BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00014576
         (989 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EAY90961.1| hypothetical protein OsI_12575 [Oryza sativa Indi...    99   2e-34
ref|NP_001050640.2| Os03g0607600 [Oryza sativa Japonica Group] g...    96   2e-33
sp|Q75I54.1|CCA31_ORYSJ RecName: Full=Cyclin-A3-1; AltName: Full...    96   2e-33
ref|XP_002285074.2| PREDICTED: putative cyclin-A3-1-like isoform...    92   3e-32
ref|XP_003562292.1| PREDICTED: cyclin-A3-1-like [Brachypodium di...    97   4e-32

>gb|EAY90961.1| hypothetical protein OsI_12575 [Oryza sativa Indica Group]
          Length = 373

 Score = 99.4 bits (246), Expect(2) = 2e-34
 Identities = 55/147 (37%), Positives = 81/147 (55%)
 Frame = +2

Query: 524 YDIWTPTVMTFLGSFSRAAQVQCKSLSSSFIFCCYYFAELSLLEYEMLRFVPSKVAAPIV 703
           +++  PT  TFL  F R++Q   K  S    F C Y AELSLLEY  +R +PS VAA +V
Sbjct: 232 FEMGNPTTKTFLRMFIRSSQEDDKYPSLPLEFMCSYLAELSLLEYGCVRLLPSVVAASVV 291

Query: 704 FLASVTFQPEKHPWNQDLEAVSNYKSSQXXXXXXXXXXXXXXRKTCSLDEDKEEILGSAI 883
           F+A +T  P+ +PW++ L+ V+ Y++S+              RK  SL          AI
Sbjct: 292 FVARLTLDPDTNPWSKKLQEVTGYRASELKDCITCIHDLQLNRKGSSL---------MAI 342

Query: 884 RANFSQEKFEAVSEVVPLVDIPVQYFQ 964
           R  + Q +F+ VS ++P V+IP  YF+
Sbjct: 343 RDKYKQHRFKGVSTLLPPVEIPASYFE 369



 Score = 73.9 bits (180), Expect(2) = 2e-34
 Identities = 38/103 (36%), Positives = 63/103 (61%)
 Frame = +3

Query: 174 DDSGLADALMCPPYTYDILSFYRSVESKREFLPLHDYVARVQKHITAEKRALVVNKVARL 353
           D+ G  D  +C PY  DI S+ RS+E + +  P  DY+  VQ  +TA  RA++V+ +  +
Sbjct: 90  DEEGEGDPQLCAPYASDINSYLRSMEVQPKRRPAADYIETVQVDVTANMRAILVDWLVEV 149

Query: 354 TENLGYNTLCLCLSVGYLDRYLSSKEVHDGDLQIVAVASLLIA 482
            E     +  L L+V Y+DR+LS+K ++   LQ++ V+++LIA
Sbjct: 150 AEEYKLVSDTLYLTVSYIDRFLSAKAINRQKLQLLGVSAMLIA 192


>ref|NP_001050640.2| Os03g0607600 [Oryza sativa Japonica Group]
           gi|255674696|dbj|BAF12554.2| Os03g0607600 [Oryza sativa
           Japonica Group]
          Length = 395

 Score = 96.3 bits (238), Expect(2) = 2e-33
 Identities = 54/147 (36%), Positives = 80/147 (54%)
 Frame = +2

Query: 524 YDIWTPTVMTFLGSFSRAAQVQCKSLSSSFIFCCYYFAELSLLEYEMLRFVPSKVAAPIV 703
           +++  PT  TFL  F R++Q   K  S    F C Y AELSLLEY  +R +PS VAA +V
Sbjct: 232 FEMGNPTTKTFLRMFIRSSQEDDKYPSLPLEFMCSYLAELSLLEYGCVRLLPSVVAASVV 291

Query: 704 FLASVTFQPEKHPWNQDLEAVSNYKSSQXXXXXXXXXXXXXXRKTCSLDEDKEEILGSAI 883
           F+A +T   + +PW++ L+ V+ Y++S+              RK  SL          AI
Sbjct: 292 FVARLTLDSDTNPWSKKLQEVTGYRASELKDCITCIHDLQLNRKGSSL---------MAI 342

