BLASTX nr result

ID: Coptis25_contig00014709 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00014709
         (793 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002325770.1| predicted protein [Populus trichocarpa] gi|2...   298   7e-79
ref|XP_002281254.1| PREDICTED: activating signal cointegrator 1-...   289   4e-76
ref|XP_002272470.1| PREDICTED: uncharacterized protein LOC100246...   286   3e-75
ref|XP_002319652.1| predicted protein [Populus trichocarpa] gi|2...   286   3e-75
ref|XP_002521967.1| conserved hypothetical protein [Ricinus comm...   286   4e-75

>ref|XP_002325770.1| predicted protein [Populus trichocarpa] gi|222862645|gb|EEF00152.1|
           predicted protein [Populus trichocarpa]
          Length = 221

 Score =  298 bits (764), Expect = 7e-79
 Identities = 142/216 (65%), Positives = 163/216 (75%)
 Frame = +3

Query: 132 GGNQNQCLTMHQPWASLLVHGIKRIEGRSWPAILRGRLWIHAAAKVPDSATIKTMEDFYR 311
           G   N CLTMHQPWASLLV+GIKRIEGRSW   +RGRLWIHAA+KVP+  TIKTMEDFYR
Sbjct: 1   GNYTNPCLTMHQPWASLLVYGIKRIEGRSWTTPIRGRLWIHAASKVPEEDTIKTMEDFYR 60

Query: 312 EIYAVNGITDLKFPENYPVSXXXXXXXXXXXXXXXXXXSWEEVPEGVRLEGQTKFCWLCE 491
           EIYAVNGITDLKFPE+YPVS                  SWE VPEGVRLEGQT FCWLCE
Sbjct: 61  EIYAVNGITDLKFPEHYPVSRLLGCVEVVGCVKCEELASWEAVPEGVRLEGQTDFCWLCE 120

Query: 492 KPQKLIVPLEMRGYQDVYNLERKIYEVAVKGLCSVEGPLPVNFPLPDPQNPFSLKPGSLN 671
           +PQKL+VP EMRGYQ VYNLERK+Y  A++GL  V+GP+PV FPLP+PQ+PFSLKPGS++
Sbjct: 121 QPQKLLVPFEMRGYQGVYNLERKVYAAAIRGLVPVKGPMPVKFPLPNPQDPFSLKPGSIS 180

Query: 672 TSFSGSKASQIEKPPNLSXXXXXXXXXXTQFSRKEQ 779
             FS +KAS +EK   LS          TQF++K+Q
Sbjct: 181 VGFSDNKASVVEKSEGLSAAIAGARAAATQFNKKDQ 216


>ref|XP_002281254.1| PREDICTED: activating signal cointegrator 1-like [Vitis vinifera]
          Length = 266

 Score =  289 bits (740), Expect = 4e-76
 Identities = 142/220 (64%), Positives = 162/220 (73%)
 Frame = +3

Query: 132 GGNQNQCLTMHQPWASLLVHGIKRIEGRSWPAILRGRLWIHAAAKVPDSATIKTMEDFYR 311
           G   N CLT+HQPWASLLV+GIKR+EGRSWPA LRGRLWIHAA+KVPDS TIK ME+FYR
Sbjct: 7   GNYTNPCLTLHQPWASLLVYGIKRVEGRSWPAPLRGRLWIHAASKVPDSDTIKAMENFYR 66

Query: 312 EIYAVNGITDLKFPENYPVSXXXXXXXXXXXXXXXXXXSWEEVPEGVRLEGQTKFCWLCE 491
           EIYAVNGI DLKFPE+YPVS                   W+EVPEGVRLE QT+FCWLCE
Sbjct: 67  EIYAVNGIADLKFPEHYPVSRLLGCVEVVGCVKCEELACWKEVPEGVRLEAQTEFCWLCE 126

Query: 492 KPQKLIVPLEMRGYQDVYNLERKIYEVAVKGLCSVEGPLPVNFPLPDPQNPFSLKPGSLN 671
           +PQKLI+P EMRGYQ +YNLERKIYE AV+GL  V+ PLPV F LP+PQ+P SLKPGSL 
Sbjct: 127 QPQKLIIPFEMRGYQRIYNLERKIYEAAVRGLRPVQAPLPVKFLLPEPQDPLSLKPGSLV 186

Query: 672 TSFSGSKASQIEKPPNLSXXXXXXXXXXTQFSRKEQRHQN 791
           + F GSKA++ +KP  L           TQFS K   HQ+
Sbjct: 187 SCFDGSKAAEDKKPEGLLAAIAGARAAATQFS-KNDNHQS 225


>ref|XP_002272470.1| PREDICTED: uncharacterized protein LOC100246193 [Vitis vinifera]
           gi|296087873|emb|CBI35156.3| unnamed protein product
           [Vitis vinifera]
          Length = 316

 Score =  286 bits (733), Expect = 3e-75
 Identities = 138/217 (63%), Positives = 160/217 (73%)
 Frame = +3

Query: 141 QNQCLTMHQPWASLLVHGIKRIEGRSWPAILRGRLWIHAAAKVPDSATIKTMEDFYREIY 320
           +N CLTMHQPWASLLV+GIKRIEGRSWPA +RGRLWIHAA+KVPD AT+K ME+FY+EIY
Sbjct: 10  RNPCLTMHQPWASLLVYGIKRIEGRSWPAPIRGRLWIHAASKVPDEATVKAMEEFYKEIY 69

