BLASTX nr result

ID: Coptis25_contig00014607 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00014607
         (380 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002328930.1| predicted protein [Populus trichocarpa] gi|2...    62   5e-08
ref|XP_002273468.1| PREDICTED: glycerophosphodiester phosphodies...    60   2e-07
ref|XP_002298651.1| predicted protein [Populus trichocarpa] gi|2...    59   3e-07
gb|AFK48833.1| unknown [Medicago truncatula]                           56   3e-06
ref|XP_002512887.1| glycerophosphodiester phosphodiesterase, put...    55   6e-06

>ref|XP_002328930.1| predicted protein [Populus trichocarpa] gi|222839360|gb|EEE77697.1|
           predicted protein [Populus trichocarpa]
          Length = 382

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 32/55 (58%), Positives = 42/55 (76%), Gaps = 4/55 (7%)
 Frame = -2

Query: 373 VKEIAEAVSDITNPIQVGEEENI----GEEMVTKRPKFSQLELSFLLKLIPELVQ 221
           V+EI EAVSD+  P ++GE E++    GE  V  +P+FSQ+ELSFLLKLIPEL+Q
Sbjct: 327 VQEITEAVSDLIKPSKMGEAESLAEGDGEMEVKSKPQFSQMELSFLLKLIPELIQ 381


>ref|XP_002273468.1| PREDICTED: glycerophosphodiester phosphodiesterase GDE1 [Vitis
           vinifera] gi|147820259|emb|CAN71478.1| hypothetical
           protein VITISV_038621 [Vitis vinifera]
          Length = 382

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 31/54 (57%), Positives = 40/54 (74%), Gaps = 4/54 (7%)
 Frame = -2

Query: 373 VKEIAEAVSDITNPIQVGEEEN----IGEEMVTKRPKFSQLELSFLLKLIPELV 224
           VKEI EAVSD+  P + G+EE+    +G+  V  +P+FSQ ELSFLLKLIPEL+
Sbjct: 327 VKEITEAVSDLMKPSKEGDEESLPEGVGQMQVKSKPQFSQRELSFLLKLIPELI 380


>ref|XP_002298651.1| predicted protein [Populus trichocarpa] gi|222845909|gb|EEE83456.1|
           predicted protein [Populus trichocarpa]
          Length = 372

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 34/56 (60%), Positives = 42/56 (75%), Gaps = 4/56 (7%)
 Frame = -2

Query: 373 VKEIAEAVSDITNPIQVGEEENIGE---EMVTK-RPKFSQLELSFLLKLIPELVQY 218
           V+EI EAVSD+  P +V E E++ E   EM  K +PKFSQ ELSFLLKLIPEL+Q+
Sbjct: 317 VQEITEAVSDLIRPSKVEEAESLAEGHDEMEEKSKPKFSQRELSFLLKLIPELIQH 372


>gb|AFK48833.1| unknown [Medicago truncatula]
          Length = 380

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 28/52 (53%), Positives = 39/52 (75%), Gaps = 1/52 (1%)
 Frame = -2

Query: 376 FVKEIAEAVSDITNPIQVGEEENIGEEM-VTKRPKFSQLELSFLLKLIPELV 224
           FV+EI EAV+D+  P ++GEEE + E +    +P+FSQ ELSFL KLIP+L+
Sbjct: 327 FVQEITEAVADMMKPAKIGEEEGLTEGIGKNSKPQFSQQELSFLYKLIPQLL 378


>ref|XP_002512887.1| glycerophosphodiester phosphodiesterase, putative [Ricinus
           communis] gi|223547898|gb|EEF49390.1|
           glycerophosphodiester phosphodiesterase, putative
           [Ricinus communis]
          Length = 383

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 34/56 (60%), Positives = 41/56 (73%), Gaps = 5/56 (8%)
 Frame = -2

Query: 373 VKEIAEAVSDITNPIQVGEEE-NIGE---EMVTKR-PKFSQLELSFLLKLIPELVQ 221
           VKEI EAVSD+  P +V +EE N+ E   EM  K  P+FSQ ELSFLLKLIP+L+Q
Sbjct: 327 VKEITEAVSDMIKPAKVDDEESNLAEKDSEMEMKSIPQFSQKELSFLLKLIPQLIQ 382


Top