Query: 884 RANFSQEKFEAVSEVVPLVDIPVQYFQ 964
           R  + Q +F+ VS ++P V+IP  YF+
Sbjct: 343 RDKYKQHRFKGVSTLLPPVEIPASYFE 369



 Score = 73.2 bits (178), Expect(2) = 2e-33
 Identities = 37/103 (35%), Positives = 62/103 (60%)
 Frame = +3

Query: 174 DDSGLADALMCPPYTYDILSFYRSVESKREFLPLHDYVARVQKHITAEKRALVVNKVARL 353
           D+ G  D  +C PY  DI S+ RS+E + +  P  DY+  VQ  +TA  R ++V+ +  +
Sbjct: 90  DEEGEGDPQLCAPYASDINSYLRSMEVQAKRRPAADYIETVQVDVTANMRGILVDWLVEV 149

Query: 354 TENLGYNTLCLCLSVGYLDRYLSSKEVHDGDLQIVAVASLLIA 482
            E     +  L L+V Y+DR+LS+K ++   LQ++ V+++LIA
Sbjct: 150 AEEYKLVSDTLYLTVSYIDRFLSAKSINRQKLQLLGVSAMLIA 192


>sp|Q75I54.1|CCA31_ORYSJ RecName: Full=Cyclin-A3-1; AltName: Full=G2/mitotic-specific
           cyclin-A3-1; Short=CycA3;1 gi|40538955|gb|AAR87212.1|
           putative A-type cyclin [Oryza sativa Japonica Group]
           gi|108709751|gb|ABF97546.1| G2/mitotic-specific cyclin
           C13-1, putative, expressed [Oryza sativa Japonica Group]
           gi|125544825|gb|EAY90964.1| hypothetical protein
           OsI_12578 [Oryza sativa Indica Group]
          Length = 373

 Score = 96.3 bits (238), Expect(2) = 2e-33
 Identities = 54/147 (36%), Positives = 80/147 (54%)
 Frame = +2

Query: 524 YDIWTPTVMTFLGSFSRAAQVQCKSLSSSFIFCCYYFAELSLLEYEMLRFVPSKVAAPIV 703
           +++  PT  TFL  F R++Q   K  S    F C Y AELSLLEY  +R +PS VAA +V
Sbjct: 232 FEMGNPTTKTFLRMFIRSSQEDDKYPSLPLEFMCSYLAELSLLEYGCVRLLPSVVAASVV 291

Query: 704 FLASVTFQPEKHPWNQDLEAVSNYKSSQXXXXXXXXXXXXXXRKTCSLDEDKEEILGSAI 883
           F+A +T   + +PW++ L+ V+ Y++S+              RK  SL          AI
Sbjct: 292 FVARLTLDSDTNPWSKKLQEVTGYRASELKDCITCIHDLQLNRKGSSL---------MAI 342

Query: 884 RANFSQEKFEAVSEVVPLVDIPVQYFQ 964
           R  + Q +F+ VS ++P V+IP  YF+
Sbjct: 343 RDKYKQHRFKGVSTLLPPVEIPASYFE 369



 Score = 73.2 bits (178), Expect(2) = 2e-33
 Identities = 37/103 (35%), Positives = 62/103 (60%)
 Frame = +3

Query: 174 DDSGLADALMCPPYTYDILSFYRSVESKREFLPLHDYVARVQKHITAEKRALVVNKVARL 353
           D+ G  D  +C PY  DI S+ RS+E + +  P  DY+  VQ  +TA  R ++V+ +  +
Sbjct: 90  DEEGEGDPQLCAPYASDINSYLRSMEVQAKRRPAADYIETVQVDVTANMRGILVDWLVEV 149

Query: 354 TENLGYNTLCLCLSVGYLDRYLSSKEVHDGDLQIVAVASLLIA 482
            E     +  L L+V Y+DR+LS+K ++   LQ++ V+++LIA
Sbjct: 150 AEEYKLVSDTLYLTVSYIDRFLSAKSINRQKLQLLGVSAMLIA 192


>ref|XP_002285074.2| PREDICTED: putative cyclin-A3-1-like isoform 1 [Vitis vinifera]
           gi|302142243|emb|CBI19446.3| unnamed protein product
           [Vitis vinifera]
          Length = 365

 Score = 92.0 bits (227), Expect(2) = 3e-32
 Identities = 52/147 (35%), Positives = 77/147 (52%)
 Frame = +2

