BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00014662
         (1313 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002519077.1| ATP-dependent Clp protease proteolytic subun...   358   2e-96
ref|XP_003537887.1| PREDICTED: ATP-dependent Clp protease proteo...   356   6e-96
gb|ACU18559.1| unknown [Glycine max]                                  352   9e-95
gb|AFK45588.1| unknown [Lotus japonicus]                              351   2e-94
ref|XP_003541065.1| PREDICTED: ATP-dependent Clp protease proteo...   351   3e-94

>ref|XP_002519077.1| ATP-dependent Clp protease proteolytic subunit, putative [Ricinus
            communis] gi|223541740|gb|EEF43288.1| ATP-dependent Clp
            protease proteolytic subunit, putative [Ricinus communis]
          Length = 277

 Score =  358 bits (918), Expect = 2e-96
 Identities = 176/222 (79%), Positives = 191/222 (86%)
 Frame = -3

Query: 1146 NNNTGLPFKFDDQIHHRPIHTSYGPIEAKKGNPPVMPAVMTPGGPLDLSSVLFRNRIIFI 967
            +  +GLP   D++  HR    SY  IEAKKGNPP+MPAVMTPGGPLDL SVLFRNRIIFI
Sbjct: 57   SRRSGLPLSIDEKNSHRATQ-SYITIEAKKGNPPIMPAVMTPGGPLDLQSVLFRNRIIFI 115

Query: 966  GQPINSQVAQRVISQLVTLATIDEDADILIYLNCPGGSTYSVLAIYDCMSWIKPKVGTVC 787
            GQPINSQVAQRVISQLVTLATIDE++DIL+YLNCPGGSTYSVLAIYDCMSWIKPKVGTVC
Sbjct: 116  GQPINSQVAQRVISQLVTLATIDENSDILMYLNCPGGSTYSVLAIYDCMSWIKPKVGTVC 175

Query: 786  FXXXXXXXXXXXXXGEKGMRYAMPNARIMIHQPQSGCGGHVEDVRRQVNEAVQARHKIDK 607
            F             GEKGMRYAMPNARIMIHQPQ GCGGHVEDVRRQVNEAVQ+RHK+D+
Sbjct: 176  FGVAASQGALLLAGGEKGMRYAMPNARIMIHQPQGGCGGHVEDVRRQVNEAVQSRHKVDR 235

Query: 606  MYAAFTGQPFEEIQNYTERDRFFSTSEALEFGLIDGVLETEY 481
            MYAAFTGQP E++Q YTERDRF STSEA+EFGLIDG+LETEY
Sbjct: 236  MYAAFTGQPLEKVQQYTERDRFLSTSEAMEFGLIDGILETEY 277


>ref|XP_003537887.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit 6,
            chloroplastic-like [Glycine max]
          Length = 273

 Score =  356 bits (914), Expect = 6e-96
 Identities = 182/238 (76%), Positives = 195/238 (81%)
 Frame = -3

Query: 1194 SGTQNPRGLSFVSNNVNNNTGLPFKFDDQIHHRPIHTSYGPIEAKKGNPPVMPAVMTPGG 1015
            S   NP G S      + + G P K D++  H    TSYG IEAK GNPP+ PAVMTPGG
Sbjct: 38   SSLPNPYGHSSGVGLSSKSRGFPLKLDEKNIHGA-STSYGAIEAK-GNPPITPAVMTPGG 95

Query: 1014 PLDLSSVLFRNRIIFIGQPINSQVAQRVISQLVTLATIDEDADILIYLNCPGGSTYSVLA 835
            PLDLSSVLFRNRIIFIGQP+NSQVAQRVISQLVTLATIDE+ADIL+Y+NCPGGSTYSVLA
Sbjct: 96   PLDLSSVLFRNRIIFIGQPVNSQVAQRVISQLVTLATIDENADILVYINCPGGSTYSVLA 155

Query: 834  IYDCMSWIKPKVGTVCFXXXXXXXXXXXXXGEKGMRYAMPNARIMIHQPQSGCGGHVEDV 655
            IYDCMSWIKPKVGTVCF             GEKGMRYAMPNARIMIHQPQSGCGGHVEDV
Sbjct: 156  IYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNARIMIHQPQSGCGGHVEDV 215

Query: 654  RRQVNEAVQARHKIDKMYAAFTGQPFEEIQNYTERDRFFSTSEALEFGLIDGVLETEY 481
            RRQVNEAVQ+RHKIDKMY+ FTGQP E++Q YTERDRF S SEALEFGLIDGVLETEY
Sbjct: 216  RRQVNEAVQSRHKIDKMYSVFTGQPLEKVQQYTERDRFLSVSEALEFGLIDGVLETEY 273


>gb|ACU18559.1| unknown [Glycine max]
          Length = 273

 Score =  352 bits (904), Expect = 9e-95
 Identities = 180/238 (75%), Positives = 193/238 (81%)
 Frame = -3

Query: 1194 SGTQNPRGLSFVSNNVNNNTGLPFKFDDQIHHRPIHTSYGPIEAKKGNPPVMPAVMTPGG 1015
            S   NP G S      + + G P K D++  H    TSYG IEAK GNPP+ PAVMTPGG
Sbjct: 38   SSLPNPYGHSSGVGLSSKSRGFPLKLDEKNIHGA-STSYGAIEAK-GNPPITPAVMTPGG 95

