BLASTX nr result
ID: Coptis25_contig00014789
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00014789
(1829 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002316602.1| predicted protein [Populus trichocarpa] gi|2... 181 6e-43
emb|CAN74740.1| hypothetical protein VITISV_040899 [Vitis vinifera] 179 3e-42
emb|CBI32919.3| unnamed protein product [Vitis vinifera] 165 4e-38
ref|XP_003607639.1| F-box/LRR-repeat protein [Medicago truncatul... 164 7e-38
ref|XP_003610665.1| F-box/LRR-repeat protein [Medicago truncatul... 156 2e-35
>ref|XP_002316602.1| predicted protein [Populus trichocarpa] gi|222859667|gb|EEE97214.1|
predicted protein [Populus trichocarpa]
Length = 460
Score = 181 bits (459), Expect = 6e-43
Identities = 142/453 (31%), Positives = 221/453 (48%), Gaps = 11/453 (2%)
Frame = -3
Query: 1722 KDLEMGRQKIGEGGDRISFLPEGIIHCILSFLPTKYAVGTSVLSTRWRYLWTFVTNIDLC 1543
K+ + G + IG LP+ ++ ILSFL T+ AV TS+LS +W +LW TN+
Sbjct: 19 KETDSGEKSIGN-------LPDALLEHILSFLSTEAAVRTSILSKKWLHLWKSTTNLTF- 70
Query: 1542 DQLLFSDSMNEELVHKTIFMNFVERVLLLNDAPFIHKFCLSSKTVLDKSRINAWISNVLK 1363
+ + +FM+FV+RVL L I +F LS + D SR+ WIS +
Sbjct: 71 --------FGLKSPKRKLFMDFVDRVLALRGPSNIVQFYLSCEVKDDPSRVGTWISAAVN 122
Query: 1362 RKVQVLILNLCVGLEPLVFPHTLFNWESLTIIKLCADSVLKVPASISFSRLKVLHLDDIE 1183
R V+ L L L V PH LFN E+LT +++ +LK+P+SIS S LK+L+L ++
Sbjct: 123 RNVKDLYLELRDFEASFVLPHCLFNCETLTELEINMPYILKLPSSISLSCLKILNLYEV- 181
Query: 1182 VFCDQAIQHVSLSCPILEEVVFLNCRWLKMKVINISAPVLKRLVIVDILERKD-SFHDCE 1006
+F D S P L E+ C W+ + ++ISAP L+ L I + + S C
Sbjct: 182 IFTDDHSTQQLFSLPNLVELEIHECNWMNLVAVSISAPKLQSLDIHEPCQSSPASLGGCH 241
Query: 1005 IKVYAESLVSLELDCNMAYELSLYNLFSLFNASIDICST----RKIGQRVDKLLKAICDV 838
++++ L + ++ + LY S+ I I S R+ R KLL+ I
Sbjct: 242 VRIFGTHLADFTIIGTLSNDYCLYE-SSVVETCISIFSAADKPRQTAYRASKLLEGISSA 300
Query: 837 KDLRLSDDSIETLSKA-GLTENLLKFSNLKYVRLSVGVDWFNGEYLTELLHYLPNMECLF 661
+ L L+ + ++ L A L L+F NL + + + +++ P++ L
Sbjct: 301 QSLCLTTNVVDVLDDAPELLAFPLEFRNLTSLLFESEESNLHSDGFWHIIYNSPHLIALQ 360
Query: 660 IDYGLGVCEFEEDGMTD---QATPRDFLSNLKSVEVWEFSGSRNELCFLEFLLKNARALE 490
YG+ + + + D +P FLS LK ++V F G EL + FLLKNA ALE
Sbjct: 361 F-YGVSMPKVPSNCREDWTLDPSPPCFLSCLKFIQVGRFGGDEKELDAVGFLLKNATALE 419
Query: 489 TMTIISSSELLSDP--DKQLEVTKQLQMVPKGS 397
+M II S D DK E+ +QL +P+ S
Sbjct: 420 SMDIIYSGSARRDQGVDKTNEIHQQLLALPRWS 452
