BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00014586
         (1014 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635004.1| PREDICTED: putative F-box/LRR-repeat protein...   129   9e-28
emb|CAN78503.1| hypothetical protein VITISV_023071 [Vitis vinifera]   129   9e-28
ref|XP_002516561.1| ubiquitin-protein ligase, putative [Ricinus ...   127   4e-27
ref|XP_002300142.1| f-box family protein [Populus trichocarpa] g...   122   2e-25
emb|CBI23315.3| unnamed protein product [Vitis vinifera]              112   1e-22

>ref|XP_003635004.1| PREDICTED: putative F-box/LRR-repeat protein At5g02930-like [Vitis
           vinifera]
          Length = 610

 Score =  129 bits (325), Expect = 9e-28
 Identities = 89/247 (36%), Positives = 126/247 (51%)
 Frame = +2

Query: 164 GNDTELQKSWELSQDDIKDQDRISSLPDDIMFHVLSLLEMKDVVKTGVLSRRWGHLWTNV 343
           G+D E     E+S      +D IS L D I+  +LS L MK VV T +LS+RW  LWT V
Sbjct: 58  GDDDEDDGDEEISSR----KDGISELSDSILIRILSFLPMKYVVATSILSKRWQFLWTMV 113

Query: 344 RTLDFRGPTSCEEEAREKFVSFVDYTLLFNESKTIKTFHLLLGLTEAFPEDISEEEAKRV 523
             L FR          E FV+ +D TL+ +++  IK F +       F   ++       
Sbjct: 114 PNLVFRF-----RRRDEHFVNSIDKTLVLHQNSQIKKFLIDFTYQSQFQSSVNV------ 162

Query: 524 KELCLHIDRWVRLAVRKKVEIVYLDFFTVNTRWRGCLLSLYPYNLPCSLYINNTIKSLLL 703
                    W+R A RK VE ++L F  V    R   +  Y + LP  LY N++I  L L
Sbjct: 163 ---------WIRHATRKNVEELHLQF-RVGQHIRSSPMD-YAHALPQFLYANSSIVKLSL 211

Query: 704 ASCSIDPTRQLQWKYLKVLRLFDVKLCEELVETILNGSPLLESLHLLRCNGLRKLSIKSP 883
             C+I PT  + W  LK L +  V+LC++L+E IL+G P LESL L  C G+  L+I S 
Sbjct: 212 WFCNIKPTWVISWPSLKTLSIGSVELCDDLIEEILSGCPALESLELHHCFGINSLNITSA 271

Query: 884 NLEYLLL 904
           +L+ L++
Sbjct: 272 SLKKLVI 278


>emb|CAN78503.1| hypothetical protein VITISV_023071 [Vitis vinifera]
          Length = 891

 Score =  129 bits (325), Expect = 9e-28
 Identities = 89/247 (36%), Positives = 126/247 (51%)
 Frame = +2

Query: 164 GNDTELQKSWELSQDDIKDQDRISSLPDDIMFHVLSLLEMKDVVKTGVLSRRWGHLWTNV 343
           G+D E     E+S      +D IS L D I+  +LS L MK VV T +LS+RW  LWT V
Sbjct: 58  GDDDEDDGDEEISSR----KDGISELSDSILIRILSFLPMKYVVATSILSKRWQFLWTMV 113

Query: 344 RTLDFRGPTSCEEEAREKFVSFVDYTLLFNESKTIKTFHLLLGLTEAFPEDISEEEAKRV 523
             L FR          E FV+ +D TL+ +++  IK F +       F   ++       
Sbjct: 114 PNLVFRF-----RRRDEHFVNSIDKTLVLHQNSQIKKFLIDFTYQSQFQSSVNV------ 162

Query: 524 KELCLHIDRWVRLAVRKKVEIVYLDFFTVNTRWRGCLLSLYPYNLPCSLYINNTIKSLLL 703
                    W+R A RK VE ++L F  V    R   +  Y + LP  LY N++I  L L
Sbjct: 163 ---------WIRHATRKNVEELHLQF-RVGQHIRSSPMD-YAHALPQFLYANSSIVKLSL 211

Query: 704 ASCSIDPTRQLQWKYLKVLRLFDVKLCEELVETILNGSPLLESLHLLRCNGLRKLSIKSP 883
             C+I PT  + W  LK L +  V+LC++L+E IL+G P LESL L  C G+  L+I S 
Sbjct: 212 WFCNIKPTWVISWPSLKTLSIGSVELCDDLIEEILSGCPALESLELHHCFGINSLNITSA 271

Query: 884 NLEYLLL 904
           +L+ L++
Sbjct: 272 SLKKLVI 278


>ref|XP_002516561.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223544381|gb|EEF45902.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 348

 Score =  127 bits (319), Expect = 4e-27
 Identities = 84/256 (32%), Positives = 131/256 (51%), Gaps = 7/256 (2%)
 Frame = +2

Query: 218 DQDRISSLPDDIMFHVLS-LLEMKDVVKTGVLSRRWGHLWTNVRTLDFRGPTSCEEEARE 394
           ++D ISSLPD ++ H+LS LL  ++ VKTG+LS+RW   WT V+ L+F  P    +E  +
Sbjct: 19  EEDGISSLPDTLIHHILSFLLSTEEAVKTGILSKRWRDQWTYVQNLNFNYPYCFSDEKLK 78

