BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00014539
         (1422 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002530660.1| DNA mismatch repair protein mutS, putative [...   511   e-142
ref|XP_002326462.1| predicted protein [Populus trichocarpa] gi|2...   506   e-141
ref|XP_003538746.1| PREDICTED: mutS protein homolog 4-like [Glyc...   494   e-137
ref|XP_004169721.1| PREDICTED: DNA mismatch repair protein MSH4-...   489   e-136
ref|XP_003563107.1| PREDICTED: mutS protein homolog 4-like [Brac...   488   e-135

>ref|XP_002530660.1| DNA mismatch repair protein mutS, putative [Ricinus communis]
            gi|223529793|gb|EEF31729.1| DNA mismatch repair protein
            mutS, putative [Ricinus communis]
          Length = 553

 Score =  511 bits (1317), Expect = e-142
 Identities = 247/310 (79%), Positives = 280/310 (90%)
 Frame = +2

Query: 2    EVLCLLDMIVNSFAHTISTKPVDQYTRPKFTENGPLAIDAGRHPILESLHTDFIPNNVFL 181
            EVLCLLDM+VNSFAHTISTK VD+YTRP+FT +GPLAIDAGRHPILES+H DF+PNN+F+
Sbjct: 244  EVLCLLDMLVNSFAHTISTKLVDRYTRPEFTSSGPLAIDAGRHPILESIHNDFVPNNLFV 303

Query: 182  SEASNMVIVMGPNMSGKSTYLQQVCLVVILAQIGCYVPARFSSLRVADRIFTRMGTGDNL 361
            SEASNMVIVMGPNMSGKSTYLQQVCL+VILAQIGCYVPARF ++R+ DRIFTRMG+ DNL
Sbjct: 304  SEASNMVIVMGPNMSGKSTYLQQVCLIVILAQIGCYVPARFLTIRIVDRIFTRMGSVDNL 363

Query: 362  ESNSSTFMTEMKETAFIMQNVSSRSLIVMDELGRATSSSDGLAIAWSCCEHLLSLKAYTI 541
            ESNSSTFMTEMKETAFIMQNVS RSLI+MDELGRATSSSDG +IAWSCCEHLLSLKAYTI
Sbjct: 364  ESNSSTFMTEMKETAFIMQNVSQRSLIIMDELGRATSSSDGFSIAWSCCEHLLSLKAYTI 423

Query: 542  FATHMENLSELATVYPNVKILHFDVDVKNNRLDFKFHLNDGPKYIPHYXXXXXXXXXXXC 721
            FATHMENLSELAT+YPNVK+LH DV VKNNRLDFKF L DGP+++PHY            
Sbjct: 424  FATHMENLSELATIYPNVKLLHLDVTVKNNRLDFKFQLKDGPRHVPHYGLLLAEVAGLPS 483

Query: 722  SVIESAKSITSKITEKDVRRMEVNCKQYQSVQLAYHVAQRLICLKYSSQDEGSIREALQN 901
            SVIE+A+SITSKI EK++ +MEV+C QY+ +Q+ YHVAQRLICLKYSSQDE SIR+ALQN
Sbjct: 484  SVIETARSITSKIKEKEITQMEVHCHQYRQLQMIYHVAQRLICLKYSSQDEDSIRQALQN 543

Query: 902  LKESYIDGRL 931
            LKESY+DG++
Sbjct: 544  LKESYMDGKI 553


>ref|XP_002326462.1| predicted protein [Populus trichocarpa] gi|222833784|gb|EEE72261.1|
            predicted protein [Populus trichocarpa]
          Length = 700

 Score =  506 bits (1302), Expect = e-141
 Identities = 245/310 (79%), Positives = 276/310 (89%)
 Frame = +2

Query: 2    EVLCLLDMIVNSFAHTISTKPVDQYTRPKFTENGPLAIDAGRHPILESLHTDFIPNNVFL 181
            EVLCLLDMI+NSFA+TISTKPVD+YTRP+FT NGPLAIDAGRHPILES+H DF+PNN+FL
Sbjct: 391  EVLCLLDMIINSFAYTISTKPVDRYTRPEFTSNGPLAIDAGRHPILESIHNDFVPNNIFL 450

Query: 182  SEASNMVIVMGPNMSGKSTYLQQVCLVVILAQIGCYVPARFSSLRVADRIFTRMGTGDNL 361
            SEASNMVIVMGPNMSGKSTYLQQVCL+VILAQIGCYVPARFS++RV DRIFTRMG+ DNL
Sbjct: 451  SEASNMVIVMGPNMSGKSTYLQQVCLIVILAQIGCYVPARFSTIRVVDRIFTRMGSVDNL 510

