BLASTX nr result

ID: Coptis25_contig00014508 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00014508
         (1560 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265950.2| PREDICTED: putative hydroxymethylpyrimidine/...   586   e-165
emb|CBI29762.3| unnamed protein product [Vitis vinifera]              586   e-165
gb|ABK95478.1| unknown [Populus trichocarpa]                          555   e-155
ref|XP_002304056.1| predicted protein [Populus trichocarpa] gi|2...   551   e-154
ref|XP_002530677.1| phosphomethylpyrimidine kinase, putative [Ri...   548   e-153

>ref|XP_002265950.2| PREDICTED: putative hydroxymethylpyrimidine/phosphomethylpyrimidine
            kinase 2-like [Vitis vinifera]
          Length = 681

 Score =  586 bits (1511), Expect = e-165
 Identities = 290/381 (76%), Positives = 331/381 (86%)
 Frame = -3

Query: 1558 ADPSILMAFREELLPMADIVTPNLKEASALLGGMKLVTVADMCSAAKSIHDLGPRYVLVK 1379
            A PSIL AFREELLPMADIVTPNLKEASALLGG++L TV+DMC+AAK IHD+GPR VLVK
Sbjct: 301  AGPSILAAFREELLPMADIVTPNLKEASALLGGLQLETVSDMCTAAKLIHDMGPRNVLVK 360

Query: 1378 GGDLPAPLDAVDIFFDGDHCHELRASRIQTHNTHGTGCTLASCIAAELAKGSLMLPAVQV 1199
            GGDLP+ LDAVDIFFDGD  +ELR+SRI+T NTHGTGCTLASCIAAELAKGS +L AV+ 
Sbjct: 361  GGDLPSSLDAVDIFFDGDDFYELRSSRIKTRNTHGTGCTLASCIAAELAKGSQILSAVKA 420

Query: 1198 AKRFVETALDYSKDIVIGSGPQGPFDHLFKLKRSTYNSSRRRGFNPNDLLLYAITDSGMN 1019
            AK ++ETALDYSKDI IG+G QGPFDHL KLK +  NS R++ FNP +L LYA+TDSGMN
Sbjct: 421  AKHYIETALDYSKDIAIGNGFQGPFDHLLKLKSNIRNSFRKQAFNPANLFLYAVTDSGMN 480

Query: 1018 KKWARSIIDAVKASIEGGATIIQLREKDAETREFVRLAEACLEICHSHGVALLINDRVDI 839
            KKW RSI +AVKA+IEGGATI+QLREKDAETR+F+  A+AC+EICHSHGV LLINDR+D+
Sbjct: 481  KKWGRSITEAVKAAIEGGATIVQLREKDAETRDFLEAAKACVEICHSHGVPLLINDRIDV 540

Query: 838  ALACDADGVHLGQSDMPPRVARTLLGPGKIIGVSCKTPEQALQAWADGADYIGCGGVFPT 659
            ALACDADGVH+GQSD+P RV RTLLGP KIIGVSCKTPEQA +AW DGADYIGCGGV+PT
Sbjct: 541  ALACDADGVHVGQSDIPARVVRTLLGPEKIIGVSCKTPEQAEKAWIDGADYIGCGGVYPT 600

Query: 658  STKENNLTVGLSGLKTVCSASKVPVVAIGGIGLANAHSVMEIGEPNLHGVAVVSALFDRE 479
            +TK NN+TVGL GLKTVC ASK+PVVAIGGI  +NA +VMEIG PNL GVAVVSALFDRE
Sbjct: 601  NTKANNITVGLDGLKTVCLASKLPVVAIGGINASNARTVMEIGVPNLKGVAVVSALFDRE 660

Query: 478  SVSSETRKLHSVLMDVLSVAK 416
             V +ET+KLH  L    ++ K
Sbjct: 661  CVLTETQKLHGDLTQAAAMVK 681


>emb|CBI29762.3| unnamed protein product [Vitis vinifera]
          Length = 497

 Score =  586 bits (1511), Expect = e-165
 Identities = 290/381 (76%), Positives = 331/381 (86%)
 Frame = -3

