BLASTX nr result

ID: Coptis25_contig00014606 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00014606
         (818 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEK06080.1| phytochrome-interacting factor 3.1 [Populus balsa...    86   1e-14
ref|XP_002276198.2| PREDICTED: transcription factor PIF3-like [V...    85   2e-14
gb|AEK06083.1| phytochrome-interacting factor 3.1 [Populus balsa...    85   2e-14
emb|CBI39676.3| unnamed protein product [Vitis vinifera]               85   2e-14
ref|XP_002330047.1| predicted protein [Populus trichocarpa] gi|2...    84   5e-14

>gb|AEK06080.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
          Length = 589

 Score = 85.9 bits (211), Expect = 1e-14
 Identities = 39/70 (55%), Positives = 46/70 (65%)
 Frame = -1

Query: 782 DITGGSHGCPLVQVPPMHATQFSYPPISGPSSLPVMTSSSLQMFGPPGHGIPTPMPRAPF 603
           D+ GG  GCP+ QVPPMH   F   P+SGPS+L  M   SLQMFG  G G+P P PRAP 
Sbjct: 422 DMNGGYSGCPMYQVPPMHGAHFPGSPMSGPSALHGMGGPSLQMFGLSGQGLPMPFPRAPL 481

Query: 602 IPLSGEPSTK 573
           +P+SG P  K
Sbjct: 482 MPMSGGPPPK 491


>ref|XP_002276198.2| PREDICTED: transcription factor PIF3-like [Vitis vinifera]
          Length = 752

 Score = 84.7 bits (208), Expect = 2e-14
 Identities = 40/74 (54%), Positives = 47/74 (63%)
 Frame = -1

Query: 785 LDITGGSHGCPLVQVPPMHATQFSYPPISGPSSLPVMTSSSLQMFGPPGHGIPTPMPRAP 606
           LD+ GGS  CP +Q PPM  T F   PIS P +L  M  S+LQ+FG PG GIP  MP AP
Sbjct: 566 LDMNGGSPSCPFIQAPPMQGTHFPGRPISVPPNLHGMVGSNLQVFGLPGQGIPLSMPHAP 625

Query: 605 FIPLSGEPSTKPAM 564
            IP+SG P  K +M
Sbjct: 626 LIPMSGSPLMKSSM 639


>gb|AEK06083.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
          Length = 589

 Score = 84.7 bits (208), Expect = 2e-14
 Identities = 39/70 (55%), Positives = 46/70 (65%)
 Frame = -1

Query: 782 DITGGSHGCPLVQVPPMHATQFSYPPISGPSSLPVMTSSSLQMFGPPGHGIPTPMPRAPF 603
           D+ GG  GCP+ QVPPMH   F   P+SGPS+L  M  SSLQMFG  G G+P   PRAP 
Sbjct: 422 DMNGGYSGCPMYQVPPMHGAHFPGSPMSGPSALHGMGGSSLQMFGLSGQGLPMSFPRAPL 481

Query: 602 IPLSGEPSTK 573
           +P+SG P  K
Sbjct: 482 MPMSGGPPPK 491


>emb|CBI39676.3| unnamed protein product [Vitis vinifera]
          Length = 573

 Score = 84.7 bits (208), Expect = 2e-14
 Identities = 40/74 (54%), Positives = 47/74 (63%)
 Frame = -1

Query: 785 LDITGGSHGCPLVQVPPMHATQFSYPPISGPSSLPVMTSSSLQMFGPPGHGIPTPMPRAP 606
           LD+ GGS  CP +Q PPM  T F   PIS P +L  M  S+LQ+FG PG GIP  MP AP
Sbjct: 430 LDMNGGSPSCPFIQAPPMQGTHFPGRPISVPPNLHGMVGSNLQVFGLPGQGIPLSMPHAP 489

Query: 605 FIPLSGEPSTKPAM 564
            IP+SG P  K +M
Sbjct: 490 LIPMSGSPLMKSSM 503


>ref|XP_002330047.1| predicted protein [Populus trichocarpa] gi|222871472|gb|EEF08603.1|
           predicted protein [Populus trichocarpa]
          Length = 733

 Score = 83.6 bits (205), Expect = 5e-14
 Identities = 40/75 (53%), Positives = 47/75 (62%)
 Frame = -1

Query: 782 DITGGSHGCPLVQVPPMHATQFSYPPISGPSSLPVMTSSSLQMFGPPGHGIPTPMPRAPF 603
           D+ GGS GCP+ QVPPMH   FS  P+SG S+L  M  S+LQMFG  G G P   P AP 
Sbjct: 564 DVNGGSSGCPMYQVPPMHGPHFSGQPMSGLSALHRMGGSNLQMFGLSGQGFPMSFPCAPL 623

Query: 602 IPLSGEPSTKPAMLP 558
           +P+SG P  K  M P
Sbjct: 624 VPMSGGPPLKTNMEP 638


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