Query: 1014 PLDLSSVLFRNRIIFIGQPINSQVAQRVISQLVTLATIDEDADILIYLNCPGGSTYSVLA 835
            PLDLSSVLFRNRIIFIGQP+NSQVAQRVISQLVTLATIDE+ADIL+Y+NCPGGSTYSVLA
Sbjct: 96   PLDLSSVLFRNRIIFIGQPVNSQVAQRVISQLVTLATIDENADILVYINCPGGSTYSVLA 155

Query: 834  IYDCMSWIKPKVGTVCFXXXXXXXXXXXXXGEKGMRYAMPNARIMIHQPQSGCGGHVEDV 655
            IYDCMSWIKPKVGTVCF             GEKGMRYAMPNARIMIHQPQSGCGGHVEDV
Sbjct: 156  IYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNARIMIHQPQSGCGGHVEDV 215

Query: 654  RRQVNEAVQARHKIDKMYAAFTGQPFEEIQNYTERDRFFSTSEALEFGLIDGVLETEY 481
            RRQVNEAVQ+RHKIDKMY+ FTGQP E++Q YTERDRF S  EALEFG IDGVLETEY
Sbjct: 216  RRQVNEAVQSRHKIDKMYSVFTGQPLEKVQQYTERDRFLSVFEALEFGFIDGVLETEY 273


>gb|AFK45588.1| unknown [Lotus japonicus]
          Length = 275

 Score =  351 bits (901), Expect = 2e-94
 Identities = 173/222 (77%), Positives = 190/222 (85%)
 Frame = -3

Query: 1146 NNNTGLPFKFDDQIHHRPIHTSYGPIEAKKGNPPVMPAVMTPGGPLDLSSVLFRNRIIFI 967
            + + G P K D++  +    TSYG IEAKKGNPP+ PAVMTPGGPLDLSSVLFRNRIIFI
Sbjct: 55   SKSPGFPLKLDEKNTY-DASTSYGAIEAKKGNPPITPAVMTPGGPLDLSSVLFRNRIIFI 113

Query: 966  GQPINSQVAQRVISQLVTLATIDEDADILIYLNCPGGSTYSVLAIYDCMSWIKPKVGTVC 787
            GQP+N+QVAQRVISQLVTLATID +ADIL+Y+NCPGGSTYSVLAIYDCMSWIKPKVGTVC
Sbjct: 114  GQPVNAQVAQRVISQLVTLATIDPNADILMYINCPGGSTYSVLAIYDCMSWIKPKVGTVC 173

Query: 786  FXXXXXXXXXXXXXGEKGMRYAMPNARIMIHQPQSGCGGHVEDVRRQVNEAVQARHKIDK 607
            F             GEKGMRY+MPN+RIMIHQPQSGCGGHVEDVRRQVNEAVQ+RHKIDK
Sbjct: 174  FGVAASQGALLLAGGEKGMRYSMPNSRIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKIDK 233

Query: 606  MYAAFTGQPFEEIQNYTERDRFFSTSEALEFGLIDGVLETEY 481
            MY+AFTGQP E++Q YTERD F S SEALEFGLIDGVLETEY
Sbjct: 234  MYSAFTGQPIEKVQQYTERDHFLSVSEALEFGLIDGVLETEY 275


>ref|XP_003541065.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit 6,
            chloroplastic-like [Glycine max]
          Length = 273

 Score =  351 bits (900), Expect = 3e-94
 Identities = 179/238 (75%), Positives = 194/238 (81%)
 Frame = -3

Query: 1194 SGTQNPRGLSFVSNNVNNNTGLPFKFDDQIHHRPIHTSYGPIEAKKGNPPVMPAVMTPGG 1015
            S   NP G S      + + G P K D++  H    TSYG IEAK GNPP+ PAVMTPGG
Sbjct: 38   SSLPNPYGHSSEVGLSSKSRGFPLKHDEKNIHGA-STSYGAIEAK-GNPPITPAVMTPGG 95

Query: 1014 PLDLSSVLFRNRIIFIGQPINSQVAQRVISQLVTLATIDEDADILIYLNCPGGSTYSVLA 835
            PLDL+SVLFRNRIIFIGQP+NSQVAQRVISQLVTLATI+E+ADIL+Y+NCPGGSTYSVLA
Sbjct: 96   PLDLTSVLFRNRIIFIGQPVNSQVAQRVISQLVTLATINENADILVYINCPGGSTYSVLA 155

Query: 834  IYDCMSWIKPKVGTVCFXXXXXXXXXXXXXGEKGMRYAMPNARIMIHQPQSGCGGHVEDV 655
            IYDCMSWIKPKVGTVCF             GEKGMRYAMPNARI IHQPQSGCGGHVEDV
Sbjct: 156  IYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNARITIHQPQSGCGGHVEDV 215

Query: 654  RRQVNEAVQARHKIDKMYAAFTGQPFEEIQNYTERDRFFSTSEALEFGLIDGVLETEY 481
            RRQVNEAVQ+RHKIDKMY+ FTGQP E++Q YTERDRF S SEALEFGLIDGVLETEY
Sbjct: 216  RRQVNEAVQSRHKIDKMYSVFTGQPLEKVQQYTERDRFLSVSEALEFGLIDGVLETEY 273