BLASTX nr result

ID: Coptis25_contig00014745 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00014745
         (580 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN83217.1| hypothetical protein VITISV_018000 [Vitis vinife...   116   2e-24
ref|XP_002533037.1| conserved hypothetical protein [Ricinus comm...    91   1e-16
emb|CBI41083.3| unnamed protein product [Vitis vinifera]               91   2e-16
ref|XP_002322512.1| predicted protein [Populus trichocarpa] gi|2...    90   2e-16
ref|XP_002308804.1| predicted protein [Populus trichocarpa] gi|2...    86   3e-15

>emb|CAN83217.1| hypothetical protein VITISV_018000 [Vitis vinifera]
           gi|297737545|emb|CBI26746.3| unnamed protein product
           [Vitis vinifera]
          Length = 124

 Score =  116 bits (291), Expect = 2e-24
 Identities = 66/125 (52%), Positives = 87/125 (69%)
 Frame = -1

Query: 541 QQDGDLIVSHSSIALLQERFKQLERMKEMREQKEVLRLFPVSERTTSPTMHYEPSRRYCN 362
           +Q  D IV HSSIALLQERF+QL+R KEMRE++E+LRLF  S    +PT   EPSR +  
Sbjct: 3   RQSSDPIVIHSSIALLQERFRQLQRAKEMREERELLRLFSQSP-GVNPTEFPEPSRSFFQ 61

Query: 361 PELSLSPRPSPQGSLSSRPESHHNKQTDYRDVDTPLLMNLWPKNRALHRTSFTCDNNEVD 182
            EL L  R    GS SS+P S HNK +D + ++TP+L+NLWP  + ++R S   D+++VD
Sbjct: 62  SELILPHRSPLPGSPSSQPNS-HNKHSDLQVIETPILVNLWPSEK-VYRASKNFDDSDVD 119

Query: 181 TSLHL 167
           TSLHL
Sbjct: 120 TSLHL 124


>ref|XP_002533037.1| conserved hypothetical protein [Ricinus communis]
           gi|223527175|gb|EEF29345.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 124

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 56/125 (44%), Positives = 79/125 (63%)
 Frame = -1

Query: 541 QQDGDLIVSHSSIALLQERFKQLERMKEMREQKEVLRLFPVSERTTSPTMHYEPSRRYCN 362
           +Q+ D    HSSIALLQERF+QLER KEMR+Q+E+LRLF  +E+   P   +E SR + +
Sbjct: 3   RQNCDPTSIHSSIALLQERFRQLERAKEMRQQRELLRLFSEAEQ-VKPPKAFEQSRPFFH 61

Query: 361 PELSLSPRPSPQGSLSSRPESHHNKQTDYRDVDTPLLMNLWPKNRALHRTSFTCDNNEVD 182
            EL L      Q SL  +P +  N+  + +  +TP  ++LW KN  +H T+   D ++VD
Sbjct: 62  SELVLPLGQPLQDSLYLQP-NMQNRHAELQINETPNSVDLWSKNTVMHITN-NFDESDVD 119

Query: 181 TSLHL 167
           TSLHL
Sbjct: 120 TSLHL 124


>emb|CBI41083.3| unnamed protein product [Vitis vinifera]
          Length = 629

 Score = 90.5 bits (223), Expect = 2e-16
 Identities = 54/130 (41%), Positives = 78/130 (60%), Gaps = 5/130 (3%)
 Frame = -1

Query: 541 QQDGDLIVSHSSIALLQERFKQLERMKEMREQKEVLRLFPVSERTTSPTMHYEPSRRYCN 362
           ++  D I  HSSIALLQERF+QL+R+KEMRE++E+L      +   SP +HY+ SR   +
Sbjct: 3   REGNDPIAIHSSIALLQERFRQLQRVKEMREERELLMKNTGDQGRFSPAIHYQSSRLSSH 62

Query: 361 PELSLSPRPSPQGSLSSRPESHHNKQTDYRDVDTPLLMNLWPKNRALHRTSF-----TCD 197
           PEL     P P+ +LS RP S   K +++   + PLL NL  ++    R S      +  
Sbjct: 63  PELIFPTPPPPEVTLSLRP-SLQIKHSNFHGDENPLLKNLQRRDELFMRASMNKFHESDS 121

Query: 196 NNEVDTSLHL 167
           +++VDTSLHL
Sbjct: 122 DSDVDTSLHL 131


>ref|XP_002322512.1| predicted protein [Populus trichocarpa] gi|222867142|gb|EEF04273.1|
           predicted protein [Populus trichocarpa]
          Length = 136

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 57/133 (42%), Positives = 80/133 (60%), Gaps = 9/133 (6%)
 Frame = -1

Query: 538 QDGDLIVSHSSIALLQERFKQLERMKEMREQKEVLRLFPVSERTTSPTMHYEP--SRRYC 365
           ++ D +V  SSIALLQERF+QL+R+K MRE+KE+ ++   S R  SP+M YEP  SR + 
Sbjct: 4   ENNDPVVIQSSIALLQERFRQLQRVKAMREEKELSKVLVESPRQLSPSMQYEPAASRLFF 63

Query: 364 NPELSLSPRP-SPQGSLSSRPESHHNKQTDYRDVDTPLLMNLWP-KNRALHR-----TSF 206
           +PEL L PR   P   LS RP     +   + ++DTP LM+  P K  + H         
Sbjct: 64  HPELILQPRSVPPHICLSLRPNPQSKQAGFWCELDTPALMSSSPTKTLSSHGLLDKFDDS 123

Query: 205 TCDNNEVDTSLHL 167
             D++++DTSLHL
Sbjct: 124 ATDDDDIDTSLHL 136


>ref|XP_002308804.1| predicted protein [Populus trichocarpa] gi|222854780|gb|EEE92327.1|
           predicted protein [Populus trichocarpa]
          Length = 137

 Score = 86.3 bits (212), Expect = 3e-15
 Identities = 61/136 (44%), Positives = 85/136 (62%), Gaps = 11/136 (8%)
 Frame = -1

Query: 541 QQDGDLIVSHSSIALLQERFKQLERMKEMREQKEVLRLFPV-SERTTSPTMHY-EP---S 377
           +++ D IV  SSIALLQERF+QL+R+K MRE+KE+ R   V S + +SPTM Y EP   +
Sbjct: 3   KENTDPIVIQSSIALLQERFRQLQRVKAMREEKELSRNIHVESTKQSSPTMQYHEPAAAN 62

Query: 376 RRYCNPELSLSPRPSPQGSLSSRPESHHNKQTDYRDVDTPLLMNLW-----PKNRALHR- 215
           R + +PEL L PR  P   LS  P +  +KQ  +R  +TP LM+L      PK   L + 
Sbjct: 63  RLFFHPELILQPRSPPHVCLSLWP-NPQSKQAGFRCEETPALMSLSSTKTPPKLGVLDKF 121

Query: 214 TSFTCDNNEVDTSLHL 167
            +   D++++DTSLHL
Sbjct: 122 DASATDDDDIDTSLHL 137


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