Query: 321 AVNGITDLKFPENYPVSXXXXXXXXXXXXXXXXXXSWEEVPEGVRLEGQTKFCWLCEKPQ 500
           AV+GI DLKFPENYPVS                   W+EV EGVRLE  T FCWLCE+PQ
Sbjct: 70  AVDGIYDLKFPENYPVSRLLGCVQVVGCSKREELACWKEVSEGVRLEALTDFCWLCEQPQ 129

Query: 501 KLIVPLEMRGYQDVYNLERKIYEVAVKGLCSVEGPLPVNFPLPDPQNPFSLKPGSLNTSF 680
           KL+VP EMRG Q VY+LERKIYE AV+GL  VE PLP+ FPLP+P+NPFSLKPGS+   F
Sbjct: 130 KLLVPFEMRGNQGVYDLERKIYEAAVRGLAPVESPLPIKFPLPNPRNPFSLKPGSIFARF 189

Query: 681 SGSKASQIEKPPNLSXXXXXXXXXXTQFSRKEQRHQN 791
             SKA+++EK   LS          TQFS+K+Q   N
Sbjct: 190 PESKATEMEKSSTLSSAIAGAQAAATQFSKKDQSSHN 226


>ref|XP_002319652.1| predicted protein [Populus trichocarpa] gi|222858028|gb|EEE95575.1|
           predicted protein [Populus trichocarpa]
          Length = 236

 Score =  286 bits (733), Expect = 3e-75
 Identities = 141/225 (62%), Positives = 163/225 (72%), Gaps = 10/225 (4%)
 Frame = +3

Query: 132 GGNQNQCLTMHQPWASLLVHGIKRIEGRSWPAILRGRLWIHAAAKVPDSATIKTMEDFYR 311
           G   N CLTMHQPWASLLV+GIKRIEGRSW A +RG LWIHAA+KVP+  TIK MEDFYR
Sbjct: 12  GNYSNPCLTMHQPWASLLVYGIKRIEGRSWTAPIRGCLWIHAASKVPEEDTIKAMEDFYR 71

Query: 312 EIYAVNGITDLKFPENYPVSXXXXXXXXXXXXXXXXXX----------SWEEVPEGVRLE 461
           EIYA NGITD+KFPE+YPVS                            SWE VPEGVRLE
Sbjct: 72  EIYAANGITDIKFPEHYPVSRLLGIWASVLLMSWCVDVVGCVRCDELASWEAVPEGVRLE 131

Query: 462 GQTKFCWLCEKPQKLIVPLEMRGYQDVYNLERKIYEVAVKGLCSVEGPLPVNFPLPDPQN 641
           GQT FCWLCE+P+KL+VP EMRGYQ VYNLE+KIYE AV+GL SVEGP+PV FPLPDPQ+
Sbjct: 132 GQTDFCWLCEQPKKLLVPFEMRGYQRVYNLEKKIYEAAVRGLVSVEGPMPVKFPLPDPQD 191

Query: 642 PFSLKPGSLNTSFSGSKASQIEKPPNLSXXXXXXXXXXTQFSRKE 776
           PFSLKPGS++  FS ++AS +EK  +LS          TQF++K+
Sbjct: 192 PFSLKPGSISEEFSENEASGVEKSESLSAAIAGARAAATQFNKKD 236


>ref|XP_002521967.1| conserved hypothetical protein [Ricinus communis]
           gi|223538771|gb|EEF40371.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 328

 Score =  286 bits (732), Expect = 4e-75
 Identities = 138/216 (63%), Positives = 161/216 (74%)
 Frame = +3

Query: 132 GGNQNQCLTMHQPWASLLVHGIKRIEGRSWPAILRGRLWIHAAAKVPDSATIKTMEDFYR 311
           G   N CLTMHQPWASLLV+GIKRIEGRSWP+ +RGRLWIHAA+KVP+ ATIK MEDFYR
Sbjct: 7   GNYTNPCLTMHQPWASLLVYGIKRIEGRSWPSPVRGRLWIHAASKVPEEATIKAMEDFYR 66

Query: 312 EIYAVNGITDLKFPENYPVSXXXXXXXXXXXXXXXXXXSWEEVPEGVRLEGQTKFCWLCE 491
           EIYAVNGITD+KFPE+YPVS                  SWE  PEG RLEGQT FCWLCE
Sbjct: 67  EIYAVNGITDIKFPEHYPVSRLLGCVEVVGCVRCEELASWEATPEGARLEGQTDFCWLCE 126

Query: 492 KPQKLIVPLEMRGYQDVYNLERKIYEVAVKGLCSVEGPLPVNFPLPDPQNPFSLKPGSLN 671
           +PQKL+VP EMRGYQ VYNLE+KI+E AV+GL  V+GP+PV FPLP+P +PFSLKPGS++
Sbjct: 127 QPQKLLVPFEMRGYQGVYNLEKKIFEAAVRGLTPVKGPMPVTFPLPNPCDPFSLKPGSIS 186

Query: 672 TSFSGSKASQIEKPPNLSXXXXXXXXXXTQFSRKEQ 779
                 KASQ+EK  +L+          TQF++K Q
Sbjct: 187 MQLL-DKASQVEKSASLTTAIAGARAAATQFNKKGQ 221


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