Query: 1558 ADPSILMAFREELLPMADIVTPNLKEASALLGGMKLVTVADMCSAAKSIHDLGPRYVLVK 1379
            A PSIL AFREELLPMADIVTPNLKEASALLGG++L TV+DMC+AAK IHD+GPR VLVK
Sbjct: 117  AGPSILAAFREELLPMADIVTPNLKEASALLGGLQLETVSDMCTAAKLIHDMGPRNVLVK 176

Query: 1378 GGDLPAPLDAVDIFFDGDHCHELRASRIQTHNTHGTGCTLASCIAAELAKGSLMLPAVQV 1199
            GGDLP+ LDAVDIFFDGD  +ELR+SRI+T NTHGTGCTLASCIAAELAKGS +L AV+ 
Sbjct: 177  GGDLPSSLDAVDIFFDGDDFYELRSSRIKTRNTHGTGCTLASCIAAELAKGSQILSAVKA 236

Query: 1198 AKRFVETALDYSKDIVIGSGPQGPFDHLFKLKRSTYNSSRRRGFNPNDLLLYAITDSGMN 1019
            AK ++ETALDYSKDI IG+G QGPFDHL KLK +  NS R++ FNP +L LYA+TDSGMN
Sbjct: 237  AKHYIETALDYSKDIAIGNGFQGPFDHLLKLKSNIRNSFRKQAFNPANLFLYAVTDSGMN 296

Query: 1018 KKWARSIIDAVKASIEGGATIIQLREKDAETREFVRLAEACLEICHSHGVALLINDRVDI 839
            KKW RSI +AVKA+IEGGATI+QLREKDAETR+F+  A+AC+EICHSHGV LLINDR+D+
Sbjct: 297  KKWGRSITEAVKAAIEGGATIVQLREKDAETRDFLEAAKACVEICHSHGVPLLINDRIDV 356

Query: 838  ALACDADGVHLGQSDMPPRVARTLLGPGKIIGVSCKTPEQALQAWADGADYIGCGGVFPT 659
            ALACDADGVH+GQSD+P RV RTLLGP KIIGVSCKTPEQA +AW DGADYIGCGGV+PT
Sbjct: 357  ALACDADGVHVGQSDIPARVVRTLLGPEKIIGVSCKTPEQAEKAWIDGADYIGCGGVYPT 416

Query: 658  STKENNLTVGLSGLKTVCSASKVPVVAIGGIGLANAHSVMEIGEPNLHGVAVVSALFDRE 479
            +TK NN+TVGL GLKTVC ASK+PVVAIGGI  +NA +VMEIG PNL GVAVVSALFDRE
Sbjct: 417  NTKANNITVGLDGLKTVCLASKLPVVAIGGINASNARTVMEIGVPNLKGVAVVSALFDRE 476

Query: 478  SVSSETRKLHSVLMDVLSVAK 416
             V +ET+KLH  L    ++ K
Sbjct: 477  CVLTETQKLHGDLTQAAAMVK 497


>gb|ABK95478.1| unknown [Populus trichocarpa]
          Length = 531

 Score =  555 bits (1430), Expect = e-155
 Identities = 275/378 (72%), Positives = 327/378 (86%)
 Frame = -3

Query: 1558 ADPSILMAFREELLPMADIVTPNLKEASALLGGMKLVTVADMCSAAKSIHDLGPRYVLVK 1379
            A PSIL  FREELLP+A+IVTPN+KEASALLGG++L TVADM +AA+ +H LGPR VLVK
Sbjct: 148  AGPSILSTFREELLPIANIVTPNIKEASALLGGIRLETVADMRNAAELLHALGPRNVLVK 207

Query: 1378 GGDLPAPLDAVDIFFDGDHCHELRASRIQTHNTHGTGCTLASCIAAELAKGSLMLPAVQV 1199
            GGDLP  LDAVDIFF+G+H +ELR+SRI+T NTHGTGCTLASCIAAELAKGS ML AV+V
Sbjct: 208  GGDLPDSLDAVDIFFNGEHFYELRSSRIKTRNTHGTGCTLASCIAAELAKGSPMLTAVRV 267

