES  WW P
Sbjct: 17  LTRECLINILSRLSVEDRWRGTMLVCKSWFSVFKEPSLHFVFNLDPQFDSPTESTRWWTP 76

Query: 292 SFERKIDCMLRNVVYWSGGDLNEIRIRHCSDHSVNFVAQ 408
            FE KID MLR+VV W+   L  IRIRHCSD S+  VAQ
Sbjct: 77  EFEAKIDNMLRSVVEWAQSSLTHIRIRHCSDRSLALVAQ 115