>emb|CAN74740.1| hypothetical protein VITISV_040899 [Vitis vinifera]
Length = 607
Score = 179 bits (453), Expect = 3e-42
Identities = 143/449 (31%), Positives = 222/449 (49%), Gaps = 18/449 (4%)
Frame = -3
Query: 1689 EGGDRISFLPEGIIHCILSFLPTKYAVGTSVLSTRWRYLWTFVTNIDLCDQLLFSDSMNE 1510
E D IS LP+ ++ ILSFLPTK+AVGTS+LS RWRYLW V +D D+L + S
Sbjct: 7 ESRDIISNLPDELLCHILSFLPTKFAVGTSILSKRWRYLWASVPILDFDDELWLNPSTLV 66
Query: 1509 ELVHKTI-FMNFVERVLLLNDAPFIHKFCLSSKTVLDKSRINAWISNVLKRKVQVLILNL 1333
EL + I F NFV+ VL ++ I KF L + + + +WI L+R+VQ L L+L
Sbjct: 67 ELEERIIMFQNFVDGVLRHSEVSCIKKFRLGYRD-NNLDSVYSWICIALERRVQELDLHL 125
Query: 1332 CVGLEPLVFPHTLFNWESLTIIKLCADSVLKVPASISFSRLKVLHLDDIEVFCDQAIQHV 1153
+ + P F ++L ++KL L +P ++ LK LHL +E D +IQ +
Sbjct: 126 LIDWR-VELPPMFFICKTLVVVKLSCALFLDIPTTVWLPSLKALHLKSVEYSDDDSIQKL 184
Query: 1152 SLSCPILEEVVFLNCRWLKMKVINISAPVLKRLVIVDILE-----RKDSFHDCEIKVYAE 988
CP+LEE+V V+N+S P LK L I + + D ++ V A
Sbjct: 185 LSGCPVLEELVIEREERDNQWVVNVSNPSLKILRIFFFTDGFAHPYEQEDQDYKVVVDAP 244
Query: 987 SLVSLELDCNMAYELSLYNLFSLFNASIDICSTRKIGQR------------VDKLLKAIC 844
+L L + ++ + + +L SL A ID+ + + + +LL I
Sbjct: 245 NLEYLSITDYLSKDYFVKDLPSLVKAFIDVEQDSEEFEESPHNGGISYHGPIYELLGRIS 304
Query: 843 DVKDLRLSDDSIETLSKAGLTENLLKFSNLKYVRLSVGVDWFNGEYLTELLHYLPNMECL 664
+VK L L+ ++++LS L F N+ + + + FN ++L LH PN+E L
Sbjct: 305 NVKCLSLTGVTLDSLSGTIGDYKLPTFHNMTRLEF-LFIGGFNWDFLPNFLHSSPNLEAL 363
Query: 663 FIDYGLGVCEFEEDGMTDQATPRDFLSNLKSVEVWEFSGSRNELCFLEFLLKNARALETM 484
I+ G E + P + +LK +E+ G EL +E+LLKNA L+ M
Sbjct: 364 VIETGYTNELIPEGWLMPLQVPACLVLHLKEIEIRRIVGEDYELEAVEYLLKNAEVLQQM 423
Query: 483 TIISSSELLSDPDKQLEVTKQLQMVPKGS 397
TI + D++ V K+L +P+GS
Sbjct: 424 TIDCHESYM---DQEFCVCKKLLGLPRGS 449
>emb|CBI32919.3| unnamed protein product [Vitis vinifera]
Length = 411
Score = 165 bits (417), Expect = 4e-38
Identities = 140/415 (33%), Positives = 197/415 (47%), Gaps = 10/415 (2%)
Frame = -3
Query: 1692 GEGGDRISFLPEGIIHCILSFLPTKYAVGTSVLSTRWRYLWTFVTNIDLCDQLLFS-DSM 1516
G+ DRIS LP+ ++ I+SFLPTK+AVGTSVLS RWRYLW + N+D D LL D
Sbjct: 6 GKSRDRISNLPDAVLCHIISFLPTKFAVGTSVLSKRWRYLWASIPNLDFDDDLLLDRDKP 65
Query: 1515 NEELVHKTIFMNFVERVLLLNDAPFIHKFCLSSKTVLDKSRINAWISNVLKRKVQVLILN 1336
+ F NFV++VLL I KF L S +N+WI L+R VQ L L
Sbjct: 66 IGDSERSICFKNFVDKVLLHGSISCIRKFRLKCSDHELDSAVNSWICTALERNVQELDLY 125
