BLASTX nr result

ID: Coptis25_contig00014484 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00014484
         (1050 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI22601.3| unnamed protein product [Vitis vinifera]              167   3e-39
ref|XP_002278076.1| PREDICTED: probable membrane-associated kina...   167   3e-39
ref|XP_002513621.1| conserved hypothetical protein [Ricinus comm...   167   5e-39
ref|XP_002318354.1| predicted protein [Populus trichocarpa] gi|2...   161   2e-37
ref|XP_003533963.1| PREDICTED: probable membrane-associated kina...   161   3e-37

>emb|CBI22601.3| unnamed protein product [Vitis vinifera]
          Length = 601

 Score =  167 bits (424), Expect = 3e-39
 Identities = 102/222 (45%), Positives = 136/222 (61%), Gaps = 12/222 (5%)
 Frame = +1

Query: 19   METSSPLSIESFSFKWVVNLKLSFDGLDDSFRASLEASDEAAFIEMDPKMAITSKTSLGD 198
            ME S PLSIESFS+ W++NLK SF+ LDDS R SL+ SDEA+FIEMDP+M   SK    +
Sbjct: 381  MEASQPLSIESFSYSWLINLKPSFESLDDSLRTSLDVSDEASFIEMDPRMP-PSKRFFRN 439

Query: 199  TQDFNFS--SSQFPPLLVHADEVFSNGLLVPYFLTPSKEHTSDSVPTLP----TSLESCR 360
            +QDFNF    SQ P  LVHADE+FSNGL++P F+ P K    D   +LP    +S  + +
Sbjct: 440  SQDFNFDFPISQPPLSLVHADELFSNGLIMPIFMEPLKMEAYDGSYSLPATPISSSHAPK 499

Query: 361  LLLPKNRIHRSFIHNCWSSCRRILKKHLCFSKKPSKRVRDSSSTTRTQTIDARTE----F 528
             +L     H S +  C    ++IL+K+L F +   +R+R     +R +++++R +    +
Sbjct: 500  HVLSATNTHCSSLRRCRRLSKQILQKYLDFLRPLYRRIRGRRIGSRAESVNSRMQEGKSW 559

Query: 529  DASKGTSPRTSTDYLIRDW--SHDIEMSIQEAVLHCKRSFEK 648
              S   SPRTST Y   DW  S D E SI EAVLHCKRS  K
Sbjct: 560  VYSPEASPRTSTAYSTGDWRKSCDSESSIYEAVLHCKRSIGK 601


>ref|XP_002278076.1| PREDICTED: probable membrane-associated kinase regulator 6-like
           [Vitis vinifera]
          Length = 221

 Score =  167 bits (424), Expect = 3e-39
 Identities = 102/222 (45%), Positives = 136/222 (61%), Gaps = 12/222 (5%)
 Frame = +1

Query: 19  METSSPLSIESFSFKWVVNLKLSFDGLDDSFRASLEASDEAAFIEMDPKMAITSKTSLGD 198
           ME S PLSIESFS+ W++NLK SF+ LDDS R SL+ SDEA+FIEMDP+M   SK    +
Sbjct: 1   MEASQPLSIESFSYSWLINLKPSFESLDDSLRTSLDVSDEASFIEMDPRMP-PSKRFFRN 59

Query: 199 TQDFNFS--SSQFPPLLVHADEVFSNGLLVPYFLTPSKEHTSDSVPTLP----TSLESCR 360
           +QDFNF    SQ P  LVHADE+FSNGL++P F+ P K    D   +LP    +S  + +
Sbjct: 60  SQDFNFDFPISQPPLSLVHADELFSNGLIMPIFMEPLKMEAYDGSYSLPATPISSSHAPK 119

Query: 361 LLLPKNRIHRSFIHNCWSSCRRILKKHLCFSKKPSKRVRDSSSTTRTQTIDARTE----F 528
            +L     H S +  C    ++IL+K+L F +   +R+R     +R +++++R +    +
Sbjct: 120 HVLSATNTHCSSLRRCRRLSKQILQKYLDFLRPLYRRIRGRRIGSRAESVNSRMQEGKSW 179

Query: 529 DASKGTSPRTSTDYLIRDW--SHDIEMSIQEAVLHCKRSFEK 648
             S   SPRTST Y   DW  S D E SI EAVLHCKRS  K
Sbjct: 180 VYSPEASPRTSTAYSTGDWRKSCDSESSIYEAVLHCKRSIGK 221


>ref|XP_002513621.1| conserved hypothetical protein [Ricinus communis]
           gi|223547529|gb|EEF49024.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 220

 Score =  167 bits (422), Expect = 5e-39
 Identities = 98/221 (44%), Positives = 137/221 (61%), Gaps = 11/221 (4%)
 Frame = +1

Query: 19  METSSPLSIESFSFKWVVNLKLSFDGLDDSFRASLEASDEAAFIEMDPKMAITSKTSLGD 198
           METS PLSIESFS+ W+VNLK S + LD S RASL+ASDEA+FIEMDP+M   SK    +
Sbjct: 1   METSQPLSIESFSYSWLVNLKPSLESLDSSLRASLDASDEASFIEMDPRMP-PSKRFFRN 59

