BLASTX nr result

ID: Coptis25_contig00014497 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00014497
         (450 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI27491.3| unnamed protein product [Vitis vinifera]              122   2e-26
ref|XP_002311566.1| predicted protein [Populus trichocarpa] gi|2...   118   4e-25
ref|XP_002263192.2| PREDICTED: uncharacterized protein LOC100243...   117   1e-24
ref|XP_002518800.1| conserved hypothetical protein [Ricinus comm...   115   5e-24
ref|XP_003631315.1| PREDICTED: uncharacterized protein LOC100265...   114   8e-24

>emb|CBI27491.3| unnamed protein product [Vitis vinifera]
          Length = 6100

 Score =  122 bits (307), Expect = 2e-26
 Identities = 67/141 (47%), Positives = 88/141 (62%), Gaps = 1/141 (0%)
 Frame = +3

Query: 30   VACAPTNVAIAELSSRVLKLVKEPYELDPGMRNSLYSLGDLLLFGNNEYLQLDGDLKEIF 209
            +ACAPTN+AI E+ SRVLKL +EP+E D G  +   SLGD+LLFGN   L+   D+ E++
Sbjct: 3763 LACAPTNIAITEVVSRVLKLREEPFENDLGANSMFCSLGDILLFGNKSRLKAHSDIVEVY 3822

Query: 210  LDYRVDKLAEFLGR-NSWKYYFMSLIDVLENCVSQYDIFIENXXXXXXXXXXXXXXXRCS 386
            LDYRVD+L E LG    W++ F S+ID LE+CVS Y IF+EN                  
Sbjct: 3823 LDYRVDRLFECLGPVTGWRHRFNSMIDFLEDCVSHYRIFLENESRKEKMDI--------- 3873

Query: 387  GHSFLKFIRERFTEAALPLKR 449
              SF++F R+RF   A PL+R
Sbjct: 3874 --SFIEFARDRFRATAGPLRR 3892


>ref|XP_002311566.1| predicted protein [Populus trichocarpa] gi|222851386|gb|EEE88933.1|
           predicted protein [Populus trichocarpa]
          Length = 1950

 Score =  118 bits (296), Expect = 4e-25
 Identities = 66/152 (43%), Positives = 90/152 (59%), Gaps = 12/152 (7%)
 Frame = +3

Query: 30  VACAPTNVAIAELSSRVLKLVKEPYELDPGMRNSLYSLGDLLLFGNNEYLQLDGDLKEIF 209
           + C PTNV+I E++SRV KLV E +E D G  +  +S+GD+LLFGN + L++D + +E++
Sbjct: 229 LTCGPTNVSITEVASRVFKLVTESHEADSGTDSLFHSVGDILLFGNKDRLKVDSETQEVY 288

Query: 210 LDYRVDKLAE-FLGRNSWKYYFMSLIDVLENCVSQYDIFIENXXXXXXXXXXXXXXXR-- 380
           LDYRV +L E F     W+  F S ID  E+CVSQY IF+EN               R  
Sbjct: 289 LDYRVKRLIECFAPLTGWRNCFNSTIDFFEDCVSQYAIFVENELIKMQEHDDENEEKRES 348

Query: 381 CS---------GHSFLKFIRERFTEAALPLKR 449
           CS           +FL+F+R+RF   ALPLKR
Sbjct: 349 CSYQAVALKGEPKTFLEFMRDRFRSTALPLKR 380


>ref|XP_002263192.2| PREDICTED: uncharacterized protein LOC100243095 [Vitis vinifera]
          Length = 2788

 Score =  117 bits (292), Expect = 1e-24
 Identities = 68/159 (42%), Positives = 90/159 (56%), Gaps = 19/159 (11%)
 Frame = +3