Query: 1335 LCVGLEPLVFPHTLFNWESLTIIKLCADSVLKVPASISFSRLKVLHLDDIEVFCDQAIQH 1156
P+ P F ++L ++KL
Sbjct: 126 FDTEY-PIELPPKFFFCKTLVVLKL----------------------------------- 149
Query: 1155 VSLSCPILEEVVFLNCRWLKMKVINISAPVLKRLVIVDILERKDSFHDCEIKVYAESLVS 976
CP+LEE+V R + V N+SAP LK L I F ++ V A +L
Sbjct: 150 ----CPVLEELVIERWRLDEQWVFNVSAPTLKSLAIY--------FSKYKLVVDAPNLEY 197
Query: 975 LELDCNMAYELSLYNLFSLFNASIDICST-RKIGQ------RVDKLLKAICDVKDLRLSD 817
L + ++ + + NL SL A +++ T R I R+ +LL+ I +VK L LS
Sbjct: 198 LSITDFVSEDYLMSNLSSLVKAYVNVGPTIRGIDDQILYRGRIYELLRGISNVKHLSLSG 257
Query: 816 DSIETLSKAGLTENLLKFSNLKYVRLSVGVDWFNG-EYLTELLHYLPNMECLFID-YGLG 643
+++ +LS L F ++ RL + VD+ G E+L E L PN+E L ++
Sbjct: 258 ETLHSLSGMFCGYELPAFHSV--TRLELEVDYGYGLEFLKEFLDTSPNLEILILENVNKD 315
Query: 642 VCEFEEDGMTDQATPRDFLSNLKSVEVWEFSGSRNELCFLEFLLKNARALETMTI 478
CE EE + Q P +L VE+ +F G EL +EFLLKNAR L+ M+I
Sbjct: 316 ECEIEEWTLPLQ-VPTCVELHLNEVEIKKFDGLDYELGAIEFLLKNARVLKKMSI 369
>ref|XP_003607639.1| F-box/LRR-repeat protein [Medicago truncatula]
gi|355508694|gb|AES89836.1| F-box/LRR-repeat protein
[Medicago truncatula]
Length = 467
Score = 164 bits (415), Expect = 7e-38
Identities = 138/449 (30%), Positives = 220/449 (48%), Gaps = 21/449 (4%)
Frame = -3
Query: 1680 DRISFLPEGIIHCILSFLPTKYAVGTSVLSTRWRYLWTFVTNIDLCDQLLFSDSMNEELV 1501
D IS LPEGI++ ILS L T+ AV TS+L+T+WRYLWT + D D +S + + +
Sbjct: 23 DMISDLPEGILYYILSRLSTEEAVRTSILATKWRYLWTQLPVFDFRDSSPKRNSKSPDCL 82
Query: 1500 HKTIFMNFVERVLLLNDAPFIHK-FCLSSKTVLDKSRINAWISNVLKRKVQVLILNLCVG 1324
++ V++ LL+ + I K F T++D ++++ +S+ L V L LNL
Sbjct: 83 -----VDLVDQ--LLHKSNRIKKLFIELPVTIVDAGKVSSMLSSALMHDVHDLTLNLESE 135
Query: 1323 LEPLVFPHTLFNWESLTIIKLCADSVLKVPASISFSRLKVLHLDDIEVFCDQAIQHVSLS 1144
V P++ SLT + + + VP I F LK+L + +++ Q +
Sbjct: 136 NSRFVLPNSFSASRSLTKLDIVFGFLDSVPDGICFPSLKILSFAHVTFTNEKSAQRLFSG 195
Query: 1143 CPILEEVVFLNCRWLKMKVINISAPVLKRLVIVDILERKDSF--HDCEIKVYAESLVSLE 970
CP+L+++ F C W+ + I+++ P LK+L DI R S + C K+ A +L+SL
Sbjct: 196 CPVLQDLSFEKCYWVNIN-ISVAIPTLKKL---DIFFRSSSLDRNSCMFKIDAVNLLSLS 251
Query: 969 LDCNMAYELSLYNLFSLFNASIDI---C---STRKIGQRVDKLLKAICDVKDLRLSDDSI 808
N L N S+ +A+ID+ C + + +L + V+ LRLSD +I
Sbjct: 252 YKSNPTINCFLVNSTSIVDANIDLGFFCVQNNELHVAVFAIELFSRLGSVESLRLSDQTI 311
Query: 807 ETLSKAGLTENLL-KFSNLKYVRLSVGVDWFNGEYLTELLHYLPNMECLFIDYGL----- 646
+ L+ A +LL F NL RL V D + E L ++L P +E L I YG+
