BLASTX nr result

ID: Coptis25_contig00014601 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00014601
         (824 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002516170.1| hypothetical protein RCOM_0708150 [Ricinus c...   125   9e-27
emb|CBI20749.3| unnamed protein product [Vitis vinifera]              125   1e-26
ref|XP_002308507.1| predicted protein [Populus trichocarpa] gi|2...   101   2e-19
ref|XP_003526088.1| PREDICTED: uncharacterized protein LOC100819...    99   1e-18
ref|XP_003523660.1| PREDICTED: uncharacterized protein LOC100808...    98   2e-18

>ref|XP_002516170.1| hypothetical protein RCOM_0708150 [Ricinus communis]
           gi|223544656|gb|EEF46172.1| hypothetical protein
           RCOM_0708150 [Ricinus communis]
          Length = 425

 Score =  125 bits (315), Expect = 9e-27
 Identities = 75/210 (35%), Positives = 103/210 (49%), Gaps = 9/210 (4%)
 Frame = -3

Query: 603 WGASSIEPIPFAENFXXXXXXXXXXXXLSFNDFN-LDTTLYHYNNENPXXXXXXXXXXXX 427
           W    + P    EN             L+F DFN LDT+LYH N+ NP            
Sbjct: 217 WPTPPVLPSTINENLNFPLPNQTLGLNLNFQDFNDLDTSLYH-NSNNPSSVYSSSSPSSF 275

Query: 426 XXXXXSPEEEAHSIMVVPEEPQHHIMA--------NGGGVHTAFGSYDMADIQSSGEQHQ 271
                S       +  V +  +    A         GGG+H      +MA+++S GEQHQ
Sbjct: 276 SSPSPSFSIATEDVPSVAKSQEGMPPAICDLTESYGGGGLHQVVDDEEMAEMRSIGEQHQ 335

Query: 270 MEYNDTMNIVDSAWWVEFDSTMXXXXXXXXXXXEFHIFDEVMEFPAWMNDDENCLLDEHL 91
           ME+NDTMN+V SAWW +F  TM            +  FDEVMEFP+W+N ++ C L +H 
Sbjct: 336 MEWNDTMNLVTSAWWFKFLKTMDSGHEVKTEDDGYQPFDEVMEFPSWLNANDAC-LQQHF 394

Query: 90  ENNCLDDDLQEPALPCMGIEEIDGMGGDWL 1
           ++   +D   +P+L CM I EI+GMGG+WL
Sbjct: 395 DDYSTEDYYHDPSLRCMDIGEIEGMGGEWL 424


>emb|CBI20749.3| unnamed protein product [Vitis vinifera]
          Length = 290

 Score =  125 bits (314), Expect = 1e-26
 Identities = 73/200 (36%), Positives = 99/200 (49%), Gaps = 6/200 (3%)
 Frame = -3

Query: 582 PIPFAENFXXXXXXXXXXXXLSFNDFN-LDTTLYHYNNENPXXXXXXXXXXXXXXXXXSP 406
           P P ++N             L+F+DFN LD +LYH  N                      
Sbjct: 91  PPPLSDNINFALPNQTLGLNLNFHDFNNLDASLYHTTNNPSSIYSSSSPSSSSSPTLSIA 150

Query: 405 EEEAHSIMVVPEEPQ----HHIMANGGGVHTAFGSYDMADIQSSGEQHQMEYNDTMNIVD 238
            EE        E P        +  GGG H A    +MA+I+  GEQHQME+ND +N+  
Sbjct: 151 TEEVRCFATSQEGPPVVAADSSVMTGGGFHPAMDDEEMAEIRWIGEQHQMEWNDNLNLAT 210

Query: 237 SAWWVEFDSTM-XXXXXXXXXXXEFHIFDEVMEFPAWMNDDENCLLDEHLENNCLDDDLQ 61
           SAWW +F   M             +H FDEVM++PAW++ +E+CL+   L++ C  D LQ
Sbjct: 211 SAWWFKFLKAMEIGPEATNVEDDGYHPFDEVMDYPAWLSGNESCLV-PRLDDCCSMDYLQ 269

Query: 60  EPALPCMGIEEIDGMGGDWL 1
           +PALPCM I EI+GM G+WL
Sbjct: 270 DPALPCMDIGEIEGMDGEWL 289


>ref|XP_002308507.1| predicted protein [Populus trichocarpa] gi|222854483|gb|EEE92030.1|
           predicted protein [Populus trichocarpa]
          Length = 320