Query: 30  VACAPTNVAIAELSSRVLKLVKEPYELDPGMRNSLYSLGDLLLFGNNEYLQLDGDLKEIF 209
           +ACAPTN+AI E+ SRVLKL +EP+E D G  +   SLGD+LLFGN   L+   D+ E++
Sbjct: 304 LACAPTNIAITEVVSRVLKLREEPFENDLGANSMFCSLGDILLFGNKSRLKAHSDIVEVY 363

Query: 210 LDYRVDKLAEFLGR-NSWKYYFMSLIDVLENCVSQYDIFIENXXXXXXXXXXXXXXXR-- 380
           LDYRVD+L E LG    W++ F S+ID LE+CVS Y IF+EN               +  
Sbjct: 364 LDYRVDRLFECLGPVTGWRHRFNSMIDFLEDCVSHYRIFLENESRKEKSCSNKGGSTKEE 423

Query: 381 -----------CSGH-----SFLKFIRERFTEAALPLKR 449
                      C        SF++F R+RF   A PL+R
Sbjct: 424 VFMKNELSSNECESTKKVDISFIEFARDRFRATAGPLRR 462


>ref|XP_002518800.1| conserved hypothetical protein [Ricinus communis]
           gi|223542181|gb|EEF43725.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 2820

 Score =  115 bits (287), Expect = 5e-24
 Identities = 67/152 (44%), Positives = 86/152 (56%), Gaps = 12/152 (7%)
 Frame = +3

Query: 30  VACAPTNVAIAELSSRVLKLVKEPYELDPGMRNSLYSLGDLLLFGNNEYLQLDGDLKEIF 209
           + CAPTNVAI E+++RVLKLV E      G    +YS+G++LLFGN+E L+LD  ++EI+
Sbjct: 308 LTCAPTNVAIKEVATRVLKLVTESQRTGSGADALIYSVGNILLFGNSERLKLDSAIEEIY 367

Query: 210 LDYRVDKLAE-FLGRNSWKYYFMSLIDVLENCVSQYDIFIENXXXXXXXXXXXXXXXRCS 386
           LDYRV+KL E F     W +   S ID  E+C+SQY IF+EN                  
Sbjct: 368 LDYRVEKLIECFAPLTGWCHCLTSTIDFFEDCISQYFIFLENEMIKEKENNHESKNKEKE 427

Query: 387 -----------GHSFLKFIRERFTEAALPLKR 449
                        SFL+F RERF   ALPLKR
Sbjct: 428 FRNVANVSNQGNKSFLEFARERFLSTALPLKR 459


>ref|XP_003631315.1| PREDICTED: uncharacterized protein LOC100265010 [Vitis vinifera]
          Length = 2792

 Score =  114 bits (285), Expect = 8e-24
 Identities = 68/160 (42%), Positives = 92/160 (57%), Gaps = 20/160 (12%)
 Frame = +3

Query: 30  VACAPTNVAIAELSSRVLKLVKEPYELDPGMRNSLY-SLGDLLLFGNNEYLQLDGDLKEI 206
           +ACAPTNVA+ E++SRVLKL KE +E      NSL+ SLGD+L+FGN + L++  D+ E+
Sbjct: 302 LACAPTNVAVTEVASRVLKLTKESFE------NSLFCSLGDILIFGNKDRLKVGADIVEV 355

Query: 207 FLDYRVDKLAEFLG-RNSWKYYFMSLIDVLENCVSQYDIFIENXXXXXXXXXXXXXXXR- 380
           +LDYRVD+L E  G    W+Y F S+ID LE+CVS Y IF+EN               + 
Sbjct: 356 YLDYRVDRLIECFGPLTGWRYCFNSMIDFLEDCVSHYHIFLENELRKEKSCSNEGGSTKE 415

Query: 381 ------------CSG-----HSFLKFIRERFTEAALPLKR 449
                       C        SF++F R+RF   A PL+R
Sbjct: 416 EVFMKNELSSNECGSSKKVDKSFIEFARDRFKATAGPLRR 455


Top