BLASTX nr result

ID: Coptis25_contig00014483 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00014483
         (1043 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265574.1| PREDICTED: cell division topological specifi...   300   4e-79
ref|XP_002512131.1| conserved hypothetical protein [Ricinus comm...   283   5e-74
emb|CAN67389.1| hypothetical protein VITISV_034714 [Vitis vinifera]   282   1e-73
ref|XP_002278852.2| PREDICTED: cell division topological specifi...   280   3e-73
gb|AFC37489.1| MinE protein [Manihot esculenta]                       280   4e-73

>ref|XP_002265574.1| PREDICTED: cell division topological specificity factor homolog,
           chloroplastic [Vitis vinifera]
           gi|296088282|emb|CBI36508.3| unnamed protein product
           [Vitis vinifera]
          Length = 225

 Score =  300 bits (768), Expect = 4e-79
 Identities = 150/228 (65%), Positives = 187/228 (82%)
 Frame = +1

Query: 124 MAISGDLRVCATMASYPTNPVRRYFPPSKVGFNSFQTGGSSVSEVMHKWPRIELDDHSMR 303
           MA+SGDLRV AT++SYPT+P+R     SKVGF     G SS+ ++  +WP + L+ H + 
Sbjct: 1   MAVSGDLRVVATLSSYPTHPLRSSLLSSKVGFAGALNGESSIPDITPRWPSLVLNGHPVH 60

Query: 304 CESQRSWSFGIIGDNQISAKPVNEETEGLLLSAINMSFLERLDLAWKILFPPPATVRNSN 483
           C S+R   FGI+GDN++S + +++E E LLL+AINM+FLERL+LAWKI+FPP  T R+SN
Sbjct: 61  CHSKRI--FGIMGDNKLSPRSISQEAESLLLNAINMNFLERLNLAWKIIFPPQKT-RHSN 117

Query: 484 ARIAKQRLKMILFSDRCAVSDEAKQKIVSNVVGALSDFVEIESRDKVHLSVSTDPDLGTI 663
           ARIAKQRL+MILFSDRCAVSDEAKQKIV+N+V ALSDFVEIES+DKV LSVSTDP+LGT+
Sbjct: 118 ARIAKQRLQMILFSDRCAVSDEAKQKIVNNIVHALSDFVEIESQDKVQLSVSTDPNLGTV 177

Query: 664 YSVTVPVRRVKSKYQVEDESGMITNVEYKDTGDSSGTVDVKFDFFVPT 807
           YSVTVPVRRVK +YQ  DE G I N+EYKD GDSSG+VDV+FDF +P+
Sbjct: 178 YSVTVPVRRVKPEYQAVDEMGTIANIEYKDNGDSSGSVDVRFDFVIPS 225


>ref|XP_002512131.1| conserved hypothetical protein [Ricinus communis]
           gi|223549311|gb|EEF50800.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 232

 Score =  283 bits (724), Expect = 5e-74
 Identities = 150/234 (64%), Positives = 179/234 (76%), Gaps = 2/234 (0%)
 Frame = +1

Query: 124 MAISGDLRVCATMASYPTNPVRRYFPPS--KVGFNSFQTGGSSVSEVMHKWPRIELDDHS 297
           MAISGDLRV AT+ SY  +P R  FP S  KV F  F  GGS  S  +HKWP I +D   
Sbjct: 1   MAISGDLRVSATLTSYHKHPFRSSFPSSNSKVEFTGFPGGGSVTSPNVHKWPSIMVDRCK 60

Query: 298 MRCESQRSWSFGIIGDNQISAKPVNEETEGLLLSAINMSFLERLDLAWKILFPPPATVRN 477
           M   S+R    GI GD Q+S+  + EE E  LL+AINMSF ERL+LAWKI+FP PA  ++
Sbjct: 61  MHDHSRRF--SGITGDYQLSSTSIGEEAESFLLNAINMSFFERLNLAWKIIFPSPARRKS 118

