BLASTX nr result
ID: Coptis25_contig00014675
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00014675
(1383 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI31025.3| unnamed protein product [Vitis vinifera] 298 3e-78
ref|XP_002263657.1| PREDICTED: GDP-L-galactose phosphorylase 1-l... 297 5e-78
ref|NP_001067256.1| Os12g0612100 [Oryza sativa Japonica Group] g... 202 1e-49
ref|XP_003577487.1| PREDICTED: GDP-L-galactose phosphorylase 1-l... 196 1e-47
dbj|BAJ89803.1| predicted protein [Hordeum vulgare subsp. vulgare] 193 1e-46
>emb|CBI31025.3| unnamed protein product [Vitis vinifera]
Length = 376
Score = 298 bits (762), Expect = 3e-78
Identities = 168/356 (47%), Positives = 232/356 (65%), Gaps = 7/356 (1%)
Frame = +1
Query: 337 VTVKQCEDDYCLMKHSATSELSKCPSLDLQGTRVPIFMFGSQSSLDSCAYGGIFNTL--E 510
+ VKQ +DD L+K AT + +KCP ++P++ F SQS DS +G F+ + +
Sbjct: 1 MVVKQLKDDNFLLK-CATPDQAKCPQFSFGSIQIPLYCFASQSLDDSGPFGR-FSCIPDD 58
Query: 511 EQSXXXXXXXAQWEDRAWKGLFNYDVTTCEMKVTNGLKKFVTQLNEERSVLNYLPVLKEK 690
E S AQWEDR WKG++ YDVTT E+K+ G +KF+ QLNEE + +++L E
Sbjct: 59 EPSTLESLLLAQWEDRMWKGIYRYDVTTSEIKIIGGRRKFLAQLNEEWN-MDHLSDPDEN 117
Query: 691 GVRHQLYPIIHNCKIPHMEEFLFAVTTGEKALPKLIQSASVPEDVNLSIIINANPVDYGH 870
V + I N + H EE LF V +GEKA+P+LI +A VP + ++ ++ N PV+YGH
Sbjct: 118 EVCWRGDSFIFNW-VKHHEELLFCVASGEKAIPELIPTAPVP-NASILVLSNVTPVEYGH 175
Query: 871 VFLLPSGYCGLSRILDSRLLEMVTRFALEINNCSFRIFYDFSASNSNQQCVQACYLAIPL 1050
VFL+P G+ +S+ +D+R LEMVTR A+E+NN SFR+FYD S +++ QACY + PL
Sbjct: 176 VFLVPHGFTSISQFMDARSLEMVTRVAMEVNNRSFRVFYDCSMPSASLY-FQACYFSNPL 234
Query: 1051 PVESMPVATLSGNWGERGLHISEVTDYPIKALSFKGYGNLKLLVEVVSEICSCLQKLNNP 1230
PVE MPV TL N G G I + DYPIKAL F+ N+K+ VEV++EICSCLQ N P
Sbjct: 235 PVEVMPVVTLWDN-GLGGTRICSLIDYPIKALLFESKSNVKVSVEVLAEICSCLQGKNIP 293
Query: 1231 YSLLITDFGTNMMLFPQNTCCS-----LSALECGGHFVFKTKHEFDQASEEALLKR 1383
YS LI+D G + LFPQ S LS+ EC GHFVFK++++FDQ +EEA+L+R
Sbjct: 294 YSFLISDCGKRIFLFPQQMRASANSHALSSWECSGHFVFKSRNDFDQVTEEAMLER 349
>ref|XP_002263657.1| PREDICTED: GDP-L-galactose phosphorylase 1-like [Vitis vinifera]
Length = 375
Score = 297 bits (760), Expect = 5e-78
Identities = 167/355 (47%), Positives = 232/355 (65%), Gaps = 6/355 (1%)
Frame = +1
Query: 337 VTVKQCEDDYCLMKHSATSELSKCPSLDLQGTRVPIFMFGSQSSLDSCAYGGIFNTL--E 510
+ VKQ +DD L+K AT + +KCP ++P++ F SQS DS +G F+ + +
Sbjct: 1 MVVKQLKDDNFLLK-CATPDQAKCPQFSFGSIQIPLYCFASQSLDDSGPFGR-FSCIPDD 58
Query: 511 EQSXXXXXXXAQWEDRAWKGLFNYDVTTCEMKVTNGLKKFVTQLNEERSVLNYLPVLKEK 690
E S AQWEDR WKG++ YDVTT E+K+ G +KF+ QLNEE + +++L E
