BLASTX nr result
ID: Coptis25_contig00014802
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00014802
(891 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABI34394.1| Mutator transposable element-related protein, put... 62 1e-16
gb|AAC26234.1| contains similarity to maize transposon MuDR (GB:... 50 8e-16
ref|XP_002466925.1| hypothetical protein SORBIDRAFT_01g016800 [S... 49 4e-15
gb|ABA97240.1| transposon protein, putative, Mutator sub-class [... 55 2e-14
emb|CAH67772.1| H0322F07.9 [Oryza sativa Indica Group] gi|903991... 50 9e-14
>gb|ABI34394.1| Mutator transposable element-related protein, putative [Solanum
tuberosum]
Length = 616
Score = 61.6 bits (148), Expect(3) = 1e-16
Identities = 33/92 (35%), Positives = 50/92 (54%), Gaps = 1/92 (1%)
Frame = -1
Query: 462 EAGAKDYLMNEDPRLWVRSHFDHIVKSDHLSNNFTEVGNSRILEARDKPIGKMISVIMIL 283
+ A D+L +++P W RSH K D L NN EV NS I +ARDKPI ++ + L
Sbjct: 101 DPNAVDWLNDKEPSQWSRSHLSSDAKCDILLNNICEVFNSMIFDARDKPIVTLLEKLRYL 160
Query: 282 QMKLLFDRKERSITWIDPFV-PRVMDIIRKRK 190
M + +E++ W V P++ DI+ K +
Sbjct: 161 LMARMLANREKAHKWSSNDVCPKIKDILHKNQ 192
Score = 45.4 bits (106), Expect(3) = 1e-16
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Frame = -2
Query: 197 KEKNELGDLHVGGSDDGKF-LVTHTFGKWWYVDLQRRTCDCNEWQVTGIVCAHAVAVIKP 21
K + G+ S+ K+ ++ T W VDL+ R C C +W + GI C HA+A I+
Sbjct: 190 KNQTAAGEYIPRKSNQRKYEIIGATIHDSWAVDLENRICSCTKWSIMGIPCKHAIAAIRA 249
Query: 20 RR 15
++
Sbjct: 250 KK 251
Score = 25.8 bits (55), Expect(3) = 1e-16
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = -2
Query: 647 QKGLNNALVSVFPHCNQRFCFRHM 576
++ L A V P+ N RFC RH+
Sbjct: 37 KESLIEAFNEVLPYVNHRFCARHL 60
>gb|AAC26234.1| contains similarity to maize transposon MuDR (GB:M76978)
[Arabidopsis thaliana]
Length = 940
Score = 50.1 bits (118), Expect(3) = 8e-16
Identities = 28/99 (28%), Positives = 47/99 (47%)
Frame = -1
Query: 483 MDVI*KREAGAKDYLMNEDPRLWVRSHFDHIVKSDHLSNNFTEVGNSRILEARDKPIGKM 304
MD + + A D L+ DP W R+ F + +SNN +E N I EAR P+ M
Sbjct: 562 MDALRSYDPDACDDLLKTDPTTWCRAFFSTHSSCEDVSNNLSESFNRTIREARKLPVVNM 621
Query: 303 ISVIMILQMKLLFDRKERSITWIDPFVPRVMDIIRKRKK 187
+ + + MK + +++ F P++M I+ +K
Sbjct: 622 LEEVRRISMKRISKLCDKTAKCETRFPPKIMQILEGNRK 660
Score = 44.3 bits (103), Expect(3) = 8e-16
Identities = 20/44 (45%), Positives = 28/44 (63%)
Frame = -2
Query: 158 SDDGKFLVTHTFGKWWYVDLQRRTCDCNEWQVTGIVCAHAVAVI 27
S + KF + G ++ VDL RTC C +W++TGI C HA+ VI
Sbjct: 670 SGENKFEILEGSG-YYSVDLLTRTCGCRQWELTGIPCPHAIYVI 712
Score = 35.4 bits (80), Expect(3) = 8e-16
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = -2
Query: 671 GLRIISNRQKGLNNALVSVFPHCNQRFCFRHM 576
G +IS++QKGL NA+ + P R C RH+
Sbjct: 498 GFTVISDKQKGLINAVADLLPQAEHRHCARHV 529
>ref|XP_002466925.1| hypothetical protein SORBIDRAFT_01g016800 [Sorghum bicolor]
gi|241920779|gb|EER93923.1| hypothetical protein
SORBIDRAFT_01g016800 [Sorghum bicolor]
Length = 995
Score = 48.9 bits (115), Expect(3) = 4e-15
Identities = 16/33 (48%), Positives = 24/33 (72%)
Frame = -2
Query: 107 VDLQRRTCDCNEWQVTGIVCAHAVAVIKPRRLP 9
VD+ RTCDC WQ+TG+ C HA++ ++ R+P
Sbjct: 717 VDINARTCDCRRWQLTGVPCCHAISCLRSERIP 749
