BLASTX nr result

ID: Coptis25_contig00014485 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00014485
         (892 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002515849.1| Bystin, putative [Ricinus communis] gi|22354...   256   6e-66
gb|ABK93690.1| unknown [Populus trichocarpa]                          254   2e-65
ref|XP_002330743.1| predicted protein [Populus trichocarpa] gi|2...   254   2e-65
ref|XP_002272540.1| PREDICTED: bystin-like [Vitis vinifera]           251   2e-64
ref|XP_003580837.1| PREDICTED: bystin-like [Brachypodium distach...   250   3e-64

>ref|XP_002515849.1| Bystin, putative [Ricinus communis] gi|223545004|gb|EEF46518.1|
           Bystin, putative [Ricinus communis]
          Length = 448

 Score =  256 bits (653), Expect = 6e-66
 Identities = 125/166 (75%), Positives = 143/166 (86%), Gaps = 1/166 (0%)
 Frame = -3

Query: 890 SGTCNLREAVIIGSVIQKNSISPLHAGAALCTLADMEYCGTTSYFIKILLDKKYALPYRV 711
           SGTCNLREAVI+GS++QK SI  LH+  AL  LA+MEYCGTTSYFIK+L++KKYALPYRV
Sbjct: 283 SGTCNLREAVIVGSIVQKVSIPMLHSSVALLKLAEMEYCGTTSYFIKLLVEKKYALPYRV 342

Query: 710 LDAVVAHFMRFLDDQRVMPVIWHQSLLTFVQRYKNEITKEDKDNLDCLLQHQKHYLVTSE 531
           +DAVV+H+M+FLDD R+MPVIWHQSLL FVQRYKNE+ KEDKDNL  L+  QKH LVT E
Sbjct: 343 VDAVVSHYMKFLDDTRIMPVIWHQSLLAFVQRYKNELQKEDKDNLRTLVGKQKHKLVTPE 402

Query: 530 IKRELKNSRNRGEKEDPMSIISP-AVITRTIEEDRFDFPDVPMEED 396
           I REL NSRNRGEK+DPMSI SP +VI + IEEDRFD PDVPMEED
Sbjct: 403 IVRELDNSRNRGEKDDPMSITSPVSVINKVIEEDRFDIPDVPMEED 448


>gb|ABK93690.1| unknown [Populus trichocarpa]
          Length = 443

 Score =  254 bits (649), Expect = 2e-65
 Identities = 127/166 (76%), Positives = 144/166 (86%), Gaps = 1/166 (0%)
 Frame = -3

Query: 890 SGTCNLREAVIIGSVIQKNSISPLHAGAALCTLADMEYCGTTSYFIKILLDKKYALPYRV 711
           SGTC LREAVI+GS+IQK SI  LH+  A+  LA+MEYCGTTSYFIK+LLDKKYALP+RV
Sbjct: 278 SGTCTLREAVIVGSIIQKVSIPMLHSCVAVLKLAEMEYCGTTSYFIKLLLDKKYALPFRV 337

Query: 710 LDAVVAHFMRFLDDQRVMPVIWHQSLLTFVQRYKNEITKEDKDNLDCLLQHQKHYLVTSE 531
           LDAVVAHFMRFL+D R+MPVIWHQSLL+FVQRYKNE+ KEDKDNL  L+  QKH LV+ E
Sbjct: 338 LDAVVAHFMRFLEDTRIMPVIWHQSLLSFVQRYKNELQKEDKDNLRRLVLRQKHKLVSPE 397

Query: 530 IKRELKNSRNRGEKEDPMSIISP-AVITRTIEEDRFDFPDVPMEED 396
           I REL NSRNRGEK+DPMSI SP +VI +TIEEDRFD P+VPMEED
Sbjct: 398 IIRELDNSRNRGEKDDPMSITSPVSVINKTIEEDRFDIPEVPMEED 443


>ref|XP_002330743.1| predicted protein [Populus trichocarpa] gi|222872519|gb|EEF09650.1|
           predicted protein [Populus trichocarpa]
          Length = 443

 Score =  254 bits (648), Expect = 2e-65
 Identities = 126/166 (75%), Positives = 144/166 (86%), Gaps = 1/166 (0%)
 Frame = -3

