BLASTX nr result

ID: Coptis25_contig00014590 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00014590
         (360 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274489.2| PREDICTED: LOW QUALITY PROTEIN: midasin-like...   130   8e-29
emb|CBI35900.3| unnamed protein product [Vitis vinifera]              130   8e-29
ref|XP_002521362.1| ATP binding protein, putative [Ricinus commu...   119   3e-25
ref|XP_002327931.1| predicted protein [Populus trichocarpa] gi|2...   110   1e-22
ref|XP_003627214.1| Midasin [Medicago truncatula] gi|355521236|g...    93   2e-17

>ref|XP_002274489.2| PREDICTED: LOW QUALITY PROTEIN: midasin-like [Vitis vinifera]
          Length = 5286

 Score =  130 bits (328), Expect = 8e-29
 Identities = 68/119 (57%), Positives = 80/119 (67%), Gaps = 1/119 (0%)
 Frame = +3

Query: 6    SEKPSDEQDTSNEAPSKNDKGIEMDQDFAADILXXXXXXXXXXXXXXXXXXXXXAMGSTG 185
            SEKPS+EQD S+E PSKNDKGIEM+QDFAAD                       AMG TG
Sbjct: 4467 SEKPSEEQDVSDEVPSKNDKGIEMEQDFAADTFSVSEESGDDDNEDSGDEQLDSAMGETG 4526

Query: 186  ENNEVVDEKLWNKDDEGNPDTTTERYEEGPSVRDKDSSSRELRAKEDDANSLG-ESGEL 359
             ++E+VDEKLWNKD + N + T E+YE GPSV DKD+SSRELRAKEDDA +   E G+L
Sbjct: 4527 ADSEIVDEKLWNKDADENANNTKEKYESGPSVTDKDASSRELRAKEDDAAAAADEPGQL 4585


>emb|CBI35900.3| unnamed protein product [Vitis vinifera]
          Length = 5267

 Score =  130 bits (328), Expect = 8e-29
 Identities = 68/119 (57%), Positives = 80/119 (67%), Gaps = 1/119 (0%)
 Frame = +3

Query: 6    SEKPSDEQDTSNEAPSKNDKGIEMDQDFAADILXXXXXXXXXXXXXXXXXXXXXAMGSTG 185
            SEKPS+EQD S+E PSKNDKGIEM+QDFAAD                       AMG TG
Sbjct: 4468 SEKPSEEQDVSDEVPSKNDKGIEMEQDFAADTFSVSEESGDDDNEDSGDEQLDSAMGETG 4527

Query: 186  ENNEVVDEKLWNKDDEGNPDTTTERYEEGPSVRDKDSSSRELRAKEDDANSLG-ESGEL 359
             ++E+VDEKLWNKD + N + T E+YE GPSV DKD+SSRELRAKEDDA +   E G+L
Sbjct: 4528 ADSEIVDEKLWNKDADENANNTKEKYESGPSVTDKDASSRELRAKEDDAAAAADEPGQL 4586


>ref|XP_002521362.1| ATP binding protein, putative [Ricinus communis]
            gi|223539440|gb|EEF41030.1| ATP binding protein, putative
            [Ricinus communis]
          Length = 5282

 Score =  119 bits (297), Expect = 3e-25
 Identities = 59/118 (50%), Positives = 77/118 (65%)
 Frame = +3

Query: 6    SEKPSDEQDTSNEAPSKNDKGIEMDQDFAADILXXXXXXXXXXXXXXXXXXXXXAMGSTG 185
            S+KPS+EQD S +AP+KNDKGIEM+QDF AD                       AMG TG
Sbjct: 4444 SDKPSEEQDASGDAPNKNDKGIEMEQDFTADTFSVSEDSDEENDEDSDDGQLESAMGETG 4503

Query: 186  ENNEVVDEKLWNKDDEGNPDTTTERYEEGPSVRDKDSSSRELRAKEDDANSLGESGEL 359
             + E +DEKLW+K+++ NP+   E+YE GPSV +KD+SSRELRAKE ++ +  E GEL
Sbjct: 4504 PDGEAIDEKLWDKEEDENPNNRNEKYESGPSVIEKDASSRELRAKE-ESGAADEQGEL 4560


>ref|XP_002327931.1| predicted protein [Populus trichocarpa] gi|222837340|gb|EEE75719.1|
            predicted protein [Populus trichocarpa]
          Length = 5317

 Score =  110 bits (275), Expect = 1e-22
 Identities = 59/109 (54%), Positives = 68/109 (62%)
 Frame = +3

Query: 6    SEKPSDEQDTSNEAPSKNDKGIEMDQDFAADILXXXXXXXXXXXXXXXXXXXXXAMGSTG 185
            SEK  DEQD S E P+KN+KGIEM+ D  AD                       AMG  G
Sbjct: 4494 SEKACDEQDASGEVPNKNEKGIEME-DLTADTFSVSDDSGEDNEEDGEDEQLDSAMGEAG 4552

Query: 186  ENNEVVDEKLWNKDDEGNPDTTTERYEEGPSVRDKDSSSRELRAKEDDA 332
             ++EVVDEKL NKD++ NP+ T ERYE GPSVRD D+SSRELRAKED A
Sbjct: 4553 LDSEVVDEKLQNKDEDDNPNNTNERYESGPSVRDNDTSSRELRAKEDSA 4601


>ref|XP_003627214.1| Midasin [Medicago truncatula] gi|355521236|gb|AET01690.1| Midasin
            [Medicago truncatula]
          Length = 5078

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 46/116 (39%), Positives = 68/116 (58%)
 Frame = +3

Query: 9    EKPSDEQDTSNEAPSKNDKGIEMDQDFAADILXXXXXXXXXXXXXXXXXXXXXAMGSTGE 188
            E+  +EQ+ S E P  ++ GIEMDQDF AD +                      MG TG 
Sbjct: 4231 EQKKEEQEESKEVPGNDNTGIEMDQDFQADAVSLSEDSSENEDCDGENEELESEMGPTGP 4290

Query: 189  NNEVVDEKLWNKDDEGNPDTTTERYEEGPSVRDKDSSSRELRAKEDDANSLGESGE 356
            ++E V EK+W+++++  PD T E+YE GPSV+D D S++ELRAK+D  +   +SG+
Sbjct: 4291 DSEAVGEKIWDQNEDETPDDTGEKYESGPSVKDGDGSNKELRAKDDSTSD--QSGD 4344


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