BLASTX nr result

ID: Coptis25_contig00014757 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00014757
         (601 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tpg|DAA56016.1| TPA: hypothetical protein ZEAMMB73_705793 [Zea m...   168   6e-40
tpg|DAA56015.1| TPA: hypothetical protein ZEAMMB73_705793 [Zea m...   168   6e-40
gb|ADG43144.1| auxin response factor 10 [Zea mays]                    168   6e-40
gb|AAP06759.1| auxin response factor-like protein [Mangifera ind...   168   6e-40
ref|XP_002318767.1| predicted protein [Populus trichocarpa] gi|2...   167   1e-39

>tpg|DAA56016.1| TPA: hypothetical protein ZEAMMB73_705793 [Zea mays]
          Length = 805

 Score =  168 bits (426), Expect = 6e-40
 Identities = 88/198 (44%), Positives = 122/198 (61%), Gaps = 4/198 (2%)
 Frame = +1

Query: 1   RHCKNLHNNTASVLTTHSMQLGVLATAFHALTAGSMFTVYYRPRSSPTNFIVPCDLYTKS 180
           R  + L N  +SV+++ SM LGVLATA+HA+   SMFTVYY+PR+SP+ FI+P D Y +S
Sbjct: 228 RAMRQLSNVPSSVISSQSMHLGVLATAWHAINTKSMFTVYYKPRTSPSEFIIPYDQYMES 287

Query: 181 IKTSISVGMVFRLKSDDDECPEESLIGTIAGIEEVDPVRWPGSKWRCLKAQWSGPCAVVR 360
           +K + S+GM FR++ + +E PE+   GTI G E +DP+ WP S WR LK +W  P  + R
Sbjct: 288 VKNNYSIGMRFRMRFEGEEAPEQRFTGTIVGCENLDPL-WPDSSWRYLKVRWDEPSTIPR 346

Query: 361 PERISPWKIEALEVTNKSPISFPNLSKRPR----TPRYMSSALVNHGKMSLRDLIEPAPQ 528
           P+R+SPWKIE       +P+   + +KRPR     P   SS L   G   +   I+ A Q
Sbjct: 347 PDRVSPWKIEPASSPPVNPLVHSSRAKRPRQNVPPPSLESSVLTKEGATKVE--IDSA-Q 403

Query: 529 TQRHQEVLQDQEDVEIGN 582
           TQ    VLQ QE + + N
Sbjct: 404 TQHQNSVLQGQEQMTLRN 421


>tpg|DAA56015.1| TPA: hypothetical protein ZEAMMB73_705793 [Zea mays]
          Length = 822

 Score =  168 bits (426), Expect = 6e-40
 Identities = 88/198 (44%), Positives = 122/198 (61%), Gaps = 4/198 (2%)
 Frame = +1

Query: 1   RHCKNLHNNTASVLTTHSMQLGVLATAFHALTAGSMFTVYYRPRSSPTNFIVPCDLYTKS 180
           R  + L N  +SV+++ SM LGVLATA+HA+   SMFTVYY+PR+SP+ FI+P D Y +S
Sbjct: 228 RAMRQLSNVPSSVISSQSMHLGVLATAWHAINTKSMFTVYYKPRTSPSEFIIPYDQYMES 287

Query: 181 IKTSISVGMVFRLKSDDDECPEESLIGTIAGIEEVDPVRWPGSKWRCLKAQWSGPCAVVR 360
           +K + S+GM FR++ + +E PE+   GTI G E +DP+ WP S WR LK +W  P  + R
Sbjct: 288 VKNNYSIGMRFRMRFEGEEAPEQRFTGTIVGCENLDPL-WPDSSWRYLKVRWDEPSTIPR 346

Query: 361 PERISPWKIEALEVTNKSPISFPNLSKRPR----TPRYMSSALVNHGKMSLRDLIEPAPQ 528
           P+R+SPWKIE       +P+   + +KRPR     P   SS L   G   +   I+ A Q
Sbjct: 347 PDRVSPWKIEPASSPPVNPLVHSSRAKRPRQNVPPPSLESSVLTKEGATKVE--IDSA-Q 403

Query: 529 TQRHQEVLQDQEDVEIGN 582
           TQ    VLQ QE + + N
Sbjct: 404 TQHQNSVLQGQEQMTLRN 421


>gb|ADG43144.1| auxin response factor 10 [Zea mays]
          Length = 799

 Score =  168 bits (426), Expect = 6e-40
 Identities = 88/198 (44%), Positives = 122/198 (61%), Gaps = 4/198 (2%)
 Frame = +1

Query: 1   RHCKNLHNNTASVLTTHSMQLGVLATAFHALTAGSMFTVYYRPRSSPTNFIVPCDLYTKS 180
           R  + L N  +SV+++ SM LGVLATA+HA+   SMFTVYY+PR+SP+ FI+P D Y +S
Sbjct: 222 RAMRQLSNVPSSVISSQSMHLGVLATAWHAINTKSMFTVYYKPRTSPSEFIIPYDQYMES 281

