BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00014797
         (1092 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266832.1| PREDICTED: AP-3 complex subunit sigma [Vitis...   261   2e-67
ref|XP_002521592.1| AP-3 complex subunit sigma-1, putative [Rici...   259   8e-67
emb|CAN81505.1| hypothetical protein VITISV_005564 [Vitis vinifera]   254   3e-65
gb|AFK43698.1| unknown [Medicago truncatula]                          253   6e-65
ref|NP_190655.2| AP-3 complex subunit sigma [Arabidopsis thalian...   251   2e-64

>ref|XP_002266832.1| PREDICTED: AP-3 complex subunit sigma [Vitis vinifera]
           gi|297735157|emb|CBI17519.3| unnamed protein product
           [Vitis vinifera]
          Length = 165

 Score =  261 bits (667), Expect = 2e-67
 Identities = 127/147 (86%), Positives = 140/147 (95%)
 Frame = +3

Query: 468 MIRAVMVINTQGKPRLAKFYEFMPVEKQQELIRSVFGVLCSRAENVSNFVEADSIFGPDT 647
           MIRAV+V+NTQGKPRL KFY++MP EKQQELIR VFGVLCSRAENVSNFVEADS+FGPDT
Sbjct: 1   MIRAVIVMNTQGKPRLTKFYDYMPPEKQQELIRRVFGVLCSRAENVSNFVEADSVFGPDT 60

Query: 648 RLVYKHYATLYFVFVFDDSENELAMLDLIQVFVETLDKCFRNVCELDIIFNFSKMHMVLN 827
           RLVYKHYATLYFVFVFD SENELAMLDLIQV VETLDKCF+NVCELDI+FN+SK+H +L+
Sbjct: 61  RLVYKHYATLYFVFVFDSSENELAMLDLIQVLVETLDKCFKNVCELDIVFNYSKLHTILD 120

Query: 828 EIIFGSQVLETSSAEVMKAVEEITKLE 908
           EIIFG QVLETSSAEVMKAVEEI++LE
Sbjct: 121 EIIFGGQVLETSSAEVMKAVEEISRLE 147


>ref|XP_002521592.1| AP-3 complex subunit sigma-1, putative [Ricinus communis]
           gi|223539270|gb|EEF40863.1| AP-3 complex subunit
           sigma-1, putative [Ricinus communis]
          Length = 166

 Score =  259 bits (662), Expect = 8e-67
 Identities = 126/147 (85%), Positives = 141/147 (95%)
 Frame = +3

Query: 468 MIRAVMVINTQGKPRLAKFYEFMPVEKQQELIRSVFGVLCSRAENVSNFVEADSIFGPDT 647
           MI+AV+V+NTQGKPRLAKFY+F+ VEKQQELIRSVFGVLCSRAENVSNF+EADSIFGPD+
Sbjct: 1   MIKAVLVMNTQGKPRLAKFYDFLSVEKQQELIRSVFGVLCSRAENVSNFMEADSIFGPDS 60

Query: 648 RLVYKHYATLYFVFVFDDSENELAMLDLIQVFVETLDKCFRNVCELDIIFNFSKMHMVLN 827
           RLVYKHYATLYFVFV+D  ENELA+LDLIQVFVETLDKCFRNVCELDI+FN+SK+H +L+
Sbjct: 61  RLVYKHYATLYFVFVYDSCENELAVLDLIQVFVETLDKCFRNVCELDIVFNYSKLHTILD 120

Query: 828 EIIFGSQVLETSSAEVMKAVEEITKLE 908
           EIIFG QVLETSS EVMKAVEEI+KLE
Sbjct: 121 EIIFGGQVLETSSTEVMKAVEEISKLE 147


>emb|CAN81505.1| hypothetical protein VITISV_005564 [Vitis vinifera]
          Length = 151

 Score =  254 bits (648), Expect = 3e-65
 Identities = 125/149 (83%), Positives = 136/149 (91%)
 Frame = +3

Query: 468 MIRAVMVINTQGKPRLAKFYEFMPVEKQQELIRSVFGVLCSRAENVSNFVEADSIFGPDT 647
           MIRAV+V+NTQGKPRL KFY++MP EKQQELIR VFGVLCSRAENVSNFVEADS+FGPDT
Sbjct: 1   MIRAVIVMNTQGKPRLTKFYDYMPPEKQQELIRRVFGVLCSRAENVSNFVEADSVFGPDT 60

