BLASTX nr result

ID: Coptis25_contig00014580 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00014580
         (478 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284145.1| PREDICTED: transcription factor bHLH68 [Viti...   165   3e-39
emb|CAN77172.1| hypothetical protein VITISV_041271 [Vitis vinifera]   163   1e-38
ref|XP_003530508.1| PREDICTED: transcription factor bHLH68-like ...   139   2e-31
ref|XP_003530507.1| PREDICTED: transcription factor bHLH68-like ...   139   2e-31
ref|XP_003530506.1| PREDICTED: transcription factor bHLH68-like ...   139   2e-31

>ref|XP_002284145.1| PREDICTED: transcription factor bHLH68 [Vitis vinifera]
           gi|297738793|emb|CBI28038.3| unnamed protein product
           [Vitis vinifera]
          Length = 342

 Score =  165 bits (418), Expect = 3e-39
 Identities = 87/157 (55%), Positives = 106/157 (67%)
 Frame = -1

Query: 472 VLQSLPVQQMMAGNPNWWNINNMRPPTHEQPNXXXXXXXXXXXXXXXXXXXXXXXXXXXX 293
           VLQS PVQQMMAGNPNWWNIN+MRPP  + P                             
Sbjct: 5   VLQSSPVQQMMAGNPNWWNINSMRPPPQQPP-------PFLPSPSNLFPQYTPTSSLPMS 57

Query: 292 XTWNDNQDLPESWSQLLMGGLVGEQDRSGVSHFQNKKLENWEDQVLYSSSSTVPVVDVKQ 113
            +W+DNQ+LPESWSQLL+GGLVGE+++SG+SHFQ KKLENWEDQVL+ +++  PVVD+KQ
Sbjct: 58  ASWHDNQELPESWSQLLLGGLVGEEEKSGMSHFQAKKLENWEDQVLHQATNP-PVVDIKQ 116

Query: 112 EISEGAYAAAYNHGNHEELQGTRPTNWSHVMAASSPK 2
           E S  +Y   Y HGN E+ Q T+PT WS +M ASSPK
Sbjct: 117 ENSASSY--MYGHGN-EDFQATKPT-WSQIMPASSPK 149


>emb|CAN77172.1| hypothetical protein VITISV_041271 [Vitis vinifera]
          Length = 342

 Score =  163 bits (413), Expect = 1e-38
 Identities = 86/157 (54%), Positives = 105/157 (66%)
 Frame = -1

Query: 472 VLQSLPVQQMMAGNPNWWNINNMRPPTHEQPNXXXXXXXXXXXXXXXXXXXXXXXXXXXX 293
           VLQS PVQQMMAGNPNWWNIN+MRPP  + P                             
Sbjct: 5   VLQSSPVQQMMAGNPNWWNINSMRPPPQQPP-------PFLPSPSNLFPQYTPTSSLPMS 57

Query: 292 XTWNDNQDLPESWSQLLMGGLVGEQDRSGVSHFQNKKLENWEDQVLYSSSSTVPVVDVKQ 113
            +W+DNQ+LPESWSQLL+GGL GE+++SG+SHFQ KKLENWEDQVL+ +++  PVVD+KQ
Sbjct: 58  ASWHDNQELPESWSQLLLGGLXGEEEKSGMSHFQAKKLENWEDQVLHQATNP-PVVDIKQ 116

Query: 112 EISEGAYAAAYNHGNHEELQGTRPTNWSHVMAASSPK 2
           E S  +Y   Y HGN E+ Q T+PT WS +M ASSPK
Sbjct: 117 ENSASSY--MYGHGN-EDFQATKPT-WSQIMPASSPK 149


>ref|XP_003530508.1| PREDICTED: transcription factor bHLH68-like isoform 3 [Glycine max]
          Length = 332

 Score =  139 bits (350), Expect = 2e-31
 Identities = 76/159 (47%), Positives = 94/159 (59%), Gaps = 2/159 (1%)
 Frame = -1

