BLASTX nr result

ID: Coptis25_contig00014537 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00014537
         (229 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK22081.1| unknown [Picea sitchensis]                             105   3e-21
ref|XP_002275312.1| PREDICTED: eukaryotic translation initiation...   104   9e-21
emb|CAN76150.1| hypothetical protein VITISV_012671 [Vitis vinifera]   104   9e-21
ref|XP_001762617.1| predicted protein [Physcomitrella patens sub...   103   1e-20
ref|XP_001783099.1| predicted protein [Physcomitrella patens sub...   103   1e-20

>gb|ABK22081.1| unknown [Picea sitchensis]
          Length = 343

 Score =  105 bits (263), Expect = 3e-21
 Identities = 52/75 (69%), Positives = 63/75 (84%)
 Frame = -3

Query: 227 YNNIEGIISFVQLSRSIFKNASAFMKVGGQEPVIVTRVDKEKGYIDLSRRIVSDEDIAAC 48
           YNNIEG+I F +LSR   ++ S+ +KVG QEPV+V RVDKEKGYIDLS+R VS+EDI AC
Sbjct: 43  YNNIEGMILFSELSRRRIRSVSSLIKVGRQEPVMVLRVDKEKGYIDLSKRRVSEEDIQAC 102

Query: 47  EIRYNKSQIVHSIMR 3
           E RYNKS++VHSIMR
Sbjct: 103 EERYNKSKLVHSIMR 117


>ref|XP_002275312.1| PREDICTED: eukaryotic translation initiation factor 2 subunit alpha
           [Vitis vinifera] gi|297745848|emb|CBI15904.3| unnamed
           protein product [Vitis vinifera]
          Length = 344

 Score =  104 bits (259), Expect = 9e-21
 Identities = 51/75 (68%), Positives = 62/75 (82%)
 Frame = -3

Query: 227 YNNIEGIISFVQLSRSIFKNASAFMKVGGQEPVIVTRVDKEKGYIDLSRRIVSDEDIAAC 48
           YNNIEG+I F +LSR   ++ S+ +KVG QEPV+V RVDKEKGYIDLS+R VS+EDI  C
Sbjct: 43  YNNIEGMILFSELSRRRIRSVSSLIKVGRQEPVMVLRVDKEKGYIDLSKRRVSEEDIQVC 102

Query: 47  EIRYNKSQIVHSIMR 3
           E RYNKS++VHSIMR
Sbjct: 103 EERYNKSKLVHSIMR 117


>emb|CAN76150.1| hypothetical protein VITISV_012671 [Vitis vinifera]
          Length = 152

 Score =  104 bits (259), Expect = 9e-21
 Identities = 51/75 (68%), Positives = 62/75 (82%)
 Frame = -3

Query: 227 YNNIEGIISFVQLSRSIFKNASAFMKVGGQEPVIVTRVDKEKGYIDLSRRIVSDEDIAAC 48
           YNNIEG+I F +LSR   ++ S+ +KVG QEPV+V RVDKEKGYIDLS+R VS+EDI  C
Sbjct: 43  YNNIEGMILFSELSRRRIRSVSSLIKVGRQEPVMVLRVDKEKGYIDLSKRRVSEEDIQVC 102

Query: 47  EIRYNKSQIVHSIMR 3
           E RYNKS++VHSIMR
Sbjct: 103 EERYNKSKLVHSIMR 117


>ref|XP_001762617.1| predicted protein [Physcomitrella patens subsp. patens]
           gi|162686350|gb|EDQ72740.1| predicted protein
           [Physcomitrella patens subsp. patens]
          Length = 333

 Score =  103 bits (257), Expect = 1e-20
 Identities = 50/75 (66%), Positives = 63/75 (84%)
 Frame = -3

Query: 227 YNNIEGIISFVQLSRSIFKNASAFMKVGGQEPVIVTRVDKEKGYIDLSRRIVSDEDIAAC 48
           YNNIEG+I   +LSR   ++ S+ +KVG QEPV+V RVDKEKGYIDLS+R VS+ED+A+C
Sbjct: 39  YNNIEGMILLSELSRRRIRSISSLIKVGRQEPVMVLRVDKEKGYIDLSKRRVSEEDVASC 98

Query: 47  EIRYNKSQIVHSIMR 3
           E RYNKS++VHSIMR
Sbjct: 99  EERYNKSKLVHSIMR 113


>ref|XP_001783099.1| predicted protein [Physcomitrella patens subsp. patens]
           gi|162665416|gb|EDQ52102.1| predicted protein
           [Physcomitrella patens subsp. patens]
          Length = 328

 Score =  103 bits (257), Expect = 1e-20
 Identities = 51/75 (68%), Positives = 62/75 (82%)
 Frame = -3

Query: 227 YNNIEGIISFVQLSRSIFKNASAFMKVGGQEPVIVTRVDKEKGYIDLSRRIVSDEDIAAC 48
           YNNIEG+I   +LSR   ++ S+ +KVG QEPV+V RVDKEKGYIDLS+R VS+EDIA C
Sbjct: 39  YNNIEGMILLSELSRRRIRSISSLIKVGRQEPVMVVRVDKEKGYIDLSKRRVSEEDIARC 98

Query: 47  EIRYNKSQIVHSIMR 3
           E RYNKS++VHSIMR
Sbjct: 99  EERYNKSKLVHSIMR 113


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