Query: 648 RLVYKHYATLYFVFVFDDSENELAMLDLIQVFVETLDKCFRNVCELDIIFNFSKMHMVLN 827
           RLVYKHYATLYFVFVFD SENELAMLDLIQV VETLDKCF+NVCELDI+FN+SK+H +L+
Sbjct: 61  RLVYKHYATLYFVFVFDSSENELAMLDLIQVLVETLDKCFKNVCELDIVFNYSKLHTILD 120

Query: 828 EIIFGSQVLETSSAEVMKAVEEITKLEKT 914
           EIIFG QVLETSSAEVMKAV  I K   T
Sbjct: 121 EIIFGGQVLETSSAEVMKAVGNILKYYHT 149


>gb|AFK43698.1| unknown [Medicago truncatula]
          Length = 166

 Score =  253 bits (646), Expect = 6e-65
 Identities = 122/147 (82%), Positives = 137/147 (93%)
 Frame = +3

Query: 468 MIRAVMVINTQGKPRLAKFYEFMPVEKQQELIRSVFGVLCSRAENVSNFVEADSIFGPDT 647
           MI AV+V+NTQGKPRLAKFYEF PVEKQQE+IR+VF VLCSR E+VSNFV+A+S FGPD 
Sbjct: 1   MISAVLVMNTQGKPRLAKFYEFRPVEKQQEIIRNVFAVLCSRPEHVSNFVDAESFFGPDA 60

Query: 648 RLVYKHYATLYFVFVFDDSENELAMLDLIQVFVETLDKCFRNVCELDIIFNFSKMHMVLN 827
           RLVYKH+ATLYFVF+FD SENE AMLDLIQVFVETLDKCFRNVCELD++FN+SKMH +L+
Sbjct: 61  RLVYKHFATLYFVFIFDGSENEFAMLDLIQVFVETLDKCFRNVCELDVVFNYSKMHTILD 120

Query: 828 EIIFGSQVLETSSAEVMKAVEEITKLE 908
           EIIFG QVLETSSAEV+KAVEEITKLE
Sbjct: 121 EIIFGGQVLETSSAEVLKAVEEITKLE 147


>ref|NP_190655.2| AP-3 complex subunit sigma [Arabidopsis thaliana]
           gi|75161581|sp|Q8VZ37.1|AP3S_ARATH RecName: Full=AP-3
           complex subunit sigma; AltName: Full=AP-3 complex
           subunit sigma-3; AltName: Full=Adapter-related protein
           complex 3 sigma subunit; AltName: Full=Sigma-adaptin 3;
           AltName: Full=Sigma3-adaptin gi|17529106|gb|AAL38763.1|
           putative clathrin coat assembly protein [Arabidopsis
           thaliana] gi|20465749|gb|AAM20343.1| putative clathrin
           coat assembly protein [Arabidopsis thaliana]
           gi|332645198|gb|AEE78719.1| AP-3 complex subunit sigma
           [Arabidopsis thaliana]
          Length = 166

 Score =  251 bits (641), Expect = 2e-64
 Identities = 122/147 (82%), Positives = 137/147 (93%)
 Frame = +3

Query: 468 MIRAVMVINTQGKPRLAKFYEFMPVEKQQELIRSVFGVLCSRAENVSNFVEADSIFGPDT 647
           MI+AVM++NTQGKPRLAKFY+++PVEKQQELIR VF VLCSR ENVSNF+E +S+FGPD+
Sbjct: 1   MIKAVMMMNTQGKPRLAKFYDYLPVEKQQELIRGVFSVLCSRPENVSNFLEIESLFGPDS 60

Query: 648 RLVYKHYATLYFVFVFDDSENELAMLDLIQVFVETLDKCFRNVCELDIIFNFSKMHMVLN 827
           RLVYKHYATLYFV VFD SENELAMLDLIQV VETLDKCF NVCELDI+FN+SKMH VL+
Sbjct: 61  RLVYKHYATLYFVLVFDGSENELAMLDLIQVLVETLDKCFSNVCELDIVFNYSKMHAVLD 120

Query: 828 EIIFGSQVLETSSAEVMKAVEEITKLE 908
           EI+FG QVLETSSAEVMKAVEEI+KLE
Sbjct: 121 EIVFGGQVLETSSAEVMKAVEEISKLE 147