BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00014619
         (405 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002532501.1| 116 kD U5 small nuclear ribonucleoprotein co...   151   1e-40
ref|XP_004139267.1| PREDICTED: 116 kDa U5 small nuclear ribonucl...   151   1e-40
ref|XP_002309312.1| predicted protein [Populus trichocarpa] gi|2...   151   1e-40
ref|XP_002267199.1| PREDICTED: 116 kDa U5 small nuclear ribonucl...   151   1e-40
ref|NP_172112.1| U5 small nuclear ribonucleoprotein component [A...   151   1e-40

>ref|XP_002532501.1| 116 kD U5 small nuclear ribonucleoprotein component, putative
           [Ricinus communis] gi|223527776|gb|EEF29877.1| 116 kD U5
           small nuclear ribonucleoprotein component, putative
           [Ricinus communis]
          Length = 992

 Score =  151 bits (381), Expect(2) = 1e-40
 Identities = 76/87 (87%), Positives = 80/87 (91%)
 Frame = -2

Query: 365 KWLRGLRKISKSYPLAITKVEESGEHTILGTGELYLDCIMKDLRELYSEVEVNVAVLVIS 186
           K + GLRKISKSYPLAITKVEESGEHTILGTGELYLD IMKDLRELYSEVEV VA  V+S
Sbjct: 621 KMVEGLRKISKSYPLAITKVEESGEHTILGTGELYLDSIMKDLRELYSEVEVKVADPVVS 680

Query: 185 FCEMVVESSSMKCFAQTPNKKNKITMV 105
           FCE VVESSSMKCFA+TPNKKNKITM+
Sbjct: 681 FCETVVESSSMKCFAETPNKKNKITMI 707



 Score = 40.4 bits (93), Expect(2) = 1e-40
 Identities = 18/18 (100%), Positives = 18/18 (100%)
 Frame = -1

Query: 405 KTATEPLNPSELPKMVEG 352
           KTATEPLNPSELPKMVEG
Sbjct: 608 KTATEPLNPSELPKMVEG 625


>ref|XP_004139267.1| PREDICTED: 116 kDa U5 small nuclear ribonucleoprotein
           component-like [Cucumis sativus]
           gi|449493675|ref|XP_004159406.1| PREDICTED: 116 kDa U5
           small nuclear ribonucleoprotein component-like [Cucumis
           sativus]
          Length = 988

 Score =  151 bits (381), Expect(2) = 1e-40
 Identities = 76/87 (87%), Positives = 80/87 (91%)
 Frame = -2

Query: 365 KWLRGLRKISKSYPLAITKVEESGEHTILGTGELYLDCIMKDLRELYSEVEVNVAVLVIS 186
           K + GLRKISKSYPLAITKVEESGEHTILGTGELYLD IMKDLRELYSEVEV VA  V+S
Sbjct: 617 KMVEGLRKISKSYPLAITKVEESGEHTILGTGELYLDSIMKDLRELYSEVEVKVADPVVS 676

Query: 185 FCEMVVESSSMKCFAQTPNKKNKITMV 105
           FCE VVESSSMKCFA+TPNKKNKITM+
Sbjct: 677 FCETVVESSSMKCFAETPNKKNKITMI 703



 Score = 40.4 bits (93), Expect(2) = 1e-40
 Identities = 18/18 (100%), Positives = 18/18 (100%)
 Frame = -1

Query: 405 KTATEPLNPSELPKMVEG 352
           KTATEPLNPSELPKMVEG
Sbjct: 604 KTATEPLNPSELPKMVEG 621


>ref|XP_002309312.1| predicted protein [Populus trichocarpa] gi|222855288|gb|EEE92835.1|
           predicted protein [Populus trichocarpa]
          Length = 988

 Score =  151 bits (381), Expect(2) = 1e-40
 Identities = 76/87 (87%), Positives = 80/87 (91%)
 Frame = -2

Query: 365 KWLRGLRKISKSYPLAITKVEESGEHTILGTGELYLDCIMKDLRELYSEVEVNVAVLVIS 186
           K + GLRKISKSYPLAITKVEESGEHTILGTGELYLD IMKDLRELYSEVEV VA  V+S
Sbjct: 618 KMVEGLRKISKSYPLAITKVEESGEHTILGTGELYLDSIMKDLRELYSEVEVKVADPVVS 677