Query: 181 IKTSISVGMVFRLKSDDDECPEESLIGTIAGIEEVDPVRWPGSKWRCLKAQWSGPCAVVR 360
           +K + S+GM FR++ + +E PE+   GTI G E +DP+ WP S WR LK +W  P  + R
Sbjct: 282 VKNNYSIGMRFRMRFEGEEAPEQRFTGTIVGCENLDPL-WPDSSWRYLKVRWDEPSTIPR 340

Query: 361 PERISPWKIEALEVTNKSPISFPNLSKRPR----TPRYMSSALVNHGKMSLRDLIEPAPQ 528
           P+R+SPWKIE       +P+   + +KRPR     P   SS L   G   +   I+ A Q
Sbjct: 341 PDRVSPWKIEPASSPPVNPLVHSSRAKRPRQNVPPPSLESSVLTKEGATKVE--IDSA-Q 397

Query: 529 TQRHQEVLQDQEDVEIGN 582
           TQ    VLQ QE + + N
Sbjct: 398 TQHQNSVLQGQEQMTLRN 415


>gb|AAP06759.1| auxin response factor-like protein [Mangifera indica]
          Length = 840

 Score =  168 bits (426), Expect = 6e-40
 Identities = 91/188 (48%), Positives = 119/188 (63%), Gaps = 7/188 (3%)
 Frame = +1

Query: 22  NNTASVLTTHSMQLGVLATAFHALTAGSMFTVYYRPRSSPTNFIVPCDLYTKSIKTSISV 201
           N  +SV+++HSM LGVLATA+HA++ G+MFTVYY+PR SP  FIVP D Y +S+K++ S+
Sbjct: 246 NVPSSVISSHSMHLGVLATAWHAVSTGTMFTVYYKPRISPAEFIVPFDQYMESVKSNYSI 305

Query: 202 GMVFRLKSDDDECPEESLIGTIAGIEEVDPVRWPGSKWRCLKAQWSGPCAVVRPERISPW 381
           GM F ++ + +E PE+   GTI GIE+ DP RWP SKWRCLK +W     V RPER+SPW
Sbjct: 306 GMGFEMRFEGEEAPEQRYTGTIVGIEDADPQRWPDSKWRCLKVRWDETSTVPRPERVSPW 365

Query: 382 KIE---ALEVTNKSPISFPNLSKRPRTPRYM----SSALVNHGKMSLRDLIEPAPQTQRH 540
           KIE   A    N  P+S P   KRPR+        SS L   G   +   ++P+  T   
Sbjct: 366 KIEPALAPLALNPLPLSRP---KRPRSNMVPSSPDSSVLTREGSFKVN--VDPSSAT-GF 419

Query: 541 QEVLQDQE 564
             VLQ QE
Sbjct: 420 SRVLQGQE 427


>ref|XP_002318767.1| predicted protein [Populus trichocarpa] gi|222859440|gb|EEE96987.1|
           predicted protein [Populus trichocarpa]
          Length = 854

 Score =  167 bits (424), Expect = 1e-39
 Identities = 93/209 (44%), Positives = 128/209 (61%), Gaps = 9/209 (4%)
 Frame = +1

Query: 1   RHCKNLHNNTASVLTTHSMQLGVLATAFHALTAGSMFTVYYRPRSSPTNFIVPCDLYTKS 180
           R  +   N  +SV+++HSM LGVLATA+HA++ G+MFTVYY+PR+SP  FIVP D Y +S
Sbjct: 256 RAMRQQSNVPSSVISSHSMHLGVLATAWHAVSTGTMFTVYYKPRTSPAEFIVPFDQYMES 315

Query: 181 IKTSISVGMVFRLKSDDDECPEESLIGTIAGIEEVDPVRWPGSKWRCLKAQWSGPCAVVR 360
           +K++ S+GM F+++ + +E PE+   GTI GIE+ DP RW  SKWRCLK +W     + R
Sbjct: 316 VKSNYSIGMRFKMRFEGEEAPEQRFTGTIVGIEDADPSRWKDSKWRCLKVRWDETSTIPR 375

Query: 361 PERISPWKIE-ALEVTNKSPISFPNLSKRPRTPRYM-------SSALVNHGKMSLRDLIE 516
           P+R+SPWKIE AL     +P+  P    RP+ PR         SS L   G  S +   +
Sbjct: 376 PDRVSPWKIEPALAPPALNPLPMP----RPKRPRANMVPSSPDSSVLTREG--SSKVTAD 429

Query: 517 PAPQTQRHQEVLQDQEDVEI-GNPESGNE 600
           P+        VL+ QE   + GN E GNE
Sbjct: 430 PS-SASGFSRVLRGQEFSTLRGNFEEGNE 457


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