Query: 472 VLQSLPVQQMMAGNPN-WWNINNMRPPTHEQPNXXXXXXXXXXXXXXXXXXXXXXXXXXX 296
           VLQS PVQQMMA NPN WWNIN MRPP   Q +                           
Sbjct: 5   VLQSSPVQQMMARNPNNWWNINTMRPPPPSQASAPFFSTPSNFLTPYNPTSLPLPS---- 60

Query: 295 XXTWNDN-QDLPESWSQLLMGGLVGEQDRSGVSHFQNKKLENWEDQVLYSSSSTVPVVDV 119
              W+DN Q+LPESWSQLLM G+V E+++ G+   Q+KKLENWE Q+L S + + P+VDV
Sbjct: 61  ---WHDNNQELPESWSQLLMSGMVSEEEKGGMCQIQSKKLENWEQQML-SQAPSAPIVDV 116

Query: 118 KQEISEGAYAAAYNHGNHEELQGTRPTNWSHVMAASSPK 2
           KQE S  +Y   Y HG +EE Q  +P  WS ++ ASSPK
Sbjct: 117 KQESSVNSY--VYGHGTNEEFQAAKPITWSQIVPASSPK 153


>ref|XP_003530507.1| PREDICTED: transcription factor bHLH68-like isoform 2 [Glycine max]
          Length = 374

 Score =  139 bits (350), Expect = 2e-31
 Identities = 76/159 (47%), Positives = 94/159 (59%), Gaps = 2/159 (1%)
 Frame = -1

Query: 472 VLQSLPVQQMMAGNPN-WWNINNMRPPTHEQPNXXXXXXXXXXXXXXXXXXXXXXXXXXX 296
           VLQS PVQQMMA NPN WWNIN MRPP   Q +                           
Sbjct: 5   VLQSSPVQQMMARNPNNWWNINTMRPPPPSQASAPFFSTPSNFLTPYNPTSLPLPS---- 60

Query: 295 XXTWNDN-QDLPESWSQLLMGGLVGEQDRSGVSHFQNKKLENWEDQVLYSSSSTVPVVDV 119
              W+DN Q+LPESWSQLLM G+V E+++ G+   Q+KKLENWE Q+L S + + P+VDV
Sbjct: 61  ---WHDNNQELPESWSQLLMSGMVSEEEKGGMCQIQSKKLENWEQQML-SQAPSAPIVDV 116

Query: 118 KQEISEGAYAAAYNHGNHEELQGTRPTNWSHVMAASSPK 2
           KQE S  +Y   Y HG +EE Q  +P  WS ++ ASSPK
Sbjct: 117 KQESSVNSY--VYGHGTNEEFQAAKPITWSQIVPASSPK 153


>ref|XP_003530506.1| PREDICTED: transcription factor bHLH68-like isoform 1 [Glycine max]
          Length = 347

 Score =  139 bits (350), Expect = 2e-31
 Identities = 76/159 (47%), Positives = 94/159 (59%), Gaps = 2/159 (1%)
 Frame = -1

Query: 472 VLQSLPVQQMMAGNPN-WWNINNMRPPTHEQPNXXXXXXXXXXXXXXXXXXXXXXXXXXX 296
           VLQS PVQQMMA NPN WWNIN MRPP   Q +                           
Sbjct: 5   VLQSSPVQQMMARNPNNWWNINTMRPPPPSQASAPFFSTPSNFLTPYNPTSLPLPS---- 60

Query: 295 XXTWNDN-QDLPESWSQLLMGGLVGEQDRSGVSHFQNKKLENWEDQVLYSSSSTVPVVDV 119
              W+DN Q+LPESWSQLLM G+V E+++ G+   Q+KKLENWE Q+L S + + P+VDV
Sbjct: 61  ---WHDNNQELPESWSQLLMSGMVSEEEKGGMCQIQSKKLENWEQQML-SQAPSAPIVDV 116

Query: 118 KQEISEGAYAAAYNHGNHEELQGTRPTNWSHVMAASSPK 2
           KQE S  +Y   Y HG +EE Q  +P  WS ++ ASSPK
Sbjct: 117 KQESSVNSY--VYGHGTNEEFQAAKPITWSQIVPASSPK 153


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