Query: 185 FCEMVVESSSMKCFAQTPNKKNKITMV 105
           FCE VVESSSMKCFA+TPNKKNKITM+
Sbjct: 678 FCETVVESSSMKCFAETPNKKNKITMI 704



 Score = 40.4 bits (93), Expect(2) = 1e-40
 Identities = 18/18 (100%), Positives = 18/18 (100%)
 Frame = -1

Query: 405 KTATEPLNPSELPKMVEG 352
           KTATEPLNPSELPKMVEG
Sbjct: 605 KTATEPLNPSELPKMVEG 622


>ref|XP_002267199.1| PREDICTED: 116 kDa U5 small nuclear ribonucleoprotein component
           [Vitis vinifera] gi|147858113|emb|CAN81413.1|
           hypothetical protein VITISV_031170 [Vitis vinifera]
          Length = 988

 Score =  151 bits (381), Expect(2) = 1e-40
 Identities = 76/87 (87%), Positives = 80/87 (91%)
 Frame = -2

Query: 365 KWLRGLRKISKSYPLAITKVEESGEHTILGTGELYLDCIMKDLRELYSEVEVNVAVLVIS 186
           K + GLRKISKSYPLAITKVEESGEHTILGTGELYLD IMKDLRELYSEVEV VA  V+S
Sbjct: 617 KMVEGLRKISKSYPLAITKVEESGEHTILGTGELYLDSIMKDLRELYSEVEVKVADPVVS 676

Query: 185 FCEMVVESSSMKCFAQTPNKKNKITMV 105
           FCE VVESSSMKCFA+TPNKKNKITM+
Sbjct: 677 FCETVVESSSMKCFAETPNKKNKITMI 703



 Score = 40.4 bits (93), Expect(2) = 1e-40
 Identities = 18/18 (100%), Positives = 18/18 (100%)
 Frame = -1

Query: 405 KTATEPLNPSELPKMVEG 352
           KTATEPLNPSELPKMVEG
Sbjct: 604 KTATEPLNPSELPKMVEG 621


>ref|NP_172112.1| U5 small nuclear ribonucleoprotein component [Arabidopsis thaliana]
           gi|30679607|ref|NP_849600.1| U5 small nuclear
           ribonucleoprotein component [Arabidopsis thaliana]
           gi|8844127|gb|AAF80219.1|AC025290_8 Contains similarity
           to an U5 snRNP-specific protein 116 kD from Homo sapiens
           gi|4759280 and contains elongation factor G C-terminus
           PF|00679 and is a member of the elongation factor Tu
           family PF|00009 [Arabidopsis thaliana]
           gi|110741512|dbj|BAE98706.1| elongation factor like
           protein [Arabidopsis thaliana]
           gi|332189840|gb|AEE27961.1| U5 small nuclear
           ribonucleoprotein component [Arabidopsis thaliana]
           gi|332189841|gb|AEE27962.1| U5 small nuclear
           ribonucleoprotein component [Arabidopsis thaliana]
          Length = 987

 Score =  151 bits (381), Expect(2) = 1e-40
 Identities = 76/87 (87%), Positives = 80/87 (91%)
 Frame = -2

Query: 365 KWLRGLRKISKSYPLAITKVEESGEHTILGTGELYLDCIMKDLRELYSEVEVNVAVLVIS 186
           K + GLRKISKSYPLAITKVEESGEHTILGTGELYLD IMKDLRELYSEVEV VA  V+S
Sbjct: 616 KMVEGLRKISKSYPLAITKVEESGEHTILGTGELYLDSIMKDLRELYSEVEVKVADPVVS 675

Query: 185 FCEMVVESSSMKCFAQTPNKKNKITMV 105
           FCE VVESSSMKCFA+TPNKKNKITM+
Sbjct: 676 FCETVVESSSMKCFAETPNKKNKITMI 702



 Score = 40.4 bits (93), Expect(2) = 1e-40
 Identities = 18/18 (100%), Positives = 18/18 (100%)
 Frame = -1

Query: 405 KTATEPLNPSELPKMVEG 352
           KTATEPLNPSELPKMVEG
Sbjct: 603 KTATEPLNPSELPKMVEG 620