Sbjct: 312 QCLNYAKSALHLLPSFKNL--TRLEVHFDDPSCEVLADILRKSPKLEFLHI-YGVHLVSC 368
Query: 645 ------GVCEFEEDGMTDQATPRDFLSNLKSVEVWEFSGSRNELCFLEFLLKNARALETM 484
+ + T + P F S+LKS ++ +F G E+ ++FLL+N L M
Sbjct: 369 SRFSSGSYLSLDSEDWTSDSLPCCFKSSLKSCDISDFRGDEAEIRLVKFLLENVTLLREM 428
Query: 483 TIISSSELLSDPDKQLEVTKQLQMVPKGS 397
I + L K +V QLQ + GS
Sbjct: 429 NIYCTGYLSKKSKKLADVRNQLQALGMGS 457
>ref|XP_003610665.1| F-box/LRR-repeat protein [Medicago truncatula]
gi|355512000|gb|AES93623.1| F-box/LRR-repeat protein
[Medicago truncatula]
Length = 489
Score = 156 bits (395), Expect = 2e-35
Identities = 143/494 (28%), Positives = 231/494 (46%), Gaps = 42/494 (8%)
Frame = -3
Query: 1731 WSLKDLEMGRQKIGEGGDRISFLPEGIIHCILSFLPTKYAVGTSVLSTRWRYLWTFVTNI 1552
W D E G+ E ++ LP+GI+ ILS LPTK AV TSVLS W + WT + I
Sbjct: 7 WQKLDGEDGKD---ENITKLCDLPDGIVQKILSDLPTKEAVATSVLSKSWVHKWTGINKI 63
Query: 1551 DLCDQLLFSDSMNEELVHKTIFMNFVERVLLLNDAPFIHKFCLSSKTVLDKSRINAWISN 1372
DL +LL D + E + F++FVE++ + + + KF L + ++ R+ W+S
Sbjct: 64 DL--ELL--DEVAPE--KRQQFIDFVEKLRVFCNTSSLKKFSLFFEVGMEAPRVTKWLSI 117
Query: 1371 VLKRKVQVLILNLCVGLEPLVFPHTLFNWESLTIIKLCADSVLKVPASISFSRLKVLHLD 1192
+ ++ L L L EPLV F E LT +L V+K+P++I+F L L L
Sbjct: 118 FVNPNIEELKLELYTVKEPLVLSDQFFTSEKLTKFELSMSQVIKLPSTINFQNLVTLTLK 177
Query: 1191 DIEVFCDQAIQHVSLSCPILEEVVFLNCRWLKMKVINISAPVLKRLVIVDILER--KDSF 1018
+ LS L+E+ ++C W K+ I I+ P+L++L I D + +D
Sbjct: 178 HVIFPNYYCTTEFFLSLRSLKEMTLIDCNWKKVGTIIITCPLLQKLFIRDWKDHDDEDDH 237
Query: 1017 HDCE------------------------------IKVYAESLVSLELDCNMAYELSLYNL 928
HD E I++ + LVS D ++ + SL+
Sbjct: 238 HDNEEEVEEELAEELNNDVNDITAVENLNYHHGLIRILSNELVSFTYDGDLMNDYSLFYT 297
Query: 927 FSLFNASIDICSTRK----IGQRVDKLLKAICDVKDLRLSDDSIETLSK-AGLTENLLKF 763
FS+ NA+I + G + KL A+ V L +SD +++ L + L +L F
Sbjct: 298 FSVSNATIKLHEQHNNMLHAGHFIYKLFIALSGVTKLSVSDFALQALCQPLLLAAHLPLF 357
Query: 762 SNLKYVRLS--VGVDWFNGEYLTELLHYLPNMECLFIDYGLGVCEFEEDGMTDQATPRDF 589
NL +R++ VD + E L LL P +E I++ G+ G P F
Sbjct: 358 FNLVKLRVTSPSAVD-LSCEGLHSLLRNSPFLE--KIEFKEGITLAANGGNLINPLPGCF 414
Query: 588 LSNLKSVEVWEFSGSRNELCFLEFLLKNARALETMTIISSSELLSDPD--KQLE-VTKQL 418
+ LK +++++F GS EL ++FLL+ L+T+ I + P+ K L+ + +Q+
Sbjct: 415 WTKLKVIKIYDFCGSDGELNAIKFLLQETLVLDTLYIQYNESHFDSPEGTKMLDMLLEQI 474
Query: 417 QMVPKGSMHSVIDI 376
PK SM I++
Sbjct: 475 YEFPKASMDCDIEV 488