Query: 362  ESNSSTFMTEMKETAFIMQNVSSRSLIVMDELGRATSSSDGLAIAWSCCEHLLSLKAYTI 541
            ESNSSTFMTEMKETAFIMQNVS  SLI MDELGRATSS+DG AIAWSCCEHLLSLKAY+I
Sbjct: 511  ESNSSTFMTEMKETAFIMQNVSQSSLIFMDELGRATSSADGFAIAWSCCEHLLSLKAYSI 570

Query: 542  FATHMENLSELATVYPNVKILHFDVDVKNNRLDFKFHLNDGPKYIPHYXXXXXXXXXXXC 721
            FATHMENLSELAT+YPNV+I+HF VD+K+NRLDFKF L DGP+++PHY            
Sbjct: 571  FATHMENLSELATIYPNVRIVHFHVDIKSNRLDFKFQLEDGPRHVPHYGLLLAEVAGLPS 630

Query: 722  SVIESAKSITSKITEKDVRRMEVNCKQYQSVQLAYHVAQRLICLKYSSQDEGSIREALQN 901
            SVIE A+SITSKITEK  ++ EVNC+QY  +Q+ Y VAQRLICLK+S+QDE SIR+ALQN
Sbjct: 631  SVIEMARSITSKITEKQTKQTEVNCRQYHQLQMVYRVAQRLICLKHSNQDEDSIRQALQN 690

Query: 902  LKESYIDGRL 931
            LKE YI+G L
Sbjct: 691  LKEQYINGTL 700


>ref|XP_003538746.1| PREDICTED: mutS protein homolog 4-like [Glycine max]
          Length = 794

 Score =  494 bits (1273), Expect = e-137
 Identities = 240/310 (77%), Positives = 273/310 (88%)
 Frame = +2

Query: 2    EVLCLLDMIVNSFAHTISTKPVDQYTRPKFTENGPLAIDAGRHPILESLHTDFIPNNVFL 181
            EVLCLLDMIVNSFAH ISTKPVD+YTRP+FTENGPLAID+GRHPILES+H DF+ NN+FL
Sbjct: 483  EVLCLLDMIVNSFAHMISTKPVDRYTRPEFTENGPLAIDSGRHPILESIHNDFVANNIFL 542

Query: 182  SEASNMVIVMGPNMSGKSTYLQQVCLVVILAQIGCYVPARFSSLRVADRIFTRMGTGDNL 361
            +EASNM IVMGPNMSGKSTYLQQVCL+VILAQ+GCYVPARFS++RV DR+FTRMG  DNL
Sbjct: 543  TEASNMAIVMGPNMSGKSTYLQQVCLIVILAQVGCYVPARFSTVRVVDRMFTRMGAVDNL 602

Query: 362  ESNSSTFMTEMKETAFIMQNVSSRSLIVMDELGRATSSSDGLAIAWSCCEHLLSLKAYTI 541
            ESNSSTFMTEMKETAFIMQNVS RSLIVMDELGRATSSSDG AIAWSCCEHLLSLK YT+
Sbjct: 603  ESNSSTFMTEMKETAFIMQNVSQRSLIVMDELGRATSSSDGFAIAWSCCEHLLSLKTYTV 662

Query: 542  FATHMENLSELATVYPNVKILHFDVDVKNNRLDFKFHLNDGPKYIPHYXXXXXXXXXXXC 721
            FATHMEN+SEL T+YPNVKILHFDV++KNN LDFKF L +G K IPHY            
Sbjct: 663  FATHMENISELVTMYPNVKILHFDVELKNNHLDFKFQLKEGSKRIPHYGLLLAEVAGLPS 722

Query: 722  SVIESAKSITSKITEKDVRRMEVNCKQYQSVQLAYHVAQRLICLKYSSQDEGSIREALQN 901
            SV+E+A+ ITS+I+EK+V+RMEVNC Q+ S+Q AYHVAQRL+CLKY +QDE +IR+AL+N
Sbjct: 723  SVVETARMITSRISEKEVKRMEVNCLQHHSIQKAYHVAQRLLCLKYCNQDEDTIRQALRN 782

Query: 902  LKESYIDGRL 931
            LKES I  +L
Sbjct: 783  LKESCIKEKL 792


>ref|XP_004169721.1| PREDICTED: DNA mismatch repair protein MSH4-like, partial [Cucumis
            sativus]
          Length = 770

 Score =  489 bits (1259), Expect = e-136
 Identities = 237/310 (76%), Positives = 272/310 (87%)
 Frame = +2

Query: 2    EVLCLLDMIVNSFAHTISTKPVDQYTRPKFTENGPLAIDAGRHPILESLHTDFIPNNVFL 181
            EVLCLLDMIVNSFAHTISTKPVD+YTRP FTENGP+AI+A RHPILES+H DF+ N++FL
Sbjct: 461  EVLCLLDMIVNSFAHTISTKPVDRYTRPNFTENGPMAIEAARHPILESIHNDFVANSIFL 520