Query: 890 SGTCNLREAVIIGSVIQKNSISPLHAGAALCTLADMEYCGTTSYFIKILLDKKYALPYRV 711
           SGTC LREAV++GS+IQK SI  LH+  A+  LA+MEYCGTTSYFIK+LLDKKYALP+RV
Sbjct: 278 SGTCTLREAVVVGSIIQKVSIPMLHSCVAVLKLAEMEYCGTTSYFIKLLLDKKYALPFRV 337

Query: 710 LDAVVAHFMRFLDDQRVMPVIWHQSLLTFVQRYKNEITKEDKDNLDCLLQHQKHYLVTSE 531
           LDAVVAHFMRFL+D R+MPVIWHQSLL+FVQRYKNE+ KEDKDNL  L+  QKH LV+ E
Sbjct: 338 LDAVVAHFMRFLEDTRIMPVIWHQSLLSFVQRYKNELQKEDKDNLRRLVLRQKHKLVSPE 397

Query: 530 IKRELKNSRNRGEKEDPMSIISP-AVITRTIEEDRFDFPDVPMEED 396
           I REL NSRNRGEK+DPMSI SP +VI +TIEEDRFD P+VPMEED
Sbjct: 398 IIRELDNSRNRGEKDDPMSITSPVSVINKTIEEDRFDIPEVPMEED 443


>ref|XP_002272540.1| PREDICTED: bystin-like [Vitis vinifera]
          Length = 440

 Score =  251 bits (641), Expect = 2e-64
 Identities = 122/167 (73%), Positives = 143/167 (85%), Gaps = 2/167 (1%)
 Frame = -3

Query: 890 SGTCNLREAVIIGSVIQKNSISPLHAGAALCTLADMEYCGTTSYFIKILLDKKYALPYRV 711
           SGTCNLREAVIIGS+I+K SI  LH+  AL  LA+MEYCGTTSYFIKILLDKKYALPYR 
Sbjct: 274 SGTCNLREAVIIGSIIEKVSIPALHSSVALLKLAEMEYCGTTSYFIKILLDKKYALPYRA 333

Query: 710 LDAVVAHFMRFLDDQRVMPVIWHQSLLTFVQRYKNEITKEDKDNLDCLLQHQKHYLVTSE 531
           +DAV AHF++F++D R+MPVIWHQSLLTFVQRYKN++ KEDKD+L  L+++Q+H LVT E
Sbjct: 334 VDAVAAHFIKFIEDTRIMPVIWHQSLLTFVQRYKNQLRKEDKDSLKTLIENQRHKLVTPE 393

Query: 530 IKRELKNSRNRGEKEDPMSIISP--AVITRTIEEDRFDFPDVPMEED 396
           I REL NSRNRGEKED + +IS   +VI +TIEEDRFD PDVPMEED
Sbjct: 394 ISRELNNSRNRGEKEDDLMLISSPISVINKTIEEDRFDIPDVPMEED 440


>ref|XP_003580837.1| PREDICTED: bystin-like [Brachypodium distachyon]
          Length = 461

 Score =  250 bits (639), Expect = 3e-64
 Identities = 125/165 (75%), Positives = 140/165 (84%), Gaps = 1/165 (0%)
 Frame = -3

Query: 887 GTCNLREAVIIGSVIQKNSISPLHAGAALCTLADMEYCGTTSYFIKILLDKKYALPYRVL 708
           G C LREAVIIGS+IQK +I PLHA AAL  LADMEYCGTTSYFIK+ LDKKYALPYRVL
Sbjct: 297 GNCTLREAVIIGSIIQKVTIPPLHASAALMKLADMEYCGTTSYFIKLFLDKKYALPYRVL 356

Query: 707 DAVVAHFMRFLDDQRVMPVIWHQSLLTFVQRYKNEITKEDKDNLDCLLQHQKHYLVTSEI 528
           DAV AHFMRFLDD+R MPVIWHQSLL FV+RYKNE+ K+DK+ L  LL HQKHYLVT EI
Sbjct: 357 DAVFAHFMRFLDDERNMPVIWHQSLLAFVERYKNELEKKDKEKLVRLLDHQKHYLVTPEI 416

Query: 527 KRELKNSRNRGEKEDPMSIISP-AVITRTIEEDRFDFPDVPMEED 396
           +REL++S NRGEK   MSI SP +VIT+ IEEDR+D P+VPMEED
Sbjct: 417 RRELRSSANRGEKATDMSICSPVSVITKPIEEDRWDVPEVPMEED 461


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