Sbjct: 59 EPSTLESLLLAQWEDRMWKGIYRYDVTTSEIKIIGGRRKFLAQLNEEWN-MDHLSDPDEN 117
Query: 691 GVRHQLYPIIHNCKIPHMEEFLFAVTTGEKALPKLIQSASVPEDVNLSIIINANPVDYGH 870
V + I N + H EE LF V +GEKA+P+LI +A VP + ++ ++ N PV+YGH
Sbjct: 118 EVCWRGDSFIFNW-VKHHEELLFCVASGEKAIPELIPTAPVP-NASILVLSNVTPVEYGH 175
Query: 871 VFLLPSGYCGLSRILDSRLLEMVTRFALEINNCSFRIFYDFSASNSNQQCVQACYLAIPL 1050
VFL+P G+ +S+ +D+R LEMVTR A+E+NN SFR+FYD S +++ QACY + PL
Sbjct: 176 VFLVPHGFTSISQFMDARSLEMVTRVAMEVNNRSFRVFYDCSMPSASLY-FQACYFSNPL 234
Query: 1051 PVESMPVATLSGNWGERGLHISEVTDYPIKALSFKGYGNLKLLVEVVSEICSCLQKLNNP 1230
PVE MPV TL N G G I + DYPIKAL F+ N+K+ VEV++EICSCLQ N P
Sbjct: 235 PVEVMPVVTLWDN-GLGGTRICSLIDYPIKALLFESKSNVKVSVEVLAEICSCLQGKNIP 293
Query: 1231 YSLLITDFGTNMMLFPQNTCC----SLSALECGGHFVFKTKHEFDQASEEALLKR 1383
YS LI+D G + LFPQ +LS+ EC GHFVFK++++FDQ +EEA+L+R
Sbjct: 294 YSFLISDCGKRIFLFPQMRASANSHALSSWECSGHFVFKSRNDFDQVTEEAMLER 348
>ref|NP_001067256.1| Os12g0612100 [Oryza sativa Japonica Group] gi|77556583|gb|ABA99379.1|
VTC2, putative, expressed [Oryza sativa Japonica Group]
gi|113649763|dbj|BAF30275.1| Os12g0612100 [Oryza sativa
Japonica Group] gi|215678716|dbj|BAG95153.1| unnamed
protein product [Oryza sativa Japonica Group]
gi|222617464|gb|EEE53596.1| hypothetical protein
OsJ_36845 [Oryza sativa Japonica Group]
Length = 368
Score = 202 bits (515), Expect = 1e-49
Identities = 129/362 (35%), Positives = 187/362 (51%), Gaps = 12/362 (3%)
Frame = +1
Query: 334 MVTVKQCEDDYCLMKHSATSELSKCPSLDLQGTRVPIFMFGSQ---SSLDSCAYGGIFNT 504
MV+ + + +Y L K P +G + ++ G++ +L S AY
Sbjct: 1 MVSTTEFKGEYSLPS-------KKSPLDQFEGVKTHLYRLGAEHENGTLKSFAY----TD 49
Query: 505 LEEQSXXXXXXXAQWEDRAWKGLFNYDVTTCEMKVTNGLKKFVTQLNEERSVLNYLPVLK 684
S +QWED AWKG F YDVT C +KV G FV QLN++ + VLK
Sbjct: 50 QGSPSLLDTIILSQWEDYAWKGHFGYDVTACNLKVVEGGWSFVVQLNDKWNSC----VLK 105
Query: 685 EKGVRHQLYPIIHNCKIPHM----EEFLFAVTTGEKALPKLIQSASVPEDVNLSIIINAN 852
E H + C P+ +E L + G+K +P+++ S P+D L +I NA
Sbjct: 106 E----HDKFLEPVGCLKPNCMNSYDELLLCIAQGDKDIPEVVPSTKPPKD-GLLLIANAY 160
Query: 853 PVDYGHVFLLPSGYCGLSRILDSRLLEMVTRFALEINNCSFRIFYDFSASN-SNQQCVQA 1029
PV+YGH+FL+PS LS D R+ ++ R A E+N+ +FR+F+D S + QA
Sbjct: 161 PVEYGHIFLVPSATNQLSFFWDKRMFSLIARIASEVNSAAFRVFFDSCTSTMPDHMFFQA 220
Query: 1030 CYLAIPLPVESMPVATLSGNWGERGLHISEVTDYPIKALSFKGYGNLKLLVEVVSEICSC 1209
CY A PLPVES + +H+ E+ DYP+KAL G ++ L VSE+
Sbjct: 221 CYFANPLPVESASTVAIYHGKATSAVHLYEIIDYPMKALVLTG-KDVNTLANFVSEVSLT 279
Query: 1210 LQKLNNPYSLLITDFGTNMMLFPQ----NTCCSLSALECGGHFVFKTKHEFDQASEEALL 1377
L N YSLLI++ GT + LFPQ T C LSA EC G+F+++ K++FD+ASE +