Query: 182  SEASNMVIVMGPNMSGKSTYLQQVCLVVILAQIGCYVPARFSSLRVADRIFTRMGTGDNL 361
            SEASNM+IVMGPNMSGKSTYLQQ+CL+VILAQIGCYVPA FS+LRV DRIFTRMGT D+L
Sbjct: 521  SEASNMIIVMGPNMSGKSTYLQQMCLLVILAQIGCYVPAHFSTLRVVDRIFTRMGTDDSL 580

Query: 362  ESNSSTFMTEMKETAFIMQNVSSRSLIVMDELGRATSSSDGLAIAWSCCEHLLSLKAYTI 541
            ESNSSTFMTEMKETAF+MQNVS RSL+V+DELGRATSSSDG AIAWSCCE+LL+LKAYTI
Sbjct: 581  ESNSSTFMTEMKETAFVMQNVSQRSLVVVDELGRATSSSDGFAIAWSCCEYLLTLKAYTI 640

Query: 542  FATHMENLSELATVYPNVKILHFDVDVKNNRLDFKFHLNDGPKYIPHYXXXXXXXXXXXC 721
            FATHME LSELAT+YPNVKILHF VD++N+RLDFKF L DG +++PHY            
Sbjct: 641  FATHMEGLSELATIYPNVKILHFHVDIRNHRLDFKFQLKDGIRHVPHYGLLLAEVAGLPS 700

Query: 722  SVIESAKSITSKITEKDVRRMEVNCKQYQSVQLAYHVAQRLICLKYSSQDEGSIREALQN 901
            SVIE+A+ ITS+I EK+ RRME+N  QY  +++ Y+VAQRLICLKYSS DE S+REAL+N
Sbjct: 701  SVIETARDITSRIKEKEERRMEINHLQYHPIRMTYNVAQRLICLKYSSHDEDSVREALRN 760

Query: 902  LKESYIDGRL 931
            LKE YI GRL
Sbjct: 761  LKEGYISGRL 770


>ref|XP_003563107.1| PREDICTED: mutS protein homolog 4-like [Brachypodium distachyon]
          Length = 726

 Score =  488 bits (1257), Expect = e-135
 Identities = 233/310 (75%), Positives = 279/310 (90%)
 Frame = +2

Query: 2    EVLCLLDMIVNSFAHTISTKPVDQYTRPKFTENGPLAIDAGRHPILESLHTDFIPNNVFL 181
            EVLCLLDMIVNSFA+TISTKPVD+YTRP+FT++GP+AI+AGRHPILE LHTDF+PNN+FL
Sbjct: 410  EVLCLLDMIVNSFANTISTKPVDRYTRPEFTDDGPMAINAGRHPILEGLHTDFVPNNIFL 469

Query: 182  SEASNMVIVMGPNMSGKSTYLQQVCLVVILAQIGCYVPARFSSLRVADRIFTRMGTGDNL 361
            SEASNMV+VMGPNMSGKSTYLQQ+CL+VILAQ+GCYVPA+F+SLRV DRIFTR+GTGDN+
Sbjct: 470  SEASNMVLVMGPNMSGKSTYLQQICLIVILAQVGCYVPAQFASLRVVDRIFTRIGTGDNV 529

Query: 362  ESNSSTFMTEMKETAFIMQNVSSRSLIVMDELGRATSSSDGLAIAWSCCEHLLSLKAYTI 541
            E+NSSTFMTEMKETAFIMQNVSS+SL+V+DELGRATSSSDGLAIAWSCCEHLLSLKAYT+
Sbjct: 530  ENNSSTFMTEMKETAFIMQNVSSKSLVVVDELGRATSSSDGLAIAWSCCEHLLSLKAYTV 589

Query: 542  FATHMENLSELATVYPNVKILHFDVDVKNNRLDFKFHLNDGPKYIPHYXXXXXXXXXXXC 721
            FATHME LSELAT+YPNVK LHF+V+++NNRLDFKF L DG + +PHY            
Sbjct: 590  FATHMEGLSELATMYPNVKTLHFEVNLRNNRLDFKFQLKDGLRRVPHYGLLLARVAGLPA 649

Query: 722  SVIESAKSITSKITEKDVRRMEVNCKQYQSVQLAYHVAQRLICLKYSSQDEGSIREALQN 901
            SV+++A +ITS+ITE+++ RM+ NC+QY+ +Q+AY  AQRLICLKYS+Q +  IREALQ+
Sbjct: 650  SVVDTATNITSRITEQEMVRMDANCEQYRPLQMAYQAAQRLICLKYSNQGDEYIREALQD 709

Query: 902  LKESYIDGRL 931
            LKESY  G+L
Sbjct: 710  LKESYAAGKL 719