BLASTX nr result

ID: Coptis25_contig00014547 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00014547
         (690 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002322693.1| predicted protein [Populus trichocarpa] gi|2...   229   3e-58
emb|CBI29894.3| unnamed protein product [Vitis vinifera]              214   1e-53
ref|XP_003554187.1| PREDICTED: exo-poly-alpha-D-galacturonosidas...   207   1e-51
ref|XP_004136584.1| PREDICTED: exo-poly-alpha-D-galacturonosidas...   198   1e-48
ref|XP_004161486.1| PREDICTED: exo-poly-alpha-D-galacturonosidas...   197   1e-48

>ref|XP_002322693.1| predicted protein [Populus trichocarpa] gi|222867323|gb|EEF04454.1|
           predicted protein [Populus trichocarpa]
          Length = 445

 Score =  229 bits (585), Expect = 3e-58
 Identities = 103/140 (73%), Positives = 122/140 (87%)
 Frame = +3

Query: 3   SWWGRAEPIYVTTCRRHSNSNAGSISNILFVNITSDSENGVFLSGCKGGLLSNLKFINVN 182
           SWWGRAEPIYVTTC RHS+S  GSISN+ F+NIT++SENGVFLSG KGGLLSNL+FIN+N
Sbjct: 303 SWWGRAEPIYVTTCPRHSSSKEGSISNLQFINITTNSENGVFLSGSKGGLLSNLRFINMN 362

Query: 183 FNYRRWTHFADGMVDYRPGCRGLVNHSMAGIVMENIEGLEVKNVNMKWSDKQLKGWNNPL 362
             +RRWT +  G+VDYRPGC+GLVNHS AGI+ME+IEG EV+NVNM+WSD Q + W+NPL
Sbjct: 363 LTFRRWTTYPGGLVDYRPGCQGLVNHSAAGIIMEHIEGFEVENVNMRWSDYQNEPWDNPL 422

Query: 363 DFNPSTVNNISLLSFHSGIY 422
           DF PSTVNNIS L+FHS +Y
Sbjct: 423 DFRPSTVNNISFLNFHSALY 442


>emb|CBI29894.3| unnamed protein product [Vitis vinifera]
          Length = 349

 Score =  214 bits (546), Expect = 1e-53
 Identities = 101/138 (73%), Positives = 116/138 (84%), Gaps = 1/138 (0%)
 Frame = +3

Query: 6   WWGRAEPIYVTTCRRHSNSNAGSISNILFVNITSDSENGVFLSGCKGGLLSNLKFINVNF 185
           WWGRAEPIY+TTC R SNS  GSISNI F+NI++ SENGVFLSG K GLLSNL+F NVNF
Sbjct: 188 WWGRAEPIYITTCPRDSNSKEGSISNIRFINISATSENGVFLSGSKAGLLSNLRFQNVNF 247

Query: 186 NYRRWTHFADGMVDYRPGCRGLVNHSMAGIVMENIEGLEVKNVNMKWSDK-QLKGWNNPL 362
            YRRWT+F D +VDYRPGCRGLV HS AG++ME+I+GLE++NVNM+WS   Q K WNNPL
Sbjct: 248 TYRRWTNFPDDLVDYRPGCRGLVKHSPAGMIMEHIDGLELENVNMRWSGVIQNKRWNNPL 307

Query: 363 DFNPSTVNNISLLSFHSG 416
           DF PSTVNNIS L+F SG
Sbjct: 308 DFLPSTVNNISFLNFQSG 325


>ref|XP_003554187.1| PREDICTED: exo-poly-alpha-D-galacturonosidase-like [Glycine max]
          Length = 466

 Score =  207 bits (528), Expect = 1e-51
 Identities = 93/139 (66%), Positives = 119/139 (85%)
 Frame = +3

