BLASTX nr result

ID: Coptis25_contig00014716 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00014716
         (285 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004134132.1| PREDICTED: parafibromin-like [Cucumis sativu...   185   3e-45
ref|XP_002517109.1| conserved hypothetical protein [Ricinus comm...   182   3e-44
emb|CBI26279.3| unnamed protein product [Vitis vinifera]              179   3e-43
ref|XP_002282888.1| PREDICTED: parafibromin-like [Vitis vinifera]     179   3e-43
ref|XP_003537641.1| PREDICTED: parafibromin-like [Glycine max]        178   3e-43

>ref|XP_004134132.1| PREDICTED: parafibromin-like [Cucumis sativus]
           gi|449513423|ref|XP_004164322.1| PREDICTED:
           parafibromin-like [Cucumis sativus]
          Length = 407

 Score =  185 bits (470), Expect = 3e-45
 Identities = 87/94 (92%), Positives = 90/94 (95%)
 Frame = +3

Query: 3   EDGVFIPTDVKVKQMKGARPDCITVQKKFSRDGVVTVTAYEVRDKPSALKAEDWDRVVAV 182
           EDGVFIPTDVKVKQMKGARPDC+TVQKKFSRD    VTAYEVRDKPSALK+EDWDRVVAV
Sbjct: 267 EDGVFIPTDVKVKQMKGARPDCVTVQKKFSRDRDRVVTAYEVRDKPSALKSEDWDRVVAV 326

Query: 183 FVLGKEWQFKDWPFKDHVEIFNKIIGFFMRFEDD 284
           FVLGKEWQFKDWPFKDHVEIFNKIIGF+MRFEDD
Sbjct: 327 FVLGKEWQFKDWPFKDHVEIFNKIIGFYMRFEDD 360


>ref|XP_002517109.1| conserved hypothetical protein [Ricinus communis]
           gi|223543744|gb|EEF45272.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 409

 Score =  182 bits (461), Expect = 3e-44
 Identities = 85/94 (90%), Positives = 89/94 (94%)
 Frame = +3

Query: 3   EDGVFIPTDVKVKQMKGARPDCITVQKKFSRDGVVTVTAYEVRDKPSALKAEDWDRVVAV 182
           EDGV+IPTDVKVKQMKGA+PDC+TVQKKFS D    +TAYEVRDKPSALKAEDWDRVVAV
Sbjct: 269 EDGVYIPTDVKVKQMKGAKPDCVTVQKKFSTDRNRVMTAYEVRDKPSALKAEDWDRVVAV 328

Query: 183 FVLGKEWQFKDWPFKDHVEIFNKIIGFFMRFEDD 284
           FVLGKEWQFKDWPFKDHVEIFNKIIGFFMRFEDD
Sbjct: 329 FVLGKEWQFKDWPFKDHVEIFNKIIGFFMRFEDD 362


>emb|CBI26279.3| unnamed protein product [Vitis vinifera]
          Length = 312

 Score =  179 bits (453), Expect = 3e-43
 Identities = 85/94 (90%), Positives = 88/94 (93%)
 Frame = +3

Query: 3   EDGVFIPTDVKVKQMKGARPDCITVQKKFSRDGVVTVTAYEVRDKPSALKAEDWDRVVAV 182
           EDGVFIPTDVK KQMKGA+PDC+TVQKKFSRD VV   AYEVRDKPSALK EDWDRVVAV
Sbjct: 174 EDGVFIPTDVKAKQMKGAKPDCVTVQKKFSRDRVVM--AYEVRDKPSALKTEDWDRVVAV 231

Query: 183 FVLGKEWQFKDWPFKDHVEIFNKIIGFFMRFEDD 284
           FVLGKEWQFKDWPFKDHVEIFNKIIGF+MRFEDD
Sbjct: 232 FVLGKEWQFKDWPFKDHVEIFNKIIGFYMRFEDD 265


>ref|XP_002282888.1| PREDICTED: parafibromin-like [Vitis vinifera]
          Length = 413

 Score =  179 bits (453), Expect = 3e-43
 Identities = 85/94 (90%), Positives = 88/94 (93%)
 Frame = +3

Query: 3   EDGVFIPTDVKVKQMKGARPDCITVQKKFSRDGVVTVTAYEVRDKPSALKAEDWDRVVAV 182
           EDGVFIPTDVK KQMKGA+PDC+TVQKKFSRD VV   AYEVRDKPSALK EDWDRVVAV
Sbjct: 275 EDGVFIPTDVKAKQMKGAKPDCVTVQKKFSRDRVVM--AYEVRDKPSALKTEDWDRVVAV 332

Query: 183 FVLGKEWQFKDWPFKDHVEIFNKIIGFFMRFEDD 284
           FVLGKEWQFKDWPFKDHVEIFNKIIGF+MRFEDD
Sbjct: 333 FVLGKEWQFKDWPFKDHVEIFNKIIGFYMRFEDD 366


>ref|XP_003537641.1| PREDICTED: parafibromin-like [Glycine max]
          Length = 389

 Score =  178 bits (452), Expect = 3e-43
 Identities = 85/94 (90%), Positives = 88/94 (93%)
 Frame = +3

Query: 3   EDGVFIPTDVKVKQMKGARPDCITVQKKFSRDGVVTVTAYEVRDKPSALKAEDWDRVVAV 182
           EDGV+IPTDVKVKQMKGARPDC+TVQKK SRD VVT  AYEVRDKPS LK +DWDRVVAV
Sbjct: 251 EDGVYIPTDVKVKQMKGARPDCVTVQKKLSRDRVVT--AYEVRDKPSTLKPDDWDRVVAV 308

Query: 183 FVLGKEWQFKDWPFKDHVEIFNKIIGFFMRFEDD 284
           FVLGKEWQFKDWPFKDHVEIFNKIIGFFMRFEDD
Sbjct: 309 FVLGKEWQFKDWPFKDHVEIFNKIIGFFMRFEDD 342


Top