Score = 45.8 bits (107), Expect(3) = 4e-15
Identities = 36/131 (27%), Positives = 55/131 (41%), Gaps = 3/131 (2%)
Frame = -1
Query: 579 HGKKNMKTRFRG--LDLEAWNXXXXXXXXXXXKLMDVI*KREAGAKDYLMNEDPRLWVRS 406
H N +F+G L + W + M+ + A ++ P W+R+
Sbjct: 558 HLYANFNEKFKGEILKKQLWACARSSSVQQWTRNMEKMKDLNVDAYQWIEKMPPNTWLRA 617
Query: 405 HFDHIVKSDHLSNNFTEVGNSRILEARDKPIGKMISVIMILQMKLLFDRKERSITWID-P 229
+F K D L NN EV NS ILEARD PI M+ I M + +++ I
Sbjct: 618 YFSEFPKCDILLNNNCEVFNSYILEARDLPILSMLERIKCPLMTRHYSKQQEIGKHIQGA 677
Query: 228 FVPRVMDIIRK 196
F P++ + K
Sbjct: 678 FCPKIRKKVAK 688
Score = 32.7 bits (73), Expect(3) = 4e-15
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = -2
Query: 662 IISNRQKGLNNALVSVFPHCNQRFCFRHM 576
I++++QKGL + VFP RFC RH+
Sbjct: 531 IMTDKQKGLIPTVKQVFPESEHRFCVRHL 559
>gb|ABA97240.1| transposon protein, putative, Mutator sub-class [Oryza sativa
Japonica Group]
Length = 1078
Score = 55.5 bits (132), Expect(3) = 2e-14
Identities = 39/131 (29%), Positives = 58/131 (44%), Gaps = 3/131 (2%)
Frame = -1
Query: 579 HGKKNMKTRFRGLDL--EAWNXXXXXXXXXXXKLMDVI*KREAGAKDYLMNEDPRLWVRS 406
H N + F+G +L + W M+ + A D+L +P WVR+
Sbjct: 673 HLYSNFQVHFKGENLKNQLWACARSSSVIEWVANMEEMATLNQDAHDWLKKMEPSTWVRA 732
Query: 405 HFDHIVKSDHLSNNFTEVGNSRILEARDKPIGKMISVIMILQMKLLFDR-KERSITWIDP 229
+F K D L NN EV N ILEAR+ P+ M+ I M F++ KE + W P
Sbjct: 733 YFSDFPKCDILLNNSCEVFNKYILEARELPMLSMLEKIKQQLMTRHFNKQKEAAEQWKGP 792
Query: 228 FVPRVMDIIRK 196
P++ + K
Sbjct: 793 ICPKIRKKVLK 803
Score = 40.8 bits (94), Expect(3) = 2e-14
Identities = 13/34 (38%), Positives = 24/34 (70%)
Frame = -2
Query: 113 WYVDLQRRTCDCNEWQVTGIVCAHAVAVIKPRRL 12
+ VD+ + CDC W +TGI C+HA++ ++ +R+
Sbjct: 830 YIVDINAKHCDCRRWDLTGIPCSHAISSLRYQRI 863
Score = 28.5 bits (62), Expect(3) = 2e-14
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = -2
Query: 662 IISNRQKGLNNALVSVFPHCNQRFCFRHM 576
I+ ++QKGL A+ +F RFC RH+
Sbjct: 646 IMIDKQKGLIPAVQQIFLDSEHRFCVRHL 674
>emb|CAH67772.1| H0322F07.9 [Oryza sativa Indica Group] gi|90399190|emb|CAH68177.1|
H0403D02.5 [Oryza sativa Indica Group]
Length = 1030
Score = 49.7 bits (117), Expect(3) = 9e-14
Identities = 40/131 (30%), Positives = 58/131 (44%), Gaps = 2/131 (1%)
Frame = -1
Query: 579 HGKKNMKTRFRG--LDLEAWNXXXXXXXXXXXKLMDVI*KREAGAKDYLMNEDPRLWVRS 406
H N + +F+G L + W K MDV+ A +++ P WVR+
Sbjct: 603 HLYSNFQLQFKGEVLKNQLWACARSSSVQEWNKNMDVMRNLNKSAYEWIEKLPPNTWVRA 662
Query: 405 HFDHIVKSDHLSNNFTEVGNSRILEARDKPIGKMISVIMILQMKLLFDRKERSITWIDPF 226
F K D L NN EV N ILEAR+ PI M+ I M F++++ +D F
Sbjct: 663 FFSEFPKCDILLNNNCEVFNKYILEARELPILTMLEKIKGQLMTRHFNKQKE---LVDQF 719
Query: 225 VPRVMDIIRKR 193
+ IRK+
Sbjct: 720 QGLICPKIRKK 730
Score = 38.9 bits (89), Expect(3) = 9e-14
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = -2
Query: 113 WYVDLQRRTCDCNEWQVTGIVCAHAVAVIKPRRL 12
+ VD+ CDC W +TGI C HA++ ++ R+
Sbjct: 760 YIVDINAMHCDCRRWDLTGIPCNHAISCLRHERI 793
Score = 34.3 bits (77), Expect(3) = 9e-14
Identities = 14/29 (48%), Positives = 20/29 (68%)
Frame = -2
Query: 662 IISNRQKGLNNALVSVFPHCNQRFCFRHM 576
I++++QKGL A+ VFP RFC RH+
Sbjct: 576 IMTDKQKGLIPAVQQVFPESEHRFCVRHL 604