Query: 6   WWGRAEPIYVTTCRRHSNSNAGSISNILFVNITSDSENGVFLSGCKGGLLSNLKFINVNF 185
           WWGRAEPIYVT+C R S+S   SISN+LF+NIT++SENG+FLSG K GLL NL+FI+++ 
Sbjct: 321 WWGRAEPIYVTSCPRDSSSKEASISNVLFINITANSENGIFLSGSKRGLLRNLRFIDMDI 380

Query: 186 NYRRWTHFADGMVDYRPGCRGLVNHSMAGIVMENIEGLEVKNVNMKWSDKQLKGWNNPLD 365
            YRR+T++A G++DYRPGC+ LV H  AGI+ME+IEGLEVKNV M+WS+ QL+ WNNPL+
Sbjct: 381 TYRRFTNYAGGLLDYRPGCQELVKHRTAGIMMEHIEGLEVKNVEMRWSNDQLEQWNNPLE 440

Query: 366 FNPSTVNNISLLSFHSGIY 422
           F PSTVNNIS L+F+SG+Y
Sbjct: 441 FRPSTVNNISFLNFNSGLY 459


>ref|XP_004136584.1| PREDICTED: exo-poly-alpha-D-galacturonosidase-like [Cucumis
           sativus]
          Length = 463

 Score =  198 bits (503), Expect = 1e-48
 Identities = 92/139 (66%), Positives = 106/139 (76%), Gaps = 1/139 (0%)
 Frame = +3

Query: 3   SWWGRAEPIYVTTCRRHSNSNAGSISNILFVNITSDSENGVFLSGCKGGLLSNLKFINVN 182
           SWWGRAEPIYVTTC R   S  GSISNI F NIT+ SENGVFLSG K G+LSNL+F NV 
Sbjct: 321 SWWGRAEPIYVTTCPRDPGSKEGSISNIRFTNITATSENGVFLSGSKSGVLSNLRFTNVK 380

Query: 183 FNYRRWTHFADGMVDYRPGCRGLVNHSMAGIVMENIEGLEVKNVNMKWSDKQ-LKGWNNP 359
             Y+RWT +  G+ DYRPGC+G V H MAG++ME+IEGL ++NV+M W D      WNNP
Sbjct: 381 LRYKRWTKYGGGIADYRPGCQGFVKHGMAGMIMEHIEGLNLENVDMHWFDTNGSLQWNNP 440

Query: 360 LDFNPSTVNNISLLSFHSG 416
           LDF PSTVNNIS L+FHSG
Sbjct: 441 LDFRPSTVNNISFLNFHSG 459


>ref|XP_004161486.1| PREDICTED: exo-poly-alpha-D-galacturonosidase-like [Cucumis
           sativus]
          Length = 463

 Score =  197 bits (502), Expect = 1e-48
 Identities = 91/139 (65%), Positives = 106/139 (76%), Gaps = 1/139 (0%)
 Frame = +3

Query: 3   SWWGRAEPIYVTTCRRHSNSNAGSISNILFVNITSDSENGVFLSGCKGGLLSNLKFINVN 182
           SWWGRAEPIYVTTC R   S  GSISNI F+NIT+ SENGVFLSG K G+LSNL+F NV 
Sbjct: 321 SWWGRAEPIYVTTCPRDPGSKEGSISNIRFINITATSENGVFLSGSKSGVLSNLRFTNVK 380

Query: 183 FNYRRWTHFADGMVDYRPGCRGLVNHSMAGIVMENIEGLEVKNVNMKWSDKQ-LKGWNNP 359
             Y+RWT +  G+ DYRPGC+G V H MAG++ME+IEGL ++NV+M W D      WNNP
Sbjct: 381 LRYKRWTKYGGGIADYRPGCQGFVKHGMAGMIMEHIEGLNLENVDMHWFDTNGSLQWNNP 440

Query: 360 LDFNPSTVNNISLLSFHSG 416
           LDF PSTVNNIS  +FHSG
Sbjct: 441 LDFRPSTVNNISFFNFHSG 459


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