Query: 199 TQD--FNFSSSQFPPLLVHADEVFSNGLLVPYFLTPSK---EHTSDSVPTLPTSLESCRL 363
           +QD  F+F +SQ P  +VHADE+FSNG ++P F+ P K      SDS   LP S  + ++
Sbjct: 60  SQDFKFDFPTSQSPLTVVHADELFSNGYVMPIFVDPLKIESYEVSDSASALPASSHAPKV 119

Query: 364 LLPKNRIHRSFIHNCWSSCRRILKKHLCFSKKPSKRVRDSSSTTRTQTIDARTE----FD 531
           ++   +   S +  C +  +++ +K+  F +   +R+R   S+TR + +D + +    + 
Sbjct: 120 VVSGRKTRCSSLRRCRTLSKQMFQKYFDFLRPLYRRIRGHRSSTRAEKMDTKVQVMKRWM 179

Query: 532 ASKGTSPRTSTDYLIRDW--SHDIEMSIQEAVLHCKRSFEK 648
            S   SPR S  Y + DW  S D E SI EAVLHCK+S EK
Sbjct: 180 YSAEASPRISVAYSVDDWRRSCDSESSIYEAVLHCKKSIEK 220


>ref|XP_002318354.1| predicted protein [Populus trichocarpa] gi|222859027|gb|EEE96574.1|
           predicted protein [Populus trichocarpa]
          Length = 222

 Score =  161 bits (408), Expect = 2e-37
 Identities = 102/220 (46%), Positives = 139/220 (63%), Gaps = 13/220 (5%)
 Frame = +1

Query: 19  METSSPLSIESFSFKWVVNLKLSFDGLDDSFRASLEASDEAAFIEMDPKMAITSKTSLGD 198
           METS PLSIESFS+ W+VNLK S + LD+S RASL+ASDEA+FIEMDP+M   SK    +
Sbjct: 1   METSQPLSIESFSYSWLVNLKPSLESLDNSLRASLDASDEASFIEMDPRMP-PSKRFFRN 59

Query: 199 TQD--FNFSSSQFPPLLVHADEVFSNGLLVPYFLTPSKEH---TSDSVPTLPTSLESCRL 363
           +QD  F+F  SQ P  LVHADE+FSNG ++P F+ P K      SDS   LPTS  + + 
Sbjct: 60  SQDFKFDFPISQSPLTLVHADELFSNGYVMPLFVDPLKMEAYDVSDSTSALPTSSHAPKT 119

Query: 364 LLPKNRIHR-SFIHNCWSSCRRILKKHLCFSKKPSKRVRDSSSTTRTQTIDARTE----F 528
           ++   +  R S +  C    ++I++K++ F +   +R+R   S++R + ID++ +    +
Sbjct: 120 VVSACKPQRCSSLRRCRRLSKQIVQKYMDFLRPLYRRIRGHRSSSRDENIDSKVQVMKNW 179

Query: 529 DASKGTSPRTSTDYLIRD-W--SHDIEMSIQEAVLHCKRS 639
             S  TSPR S  Y + D W  S D E SI EAVLHCKRS
Sbjct: 180 VYSAETSPRISVAYSVDDCWRRSCDSESSIYEAVLHCKRS 219


>ref|XP_003533963.1| PREDICTED: probable membrane-associated kinase regulator 6-like
           [Glycine max]
          Length = 223

 Score =  161 bits (407), Expect = 3e-37
 Identities = 102/222 (45%), Positives = 134/222 (60%), Gaps = 12/222 (5%)
 Frame = +1

Query: 19  METSSPLSIESFSFKWVVNLKLSFDGLDDSFRASLEASDEA-AFIEMDPKMAITSKTSLG 195
           M+TS PLSIESFS+ W+VNLK S + LD S R SL+ASDEA +FIEMDP+M   SK    
Sbjct: 1   MDTSHPLSIESFSYSWLVNLKPSLESLDGSLRTSLDASDEASSFIEMDPRMP-PSKRFFR 59

Query: 196 DTQD--FNFSSSQFPPLLVHADEVFSNGLLVPYFLTPSKE---HTSDSVPTLPTSLESCR 360
           ++QD  F+F  SQ P  LV ADE+FSNG L+P F+   K      SD+ PTLP+S    +
Sbjct: 60  NSQDFKFDFPISQSPLTLVDADELFSNGYLMPLFVESLKMEAFEASDANPTLPSSSHVPK 119

Query: 361 LLLPKNRIHRSFIHNCWSSCRRILKKHLCFSKKPSKRVRDSSSTTRTQTIDARTEFDASK 540
             +P        +  C +  RRI +K+L F +   +R+R   S ++ +++  RTE   ++
Sbjct: 120 SAVPNGHSRCPSLKRCRTLSRRIFRKYLNFLRPLCRRLRSGKSGSKPESVVKRTESAKNR 179

Query: 541 G----TSPRTSTDYLIRDW--SHDIEMSIQEAVLHCKRSFEK 648
           G    TSPR S  Y   DW  S D E SI EAVLHCKRS E+
Sbjct: 180 GYYSETSPRISVAYSADDWRKSCDSESSIYEAVLHCKRSIER 221


Top