 Score =  101 bits (252), Expect = 2e-19
 Identities = 70/203 (34%), Positives = 94/203 (46%), Gaps = 2/203 (0%)
 Frame = -3

Query: 603 WGASSIEPIPFAENFXXXXXXXXXXXXLSFNDFN-LDTTLYHYNNENPXXXXXXXXXXXX 427
           W +SSI     AEN             L+F+DFN +DTTLY+ ++  P            
Sbjct: 136 WPSSSILDPTTAENINFPLPNQTLGLNLNFHDFNNIDTTLYYSSDNPPSVYSSSSPSSSS 195

Query: 426 XXXXXSPEEEAHSIMVVPEEPQHHIMANGGGVHTAFGSYDMADIQSSGEQHQMEYNDTMN 247
                   EE  S+    E          G    AF   D     S GEQHQME+NDTMN
Sbjct: 196 FPSPFIATEEIPSVSNTCE----------GMPPAAFDETD-----SYGEQHQMEWNDTMN 240

Query: 246 IVDSAWWVEF-DSTMXXXXXXXXXXXEFHIFDEVMEFPAWMNDDENCLLDEHLENNCLDD 70
           +V SAWW +F  +T              H F++VMEFPAW+N ++     +H  ++   D
Sbjct: 241 LVTSAWWFKFMKTTGLDPEVKSTEDDGCHPFEQVMEFPAWLNAND----QQHFNDHFSQD 296

Query: 69  DLQEPALPCMGIEEIDGMGGDWL 1
              + ALPCM I EI+G+ G+WL
Sbjct: 297 YFHDAALPCMDIGEIEGIDGEWL 319


>ref|XP_003526088.1| PREDICTED: uncharacterized protein LOC100819869 [Glycine max]
          Length = 388

 Score = 99.0 bits (245), Expect = 1e-18
 Identities = 50/114 (43%), Positives = 69/114 (60%), Gaps = 1/114 (0%)
 Frame = -3

Query: 339 GGVHTAFGSYDMADIQSSGEQHQMEYNDTMNIVDSAWWVEFDSTM-XXXXXXXXXXXEFH 163
           GG+HTA     MA+++S GEQ+QME+NDTMN+V SA W ++   M             ++
Sbjct: 280 GGLHTAMDDEGMAEMRSLGEQYQMEWNDTMNLVKSACWFKYLKNMEHRAHEANTVDVAYN 339

Query: 162 IFDEVMEFPAWMNDDENCLLDEHLENNCLDDDLQEPALPCMGIEEIDGMGGDWL 1
            FD+++EFPAW+N +E+CL        C  D  QE +LPCM I +ID M  DWL
Sbjct: 340 NFDQLLEFPAWLNANESCL------EQCSVDYFQESSLPCMDIGDIDSMDDDWL 387


>ref|XP_003523660.1| PREDICTED: uncharacterized protein LOC100808969 [Glycine max]
          Length = 396

 Score = 98.2 bits (243), Expect = 2e-18
 Identities = 72/206 (34%), Positives = 97/206 (47%), Gaps = 7/206 (3%)
 Frame = -3

Query: 597 ASSIEPIPF-AENFXXXXXXXXXXXXLSFNDFN-LDTTLYHYNNEN----PXXXXXXXXX 436
           AS I P P  AEN             L+  DFN LD TL H NN +    P         
Sbjct: 198 ASQITPPPLMAENPNFVLPNQTLGLNLNLQDFNNLDATL-HLNNSSSSSSPYSSATSSSA 256

Query: 435 XXXXXXXXSPEEEAHSIMVVPEEPQHHIMANGGGVHTAFGSYDMADIQSSGEQHQMEYND 256
                     + E  S +V   E        GG +HTA     MA+I+S GEQ+QME+ND
Sbjct: 257 PLELPSVGISQGEGLSSLVDTIESNAATQVTGG-LHTAMDDEGMAEIRSLGEQYQMEWND 315

Query: 255 TMNIVDSAWWVEFDSTM-XXXXXXXXXXXEFHIFDEVMEFPAWMNDDENCLLDEHLENNC 79
           TMN+V SA W ++   M             ++ FD+++EFPAW+N +++CL        C
Sbjct: 316 TMNLVKSACWFKYLKNMEHRAPEANTVDVAYNNFDQLLEFPAWLNANDSCL------EQC 369

Query: 78  LDDDLQEPALPCMGIEEIDGMGGDWL 1
             D  QE +LPC+ I +I+ M  DWL
Sbjct: 370 SVDYFQESSLPCLDIGDIESMDDDWL 395


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