BLASTX nr result

ID: Coptis25_contig00014613 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00014613
         (1107 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283875.1| PREDICTED: uncharacterized protein LOC100246...   305   1e-80
ref|XP_002305164.1| predicted protein [Populus trichocarpa] gi|2...   295   1e-77
ref|XP_002521222.1| conserved hypothetical protein [Ricinus comm...   283   7e-74
gb|ADH82117.1| neoxanthin synthase [Citrus sinensis]                  268   1e-69
ref|XP_002329286.1| predicted protein [Populus trichocarpa] gi|2...   255   2e-65

>ref|XP_002283875.1| PREDICTED: uncharacterized protein LOC100246370 [Vitis vinifera]
           gi|296087274|emb|CBI33648.3| unnamed protein product
           [Vitis vinifera]
          Length = 246

 Score =  305 bits (781), Expect = 1e-80
 Identities = 159/238 (66%), Positives = 183/238 (76%)
 Frame = -2

Query: 914 TSTFCLQSHFSLKISQSWKAMPADFTLRQEQRSISNLGGTRAEVFGQRVARLGTVVSNEW 735
           +S FC QS  S KI +S  A+      R++QRS   L G   E+FGQ+VAR G + S+EW
Sbjct: 4   SSCFC-QSQISFKIDRSAVAIRPQCHTRKDQRSTFALKGMSTELFGQQVARAGAMRSSEW 62

Query: 734 SFLGGSRIILHQKVARSVPNGKASGVNASWFTSSQIANNAFTLGTVAVLPFYTFMVLAPK 555
           SF+ GSRII+  KVAR V   K SGV ASW  + QIA++ FTLGT AVLPFYT MVLAP 
Sbjct: 63  SFMRGSRIIIRPKVARFVFYRKGSGVYASWLANPQIASSVFTLGTAAVLPFYTLMVLAPT 122

Query: 554 AELTKKSMESVIPYIVXXXXXXXXXXLSWAPDTLQMMFASKYWLPELPGIAKMFSHEMTM 375
           AELTKKSMES IPY+V          LSW PDT+++MFASKYWLPELPG+AKMFS+EMT+
Sbjct: 123 AELTKKSMESTIPYVVLGLLYAYLLYLSWTPDTIRLMFASKYWLPELPGMAKMFSNEMTL 182

Query: 374 ASAWIHLLAVDLFAARQVFRDGLANNIETRHSVSLCLLFCPIGIVTHVITKALTKTVG 201
           ASAWIHLLA+DLFAARQVF+DGL N IETRHSVSLCLLFCPIGIVTHVITKALTK+ G
Sbjct: 183 ASAWIHLLAIDLFAARQVFQDGLENKIETRHSVSLCLLFCPIGIVTHVITKALTKSAG 240


>ref|XP_002305164.1| predicted protein [Populus trichocarpa] gi|222848128|gb|EEE85675.1|
           predicted protein [Populus trichocarpa]
          Length = 246

 Score =  295 bits (756), Expect = 1e-77
 Identities = 151/239 (63%), Positives = 182/239 (76%)
 Frame = -2

Query: 914 TSTFCLQSHFSLKISQSWKAMPADFTLRQEQRSISNLGGTRAEVFGQRVARLGTVVSNEW 735
           +S FC    FSLK   S   + +   + ++++  S+L     E+FGQRVAR+G  +  +W
Sbjct: 4   SSCFCYPQ-FSLKNDCSGLTIRSHHIVGKDRKLFSSLRSNSIELFGQRVARVGADLHRDW 62

Query: 734 SFLGGSRIILHQKVARSVPNGKASGVNASWFTSSQIANNAFTLGTVAVLPFYTFMVLAPK 555
           +FLGGSRII+H K+   +   K+SGVNASW TSSQIA++ FTLGT AVLPFYT MV+APK
Sbjct: 63  NFLGGSRIIVHPKLTNFLVYRKSSGVNASWLTSSQIASSVFTLGTAAVLPFYTLMVVAPK 122

Query: 554 AELTKKSMESVIPYIVXXXXXXXXXXLSWAPDTLQMMFASKYWLPELPGIAKMFSHEMTM 375
           AE+T+KSMES IPYIV          LSW PDT+++MFAS+YWLPELPGIAKMFS+EMT+
Sbjct: 123 AEVTRKSMESSIPYIVLGLLYAFLLYLSWTPDTMRLMFASQYWLPELPGIAKMFSNEMTL 182

Query: 374 ASAWIHLLAVDLFAARQVFRDGLANNIETRHSVSLCLLFCPIGIVTHVITKALTKTVGS 198
           ASAWIHLLAVDLFAARQVF DGL N +ETRHSVSLCLLFCPIGI TH ITKALTK  G+
Sbjct: 183 ASAWIHLLAVDLFAARQVFNDGLENEVETRHSVSLCLLFCPIGIATHCITKALTKGSGT 241


>ref|XP_002521222.1| conserved hypothetical protein [Ricinus communis]
           gi|223539587|gb|EEF41174.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 246

 Score =  283 bits (723), Expect = 7e-74
 Identities = 143/239 (59%), Positives = 179/239 (74%)
 Frame = -2

Query: 914 TSTFCLQSHFSLKISQSWKAMPADFTLRQEQRSISNLGGTRAEVFGQRVARLGTVVSNEW 735
           +S FC  SH  LK     + +     + ++ +   +L     E+ G++VA+LG  + ++W
Sbjct: 4   SSCFC-PSHIHLKTGYPRRVIRPGRPVEKDGQKFFSLRSNSTELSGRQVAKLGADLLSDW 62

