BLASTX nr result

ID: Coptis25_contig00014533 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00014533
         (377 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN78233.1| hypothetical protein VITISV_027466 [Vitis vinifera]    71   6e-17
emb|CAN63250.1| hypothetical protein VITISV_017354 [Vitis vinifera]    69   1e-16
emb|CAN79028.1| hypothetical protein VITISV_037224 [Vitis vinifera]    67   7e-16
emb|CAN80126.1| hypothetical protein VITISV_013417 [Vitis vinifera]    66   1e-15
emb|CAN79235.1| hypothetical protein VITISV_021060 [Vitis vinifera]    68   5e-15

>emb|CAN78233.1| hypothetical protein VITISV_027466 [Vitis vinifera]
          Length = 805

 Score = 71.2 bits (173), Expect(2) = 6e-17
 Identities = 31/62 (50%), Positives = 45/62 (72%)
 Frame = -1

Query: 188 DIRQPMLSCSRKADGKTIMSTYSFDQESALNSLAKLIILHEYPIAMVEHYGFREFCRNIQ 9
           DIRQ +L+  RK  GK  +  ++FDQE +   LA+ IILHEYP+++V+H GFREF  ++Q
Sbjct: 90  DIRQQLLAVERKGHGKVQIGGFTFDQEISREKLARAIILHEYPLSIVDHVGFREFATSLQ 149

Query: 8   PM 3
           P+
Sbjct: 150 PL 151



 Score = 40.8 bits (94), Expect(2) = 6e-17
 Identities = 20/52 (38%), Positives = 26/52 (50%)
 Frame = -2

Query: 352 SRKRRPTSEVWNHFXXXXXXXXXXXICNYCANKLVGGPKDGTSHLCNHLRIC 197
           S++R+ TS VWN F           IC +C  KL    K+GT HL  H+  C
Sbjct: 32  SKRRKLTSVVWNDFDKIIEDGQDYAICKHCKGKLKADSKNGTKHLHVHIDRC 83


>emb|CAN63250.1| hypothetical protein VITISV_017354 [Vitis vinifera]
          Length = 1074

 Score = 68.6 bits (166), Expect(2) = 1e-16
 Identities = 29/62 (46%), Positives = 45/62 (72%)
 Frame = -1

Query: 188 DIRQPMLSCSRKADGKTIMSTYSFDQESALNSLAKLIILHEYPIAMVEHYGFREFCRNIQ 9
           DIRQ +L+  RK  GK  +  ++FD+E +   LA+ IILHEYP+++V+H GFR+F  ++Q
Sbjct: 180 DIRQQLLAVERKCHGKVQIGGFTFDKEISREKLARAIILHEYPLSIVDHVGFRDFATSLQ 239

Query: 8   PM 3
           P+
Sbjct: 240 PL 241



 Score = 42.4 bits (98), Expect(2) = 1e-16
 Identities = 20/52 (38%), Positives = 27/52 (51%)
 Frame = -2

Query: 352 SRKRRPTSEVWNHFXXXXXXXXXXXICNYCANKLVGGPKDGTSHLCNHLRIC 197
           S++R+ TS+VWN F           IC +C  KL    K+GT HL  H+  C
Sbjct: 122 SKRRKLTSDVWNDFDKIIENGQDYVICKHCKGKLKADSKNGTKHLHVHIDRC 173


>emb|CAN79028.1| hypothetical protein VITISV_037224 [Vitis vinifera]
          Length = 448

 Score = 67.4 bits (163), Expect(2) = 7e-16
 Identities = 28/62 (45%), Positives = 45/62 (72%)
 Frame = -1

Query: 188 DIRQPMLSCSRKADGKTIMSTYSFDQESALNSLAKLIILHEYPIAMVEHYGFREFCRNIQ 9
           DI+Q +L+  RK  GK  +  ++FDQ+ +   LA +IILHEYP+++V+H GFR+F  ++Q
Sbjct: 90  DIKQQLLAVERKGYGKVQIGNFTFDQDISREKLAHVIILHEYPLSIVDHAGFRDFANSLQ 149

Query: 8   PM 3
           P+
Sbjct: 150 PL 151



 Score = 41.2 bits (95), Expect(2) = 7e-16
 Identities = 21/51 (41%), Positives = 26/51 (50%)
 Frame = -2

Query: 349 RKRRPTSEVWNHFXXXXXXXXXXXICNYCANKLVGGPKDGTSHLCNHLRIC 197
           +KR+ TS VWN F           IC +C +KL    K+GT HL  HL  C
Sbjct: 33  KKRKLTSIVWNDFEKVIINGQDYAICKHCKSKLKADSKNGTKHLHIHLDRC 83


>emb|CAN80126.1| hypothetical protein VITISV_013417 [Vitis vinifera]
          Length = 1266

 Score = 65.9 bits (159), Expect(2) = 1e-15
 Identities = 28/62 (45%), Positives = 44/62 (70%)
 Frame = -1

Query: 188 DIRQPMLSCSRKADGKTIMSTYSFDQESALNSLAKLIILHEYPIAMVEHYGFREFCRNIQ 9
           DI+Q  L+  RK  GK  +  ++FDQ+ +   LA+ IILHEYP+++V+H GFR+F  ++Q
Sbjct: 168 DIKQQFLAIERKGYGKVQIGGFTFDQDISREKLARAIILHEYPLSIVDHAGFRDFASSLQ 227

Query: 8   PM 3
           P+
Sbjct: 228 PL 229



 Score = 41.6 bits (96), Expect(2) = 1e-15
 Identities = 21/51 (41%), Positives = 26/51 (50%)
 Frame = -2

Query: 349 RKRRPTSEVWNHFXXXXXXXXXXXICNYCANKLVGGPKDGTSHLCNHLRIC 197
           +KR+ TS VWN F           IC +C +KL    K+GT HL  HL  C
Sbjct: 111 KKRKLTSIVWNEFEKVIIDGQDYAICKHCKSKLKADSKNGTKHLHVHLDRC 161


>emb|CAN79235.1| hypothetical protein VITISV_021060 [Vitis vinifera]
          Length = 462

 Score = 67.8 bits (164), Expect(2) = 5e-15
 Identities = 28/62 (45%), Positives = 45/62 (72%)
 Frame = -1

Query: 188 DIRQPMLSCSRKADGKTIMSTYSFDQESALNSLAKLIILHEYPIAMVEHYGFREFCRNIQ 9
           DIRQ +L+   K  GK  +  ++FDQE ++  LA+ IILHEYP+++V+H GF++F  ++Q
Sbjct: 80  DIRQQLLAVYSKGHGKVQIGDFTFDQEISIEKLARAIILHEYPLSIVDHVGFKDFAXSLQ 139

Query: 8   PM 3
           P+
Sbjct: 140 PL 141



 Score = 37.7 bits (86), Expect(2) = 5e-15
 Identities = 19/52 (36%), Positives = 25/52 (48%)
 Frame = -2

Query: 352 SRKRRPTSEVWNHFXXXXXXXXXXXICNYCANKLVGGPKDGTSHLCNHLRIC 197
           S++R+ TS VWN F           IC +   KL    K+GT HL  H+  C
Sbjct: 22  SKRRKLTSVVWNDFDKIIEDGQDYAICKHXKGKLKADSKNGTKHLLVHIDRC 73


Top