Query: 524 YDIWTPTVMTFLGSFSRAAQVQCKSLSSSFIFCCYYFAELSLLEYEMLRFVPSKVAAPIV 703
           +++  PT+ TFL  F+R AQ   K+ +    F  YY AELSLL+Y  ++F+PS VAA ++
Sbjct: 224 FEMGNPTIKTFLRRFTRIAQENYKTPNLQLEFLVYYLAELSLLDYGCVKFLPSMVAASVI 283

Query: 704 FLASVTFQPEKHPWNQDLEAVSNYKSSQXXXXXXXXXXXXXXRKTCSLDEDKEEILGSAI 883
           FL+  T +P+ HPW   L+  S YK S+              R+  SL          A+
Sbjct: 284 FLSRFTLRPKTHPWCSSLQHHSGYKPSELKECVLIIHDLQLSRRGGSL---------VAV 334

Query: 884 RANFSQEKFEAVSEVVPLVDIPVQYFQ 964
           R  + Q KF+ V+ +     IPV YF+
Sbjct: 335 REKYKQHKFKCVATLSSPSVIPVSYFE 361



 Score = 73.6 bits (179), Expect(2) = 3e-32
 Identities = 36/97 (37%), Positives = 60/97 (61%)
 Frame = +3

Query: 192 DALMCPPYTYDILSFYRSVESKREFLPLHDYVARVQKHITAEKRALVVNKVARLTENLGY 371
           D  MC PY  DI  +  S+E + +  PLHDY+ +VQK ++   R ++V+ +  + E    
Sbjct: 88  DPQMCGPYATDIYEYLHSMEMEPKRRPLHDYIEKVQKDVSHNMRGILVDWLVEVAEEYKL 147

Query: 372 NTLCLCLSVGYLDRYLSSKEVHDGDLQIVAVASLLIA 482
            +  L L++ Y+DR+LSSK ++   LQ++ V+S+LIA
Sbjct: 148 ASDTLYLTISYIDRFLSSKALNRQRLQLLGVSSMLIA 184


>ref|XP_003562292.1| PREDICTED: cyclin-A3-1-like [Brachypodium distachyon]
          Length = 368

 Score = 97.4 bits (241), Expect(2) = 4e-32
 Identities = 55/147 (37%), Positives = 81/147 (55%)
 Frame = +2

Query: 524 YDIWTPTVMTFLGSFSRAAQVQCKSLSSSFIFCCYYFAELSLLEYEMLRFVPSKVAAPIV 703
           +++  PT  TFL  F R++Q   K  S S  F   Y +ELSLLEY  LRF+PS +AA  V
Sbjct: 227 FEMGNPTAKTFLRMFIRSSQEDKKYPSLSLEFMGSYLSELSLLEYSCLRFLPSAIAASAV 286

Query: 704 FLASVTFQPEKHPWNQDLEAVSNYKSSQXXXXXXXXXXXXXXRKTCSLDEDKEEILGSAI 883
           F+A +T  P+ +PW++ L++V+ YK+S+              RK  S          +AI
Sbjct: 287 FVAKLTLDPDTNPWSKKLQSVTGYKASELKDCITTIHDLQLRRKGSS---------WNAI 337

Query: 884 RANFSQEKFEAVSEVVPLVDIPVQYFQ 964
           R  + Q +F+ VS ++P V IP  YF+
Sbjct: 338 RDKYKQPRFKGVSALLPPVHIPASYFE 364



 Score = 67.8 bits (164), Expect(2) = 4e-32
 Identities = 33/99 (33%), Positives = 60/99 (60%)
 Frame = +3

Query: 186 LADALMCPPYTYDILSFYRSVESKREFLPLHDYVARVQKHITAEKRALVVNKVARLTENL 365
           + D  +C PY  DI S+ RS+E + +  P  DY+  VQK +T+  R ++V+ +  + E  
Sbjct: 89  IGDPQLCAPYASDIYSYLRSMEVEAKRRPAADYIETVQKDVTSLMRGILVDWLVEVAEEY 148

Query: 366 GYNTLCLCLSVGYLDRYLSSKEVHDGDLQIVAVASLLIA 482
              +  L L++ Y+DR+LS+  ++   LQ++ V+++LIA
Sbjct: 149 KLVSDTLYLTISYIDRFLSANSLNRQKLQLLGVSAMLIA 187