BLASTX nr result

ID: Coptis25_contig00014762 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00014762
         (368 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI31426.3| unnamed protein product [Vitis vinifera]               74   9e-12
ref|XP_002270524.1| PREDICTED: U-box domain-containing protein 1...    74   9e-12
ref|XP_002529604.1| E3 ubiquitin ligase PUB14, putative [Ricinus...    68   9e-10
ref|XP_002311996.1| predicted protein [Populus trichocarpa] gi|2...    64   1e-08
sp|Q5VRH9.1|PUB12_ORYSJ RecName: Full=U-box domain-containing pr...    64   2e-08

>emb|CBI31426.3| unnamed protein product [Vitis vinifera]
          Length = 555

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 38/58 (65%), Positives = 45/58 (77%)
 Frame = -3

Query: 366 AVLWSLCIADGKHLKTSKECGVEEALKDLS*SGTDRAKRKAANLLELLHWTLEEVVSP 193
           AVLWSLC  D +HLK ++E G EEALK+LS +GTDRAKRKA N+LELL   +E VV P
Sbjct: 499 AVLWSLCTGDAQHLKIARELGAEEALKELSENGTDRAKRKAGNILELLQ-RVEVVVDP 555


>ref|XP_002270524.1| PREDICTED: U-box domain-containing protein 14 [Vitis vinifera]
          Length = 628

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 38/58 (65%), Positives = 45/58 (77%)
 Frame = -3

Query: 366 AVLWSLCIADGKHLKTSKECGVEEALKDLS*SGTDRAKRKAANLLELLHWTLEEVVSP 193
           AVLWSLC  D +HLK ++E G EEALK+LS +GTDRAKRKA N+LELL   +E VV P
Sbjct: 572 AVLWSLCTGDAQHLKIARELGAEEALKELSENGTDRAKRKAGNILELLQ-RVEVVVDP 628


>ref|XP_002529604.1| E3 ubiquitin ligase PUB14, putative [Ricinus communis]
           gi|223530937|gb|EEF32796.1| E3 ubiquitin ligase PUB14,
           putative [Ricinus communis]
          Length = 575

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 34/48 (70%), Positives = 39/48 (81%)
 Frame = -3

Query: 366 AVLWSLCIADGKHLKTSKECGVEEALKDLS*SGTDRAKRKAANLLELL 223
           AVLWSLC  D + LK +KE G EEALK+LS SGTDRAKRKA +LLEL+
Sbjct: 516 AVLWSLCAGDLQQLKLAKESGAEEALKELSESGTDRAKRKAGSLLELI 563


>ref|XP_002311996.1| predicted protein [Populus trichocarpa] gi|222851816|gb|EEE89363.1|
           predicted protein [Populus trichocarpa]
          Length = 628

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 31/48 (64%), Positives = 38/48 (79%)
 Frame = -3

Query: 366 AVLWSLCIADGKHLKTSKECGVEEALKDLS*SGTDRAKRKAANLLELL 223
           A+LWSLC  D + L  +K+ G EEALK+LS SGTDRAKRKA ++LELL
Sbjct: 571 AILWSLCTGDSQQLILAKQFGAEEALKELSESGTDRAKRKAGSILELL 618


>sp|Q5VRH9.1|PUB12_ORYSJ RecName: Full=U-box domain-containing protein 12; AltName:
           Full=Plant U-box protein 12; Short=OsPUB12
           gi|55296754|dbj|BAD67946.1| putative cell death-related
           protein SPL11 [Oryza sativa Japonica Group]
           gi|215695309|dbj|BAG90500.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 611

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 30/54 (55%), Positives = 41/54 (75%)
 Frame = -3

Query: 366 AVLWSLCIADGKHLKTSKECGVEEALKDLS*SGTDRAKRKAANLLELLHWTLEE 205
           A+LW LC AD +    +K  GVE+ALK+LS +GTDRAKRKA+++LEL+H   E+
Sbjct: 551 AILWLLCSADTEQTLAAKAAGVEDALKELSETGTDRAKRKASSILELMHQANED 604


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