Query: 395 KFVSFVDYTLLFNESKTIKTFHLLLGLTEAFPEDISEEEAKRVKELCLHIDRWVRLAVRK 574
            F  F+  TL+ N    I  F +   L+            K + E    I   +R A++K
Sbjct: 79  CFSKFIHNTLVLNSCSKINKFSISPRLSSD----------KYMSEYQSQISLCMRFAIKK 128

Query: 575 KVEIVYLDFFTVNTRWRGCLLSLYPYNLPCSLYINNTIKSLLLASCSIDPTRQLQWKYLK 754
           + +++ LDF   N  +R          LP   Y N+++  + L+SC       + W+ LK
Sbjct: 129 EAKVLTLDFHPSNQGYR----------LPQFFYSNDSVTEMTLSSCGFSLNADVNWRSLK 178

Query: 755 VLRLFDVKLCEELVETILNGSPLLESLHLLRCNGLRKLSIKSPNLEYLLLFFSVEGLR-- 928
           VL +    L   +++ IL+GSP LES  L  C G+ +L I S  L+ L+L    +G++  
Sbjct: 179 VLCIQFAYLTNRVIKDILSGSPQLESFELHNCQGIGQLDIASKCLKRLVL----DGIKWA 234

Query: 929 ----LDIQAPYLKVLE 964
               L+I  PYL+ LE
Sbjct: 235 PLDVLEISGPYLEKLE 250


>ref|XP_002300142.1| f-box family protein [Populus trichocarpa]
            gi|222847400|gb|EEE84947.1| f-box family protein [Populus
            trichocarpa]
          Length = 481

 Score =  122 bits (305), Expect = 2e-25
 Identities = 98/274 (35%), Positives = 133/274 (48%), Gaps = 11/274 (4%)
 Frame = +2

Query: 224  DRISSLPDDIMFHVLSLLEMKDVVKTGVLSRRWGHLWTNVRTLDFRGPTSCEEEAREKFV 403
            DRIS+LPD I+ H+LS L   D +KT +LS+RW  +WT V  L FR   SC +EA E F 
Sbjct: 45   DRISNLPDPIIQHILSFLPADDAIKTCILSKRWDSIWTLVPNLIFRRECSCSQEA-ENFA 103

Query: 404  SFVDYTLLFNESKTIKTFHLLLGLTEAFPEDISEEEAKRVKELCLHIDRWVRLAVRKKVE 583
             FVD  L+   S  +K F +    TE F                  +D WV  AVR KVE
Sbjct: 104  VFVDKALMHYCSPKVKKFLVEFEFTECFK---------------AQVDSWVDFAVRLKVE 148

Query: 584  IVYLDFFTVNTRWRGCLLSLYPYNLPCSLYINNTIKSLLLASCSIDPT--RQLQWKYLKV 757
             + L+F       R        Y LP  LY N   + L L  C++ P   +Q+ W  LKV
Sbjct: 149  ELCLEFH------REIADDPDYYYLPNFLYSNIPAEKLSLRFCALSPNKLKQVSWMSLKV 202

Query: 758  LRLFDVKLCEELVETILNGSPLLESLHLLRCNGLRKLSIK-SPNLEYLLLFFS------V 916
            L +    L  E+++ I  G  LLE L L +C G  +++   S +L+ L++  S       
Sbjct: 203  LSISYSWLSNEMIKNIFLGCSLLEYLKLNQCCGFDQINTNFSSSLKDLVVDGSWGPEDKF 262

Query: 917  EGLRLDIQAPYLKVLECMGEI--ANYRLIDVSSL 1012
                + I+ P L  L   G +  ANY L+DVSSL
Sbjct: 263  GDFVITIKGPNLLSLTLAGYMHRANYMLLDVSSL 296


>emb|CBI23315.3| unnamed protein product [Vitis vinifera]
          Length = 340

 Score =  112 bits (281), Expect = 1e-22
 Identities = 75/208 (36%), Positives = 107/208 (51%)
 Frame = +2

Query: 281 MKDVVKTGVLSRRWGHLWTNVRTLDFRGPTSCEEEAREKFVSFVDYTLLFNESKTIKTFH 460
           MK VV T +LS+RW  LWT V  L FR          E FV+ +D TL+ +++  IK F 
Sbjct: 1   MKYVVATSILSKRWQFLWTMVPNLVFRF-----RRRDEHFVNSIDKTLVLHQNSQIKKFL 55

Query: 461 LLLGLTEAFPEDISEEEAKRVKELCLHIDRWVRLAVRKKVEIVYLDFFTVNTRWRGCLLS 640
           +       F   ++                W+R A RK VE ++L F  V    R   + 
Sbjct: 56  IDFTYQSQFQSSVNV---------------WIRHATRKNVEELHLQF-RVGQHIRSSPMD 99

Query: 641 LYPYNLPCSLYINNTIKSLLLASCSIDPTRQLQWKYLKVLRLFDVKLCEELVETILNGSP 820
            Y + LP  LY N++I  L L  C+I PT  + W  LK L +  V+LC++L+E IL+G P
Sbjct: 100 -YAHALPQFLYANSSIVKLSLWFCNIKPTWVISWPSLKTLSIGSVELCDDLIEEILSGCP 158

Query: 821 LLESLHLLRCNGLRKLSIKSPNLEYLLL 904
            LESL L  C G+  L+I S +L+ L++
Sbjct: 159 ALESLELHHCFGINSLNITSASLKKLVI 186