Query: 1198 AKRFVETALDYSKDIVIGSGPQGPFDHLFKLKRSTYNSSRRRGFNPNDLLLYAITDSGMN 1019
            AKR+VETAL+YSKDI+IG+G QGPFDHL +LK  +++  R+  FNP+DL LYA+TDSGMN
Sbjct: 268  AKRYVETALEYSKDILIGNGIQGPFDHLLRLKSGSHSFRRKDAFNPSDLFLYAVTDSGMN 327

Query: 1018 KKWARSIIDAVKASIEGGATIIQLREKDAETREFVRLAEACLEICHSHGVALLINDRVDI 839
            KKW RS++DAV A+I+GGATI+QLR+KDA T++F+  A++CL +C SHGV LLINDRVD+
Sbjct: 328  KKWGRSVVDAVAAAIQGGATIVQLRDKDAGTKDFLETAKSCLAVCRSHGVPLLINDRVDV 387

Query: 838  ALACDADGVHLGQSDMPPRVARTLLGPGKIIGVSCKTPEQALQAWADGADYIGCGGVFPT 659
            ALA DADGVH+GQSDMP  VARTLLGP KIIGVSCKT EQA QAW  GADYIGCGGV+ T
Sbjct: 388  ALASDADGVHVGQSDMPATVARTLLGPEKIIGVSCKTIEQAQQAWIGGADYIGCGGVYST 447

Query: 658  STKENNLTVGLSGLKTVCSASKVPVVAIGGIGLANAHSVMEIGEPNLHGVAVVSALFDRE 479
            +TK NN T+GL GLKTVCSASK+PVVAIGGI  +NA +VME+G PNL GVAVVSALFDRE
Sbjct: 448  NTKANNPTIGLDGLKTVCSASKLPVVAIGGINASNAGTVMEMGVPNLKGVAVVSALFDRE 507

Query: 478  SVSSETRKLHSVLMDVLS 425
            +V +ET+KLH++LM+  S
Sbjct: 508  NVLAETKKLHALLMEASS 525


>ref|XP_002304056.1| predicted protein [Populus trichocarpa] gi|222841488|gb|EEE79035.1|
            predicted protein [Populus trichocarpa]
          Length = 507

 Score =  551 bits (1419), Expect = e-154
 Identities = 275/378 (72%), Positives = 325/378 (85%)
 Frame = -3

Query: 1558 ADPSILMAFREELLPMADIVTPNLKEASALLGGMKLVTVADMCSAAKSIHDLGPRYVLVK 1379
            A PSIL  FREELLPMA+IVTPN+KEASALLGG++L TVADM +AA+ +H LGPR VLVK
Sbjct: 124  AGPSILSTFREELLPMANIVTPNIKEASALLGGIRLETVADMRNAAELLHALGPRNVLVK 183

Query: 1378 GGDLPAPLDAVDIFFDGDHCHELRASRIQTHNTHGTGCTLASCIAAELAKGSLMLPAVQV 1199
            GGDLP  LDAVDIFF+G+H +ELR+SRI+T NTHGTGCTLASCIAAELAKGS ML AV+V
Sbjct: 184  GGDLPDSLDAVDIFFNGEHFYELRSSRIKTRNTHGTGCTLASCIAAELAKGSPMLTAVRV 243

Query: 1198 AKRFVETALDYSKDIVIGSGPQGPFDHLFKLKRSTYNSSRRRGFNPNDLLLYAITDSGMN 1019
            AKR+VETAL+YSKDI+IG+G QGPFDHL +LK  +++  R+  FNP+DL LYA+TDSGMN
Sbjct: 244  AKRYVETALEYSKDILIGNGIQGPFDHLLRLKSGSHSFHRKDAFNPSDLFLYAVTDSGMN 303

Query: 1018 KKWARSIIDAVKASIEGGATIIQLREKDAETREFVRLAEACLEICHSHGVALLINDRVDI 839
            KKW RS +DAV A+I+GGATI+QLR+KDA T++F+  A++CL +C SHGV LLIND VD+
Sbjct: 304  KKWGRSTVDAVAAAIQGGATIVQLRDKDAGTKDFLETAKSCLAVCRSHGVPLLINDCVDV 363