Query: 734 SFLGGSRIILHQKVARSVPNGKASGVNASWFTSSQIANNAFTLGTVAVLPFYTFMVLAPK 555
           SF+GGSRI +  K+AR++   K SGV+ASW +S Q+A+ AFTLGT AVLPFYT MV+APK
Sbjct: 63  SFIGGSRIAIRPKLARAIVYRKHSGVHASWLSSYQLASTAFTLGTAAVLPFYTLMVVAPK 122

Query: 554 AELTKKSMESVIPYIVXXXXXXXXXXLSWAPDTLQMMFASKYWLPELPGIAKMFSHEMTM 375
           AELT+KSMES IPY+V          LSW PDT+++MFAS+YWLPELPGIAKMFS EMT+
Sbjct: 123 AELTRKSMESSIPYVVLGVLYAYLLYLSWTPDTVRLMFASQYWLPELPGIAKMFSSEMTL 182

Query: 374 ASAWIHLLAVDLFAARQVFRDGLANNIETRHSVSLCLLFCPIGIVTHVITKALTKTVGS 198
           ASAWIHLLAVDLFAARQVF DGL N IETRHSVSLCLLFCPIGIV+HV+TKALT++  S
Sbjct: 183 ASAWIHLLAVDLFAARQVFHDGLENEIETRHSVSLCLLFCPIGIVSHVLTKALTRSAAS 241


>gb|ADH82117.1| neoxanthin synthase [Citrus sinensis]
          Length = 248

 Score =  268 bits (686), Expect = 1e-69
 Identities = 132/207 (63%), Positives = 158/207 (76%)
 Frame = -2

Query: 827 EQRSISNLGGTRAEVFGQRVARLGTVVSNEWSFLGGSRIILHQKVARSVPNGKASGVNAS 648
           +QR  S      AE FG+++  +GT + +EWSFLGGSR+I+  +V + + + K   ++AS
Sbjct: 41  DQRLTSAPRSMNAETFGRQITGVGTDLQSEWSFLGGSRVIIRPQVTKFIRHQKGFHIHAS 100

Query: 647 WFTSSQIANNAFTLGTVAVLPFYTFMVLAPKAELTKKSMESVIPYIVXXXXXXXXXXLSW 468
           W +  Q+ +  FTLGT  VLPFYT MV APKAELTKKSMES IPY+V          LSW
Sbjct: 101 WLSGPQLVSTVFTLGTAGVLPFYTLMVFAPKAELTKKSMESSIPYVVLGVLYAYLLYLSW 160

Query: 467 APDTLQMMFASKYWLPELPGIAKMFSHEMTMASAWIHLLAVDLFAARQVFRDGLANNIET 288
            PDTL++MFASKYWLPELPGIAKMFS E+T+ASAWIHLLAVDLFAA  VF+DGL N IET
Sbjct: 161 TPDTLRLMFASKYWLPELPGIAKMFSSEITLASAWIHLLAVDLFAASHVFQDGLQNQIET 220

Query: 287 RHSVSLCLLFCPIGIVTHVITKALTKT 207
           RHSVSLCLLFCPIGI+THVITKALTK+
Sbjct: 221 RHSVSLCLLFCPIGILTHVITKALTKS 247


>ref|XP_002329286.1| predicted protein [Populus trichocarpa] gi|222870740|gb|EEF07871.1|
           predicted protein [Populus trichocarpa]
          Length = 242

 Score =  255 bits (651), Expect = 2e-65
 Identities = 129/215 (60%), Positives = 163/215 (75%), Gaps = 4/215 (1%)
 Frame = -2

Query: 830 QEQRSISNLGGTRAEVFGQRVARLGTVVSNEWSFLGGSRIILHQKVARSVPNGKASGVNA 651
           +  + IS+L     E+FG+RVAR+G+ +  +WSFLGGSRI++H K+   +   K+SGVNA
Sbjct: 23  ERSKVISSLRSNSTEIFGRRVARVGSDLHRDWSFLGGSRIVIHPKLTNFLVYRKSSGVNA 82

Query: 650 SWFTSSQIANNAFTLGTVAVLPFYTFMVLAPKAELTK-KSMESVIPYIVXXXXXXXXXXL 474
           SW TSSQIA++ FTLGT AVLPFYT MV+APKAE+++ +S+  V  +++           
Sbjct: 83  SWLTSSQIASSVFTLGTAAVLPFYTLMVVAPKAEVSRLESLWKVAFHMLSWDFCMHFYYT 142

Query: 473 SWA---PDTLQMMFASKYWLPELPGIAKMFSHEMTMASAWIHLLAVDLFAARQVFRDGLA 303
                 P+T+ ++FASKYWLPELPGI K+FS EMT+ASAWIHLL VDLFAARQVF DGL 
Sbjct: 143 CLGHLRPETIHLIFASKYWLPELPGIEKIFSSEMTLASAWIHLLVVDLFAARQVFDDGLE 202

Query: 302 NNIETRHSVSLCLLFCPIGIVTHVITKALTKTVGS 198
           N +ETRHSVSLCLLFCPIGIVTHVITKALTK+ G+
Sbjct: 203 NEVETRHSVSLCLLFCPIGIVTHVITKALTKSAGT 237


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