Sbjct: 280 LHDNNTAYSLLISNNGTKVFLFPQVKNLATGCCLSAWECSGYFIYRAKYDFDRASENEIS 339
Query: 1378 KR 1383
R
Sbjct: 340 NR 341
>ref|XP_003577487.1| PREDICTED: GDP-L-galactose phosphorylase 1-like [Brachypodium
distachyon]
Length = 369
Score = 196 bits (498), Expect = 1e-47
Identities = 116/281 (41%), Positives = 166/281 (59%), Gaps = 6/281 (2%)
Frame = +1
Query: 541 AQWEDRAWKGLFNYDVTTCEMKVTNGLKKFVTQLNEERSVLNYLPVLKEKG-VRHQLYPI 717
+QWE+ A +G YDVTTC++KV G + FV Q+N++ +LKE G R L +
Sbjct: 63 SQWENFAREGHLGYDVTTCKLKVIEGERNFVVQMNDKWDSF----LLKEYGKFRQPLGCL 118
Query: 718 IHNCKIPHMEEFLFAVTTGEKALPKLIQSASVPEDVNLSIIINANPVDYGHVFLLPSGYC 897
+C H EE L + GEK +P+++ SA+ P + + +I NA PV+YGH+FL+PS
Sbjct: 119 KPDCTESH-EELLLCIAQGEKDVPEVVPSAT-PVNDGVLLIANAYPVEYGHIFLVPSATN 176
Query: 898 GLSRILDSRLLEMVTRFALEINNCSFRIFYDFSAS-NSNQQCVQACYLAIPLPVESMPVA 1074
L+ D R+ ++ R A E+NN +FR+F+D S ++ +ACY A PLPVES
Sbjct: 177 QLTSFWDRRMFGLIMRSASEVNNAAFRVFFDDGTSIVPDRMFFEACYFANPLPVESASTV 236
Query: 1075 TLSGNWGERGLHISEVTDYPIKALSFKGYGNLKLLVEVVSEICSCLQKLNNPYSLLITDF 1254
+ G+ + E+ DYP+KAL F N+ LV VVSE+ S L + YSLLI++
Sbjct: 237 AIYDGKARSGIRVYEIVDYPLKALVFTS-NNVNALVNVVSEVSSTLHENKTAYSLLISNH 295
Query: 1255 GTNMMLFPQN----TCCSLSALECGGHFVFKTKHEFDQASE 1365
G N+ LFPQ T C L A EC G+FV+ TK +FD+ASE
Sbjct: 296 GRNVCLFPQAKSLVTGCCLPAWECCGYFVYGTKADFDKASE 336
>dbj|BAJ89803.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 369
Score = 193 bits (490), Expect = 1e-46
Identities = 112/290 (38%), Positives = 166/290 (57%), Gaps = 9/290 (3%)
Frame = +1
Query: 541 AQWEDRAWKGLFNYDVTTCEMKVTNGLKKFVTQLNEERSVLNYLPVLKEKGVRHQLYPII 720
+QWE+ A KG YDVTTCE+KV G + FV Q+N++ + + LK ++ + +
Sbjct: 63 SQWENFAQKGQLGYDVTTCELKVIEGQRDFVIQMNDKWNSFS----LK----KYDKFGLP 114
Query: 721 HNCKIPHM----EEFLFAVTTGEKALPKLIQSASVPEDVNLSIIINANPVDYGHVFLLPS 888
C P+ EE L + GE + P+++ S + P + + +I NA PV+YGH+FL+P+
Sbjct: 115 FGCLKPNSGRSYEELLLCIAEGENSEPEVVPSTTPPNN-GVLLIANAYPVEYGHIFLVPN 173
Query: 889 GYCGLSRILDSRLLEMVTRFALEINNCSFRIFYDFSAS-NSNQQCVQACYLAIPLPVESM 1065
LS D R+ ++T+ A E+N+ +FR+F+D S QACY A PLPVES
Sbjct: 174 ATNQLSSFWDKRMFGLITKIASEVNSAAFRVFFDDGTSIVPKHMFFQACYFANPLPVESA 233
Query: 1066 PVATLSGNWGERGLHISEVTDYPIKALSFKGYGNLKLLVEVVSEICSCLQKLNNPYSLLI 1245
L G+ +SE+ DYP+KA+ F N+ L++VVS C L + N +SL+I
Sbjct: 234 STVALYDGTTRSGICVSEIVDYPLKAIVFTS-NNVNALIDVVSAACLALHENNTAHSLMI 292
Query: 1246 TDFGTNMMLFPQ----NTCCSLSALECGGHFVFKTKHEFDQASEEALLKR 1383
++ G N LFPQ T C LSA EC G+FV+ TK +F+QASE + R
Sbjct: 293 SNNGRNAFLFPQVKNLVTGCYLSAWECCGYFVYHTKVDFEQASETGISNR 342