Query: 838  ALACDADGVHLGQSDMPPRVARTLLGPGKIIGVSCKTPEQALQAWADGADYIGCGGVFPT 659
            ALA DADGVH+GQSDMP  VARTLLGP KIIGVSCKT EQA QAW  GADYIGCGGV+ T
Sbjct: 364  ALASDADGVHVGQSDMPATVARTLLGPEKIIGVSCKTIEQAQQAWIGGADYIGCGGVYST 423

Query: 658  STKENNLTVGLSGLKTVCSASKVPVVAIGGIGLANAHSVMEIGEPNLHGVAVVSALFDRE 479
            +TK NN T+GL GLKTVCSASK+PVVAIGGI  +NA +VME+G PNL GVAVVSALFDRE
Sbjct: 424  NTKANNPTIGLDGLKTVCSASKLPVVAIGGINDSNAGTVMEMGVPNLKGVAVVSALFDRE 483

Query: 478  SVSSETRKLHSVLMDVLS 425
            +V +ET+KLH++LM+  S
Sbjct: 484  NVLAETKKLHALLMEASS 501


>ref|XP_002530677.1| phosphomethylpyrimidine kinase, putative [Ricinus communis]
            gi|223529770|gb|EEF31708.1| phosphomethylpyrimidine
            kinase, putative [Ricinus communis]
          Length = 546

 Score =  548 bits (1412), Expect = e-153
 Identities = 275/378 (72%), Positives = 312/378 (82%)
 Frame = -3

Query: 1558 ADPSILMAFREELLPMADIVTPNLKEASALLGGMKLVTVADMCSAAKSIHDLGPRYVLVK 1379
            A PSI+  FREELLPMA+IVTPN+KEASALLGGM L T+ADM SAAK +H LGP+ VLVK
Sbjct: 162  AGPSIVSCFREELLPMANIVTPNIKEASALLGGMPLETLADMRSAAKLLHALGPQNVLVK 221

Query: 1378 GGDLPAPLDAVDIFFDGDHCHELRASRIQTHNTHGTGCTLASCIAAELAKGSLMLPAVQV 1199
            GGDLP  LDAVDIFFDG+  HELR+SRI+T NTHGTGCTLASCIAAELAKGS ML AV+V
Sbjct: 222  GGDLPDSLDAVDIFFDGEDYHELRSSRIKTRNTHGTGCTLASCIAAELAKGSPMLSAVKV 281

Query: 1198 AKRFVETALDYSKDIVIGSGPQGPFDHLFKLKRSTYNSSRRRGFNPNDLLLYAITDSGMN 1019
            AK ++ETAL+YSKDI IG+G QGPFDHL +LK S  NS R+  FNPN+L LYA+ DS MN
Sbjct: 282  AKCYIETALEYSKDIFIGNGRQGPFDHLLRLKSSVQNSGRQGTFNPNNLFLYAVPDSRMN 341

Query: 1018 KKWARSIIDAVKASIEGGATIIQLREKDAETREFVRLAEACLEICHSHGVALLINDRVDI 839
            K W R ++DA + +IEGGATI+QLREK+ ETR+F+  A+ACLEIC SHGV LLINDRVD+
Sbjct: 342  KMWGRPMVDATREAIEGGATIVQLREKNTETRDFINTAKACLEICRSHGVPLLINDRVDV 401

Query: 838  ALACDADGVHLGQSDMPPRVARTLLGPGKIIGVSCKTPEQALQAWADGADYIGCGGVFPT 659
            ALACDADGVH+GQSD+P R AR LLGP KIIGVSCKTPEQA QAW DGADYIGCGGV+PT
Sbjct: 402  ALACDADGVHVGQSDIPARTARILLGPDKIIGVSCKTPEQAQQAWIDGADYIGCGGVYPT 461

Query: 658  STKENNLTVGLSGLKTVCSASKVPVVAIGGIGLANAHSVMEIGEPNLHGVAVVSALFDRE 479
            +TK NN TVG  GLK VC ASK+PVVAIGGI   NA SVME G  NL GVAVVSALFD+E
Sbjct: 462  TTKANNSTVGFDGLKAVCLASKLPVVAIGGINATNAVSVMESGVANLKGVAVVSALFDKE 521

Query: 478  SVSSETRKLHSVLMDVLS 425
            SV   TR LH++L +  S
Sbjct: 522  SVLDATRNLHAILTEAAS 539


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