Query: 478 SNARIAKQRLKMILFSDRCAVSDEAKQKIVSNVVGALSDFVEIESRDKVHLSVSTDPDLG 657
           SNAR+AKQRLKMILFSDRCAVSDEAK+KIVSN+V ALS+FV IES+DKV LSV+ D DLG
Sbjct: 119 SNARVAKQRLKMILFSDRCAVSDEAKRKIVSNIVHALSEFVVIESQDKVQLSVTADSDLG 178

Query: 658 TIYSVTVPVRRVKSKYQVEDESGMITNVEYKDTGDSSGTVDVKFDFFVPTE*SQ 819
           T+YSVTVPVRRV+ +YQ  +E G ITN+EYKDTG+SSG+VDV+FDFF+P E S+
Sbjct: 179 TVYSVTVPVRRVRPEYQDAEEIGSITNIEYKDTGESSGSVDVRFDFFIPDERSR 232


>emb|CAN67389.1| hypothetical protein VITISV_034714 [Vitis vinifera]
          Length = 530

 Score =  282 bits (721), Expect = 1e-73
 Identities = 147/238 (61%), Positives = 182/238 (76%), Gaps = 15/238 (6%)
 Frame = +1

Query: 124 MAISGDLRVCATMASYPTNPVRRYFPPSK---------------VGFNSFQTGGSSVSEV 258
           MA+SGDLRV AT++SYPT+P+R     SK               VGF     G SS+ ++
Sbjct: 1   MAVSGDLRVVATLSSYPTHPLRSSLLSSKAKSDKRIIEVDWLVKVGFAGALNGESSIPDI 60

Query: 259 MHKWPRIELDDHSMRCESQRSWSFGIIGDNQISAKPVNEETEGLLLSAINMSFLERLDLA 438
             +WP + L+ H + C S+R   FGI+GDN++S + +++E E LLL+AINM+FLERL+LA
Sbjct: 61  TPRWPSLVLNGHPVHCHSKRI--FGIMGDNKLSPRSISQEAESLLLNAINMNFLERLNLA 118

Query: 439 WKILFPPPATVRNSNARIAKQRLKMILFSDRCAVSDEAKQKIVSNVVGALSDFVEIESRD 618
           WKI+FPP  T R+SNARIAKQRL+MILFSDRCAVSDEAKQKIV+N+V ALSDFVEIES+D
Sbjct: 119 WKIIFPPQKT-RHSNARIAKQRLQMILFSDRCAVSDEAKQKIVNNIVHALSDFVEIESQD 177

Query: 619 KVHLSVSTDPDLGTIYSVTVPVRRVKSKYQVEDESGMITNVEYKDTGDSSGTVDVKFD 792
           KV LSVSTDP+LGT+YSVTVPVRRVK +YQ  DE G I N+EYKD GDSSG+VDV+ D
Sbjct: 178 KVQLSVSTDPNLGTVYSVTVPVRRVKPEYQAADEMGTIANIEYKDNGDSSGSVDVRLD 235


>ref|XP_002278852.2| PREDICTED: cell division topological specificity factor homolog,
           chloroplastic-like [Vitis vinifera]
           gi|296082964|emb|CBI22265.3| unnamed protein product
           [Vitis vinifera]
          Length = 233

 Score =  280 bits (717), Expect = 3e-73
 Identities = 146/235 (62%), Positives = 176/235 (74%), Gaps = 3/235 (1%)
 Frame = +1

Query: 124 MAISGDLRVCATMASYP-TNPVRRYFPPSKVGFNSFQTGGSSVSEVMHKWPRIELDDHSM 300
           MAI GDLRV A    +   +P     PPSKV F  F  GGS  SE+M KW  +E++ +  
Sbjct: 1   MAICGDLRVSAAPMGFRFKHPFGASLPPSKVRFKHFTNGGSDSSEIMPKWSCMEMERYKT 60

Query: 301 RCESQRSWSFGIIGDNQISAKPVNEETEGLLLSAINMSFLERLDLAWKILFPPPATVRNS 480
            C   +   FG+ G N++  +P+ ++ EG L    +MSF ERL+LAWKILFP P T RNS
Sbjct: 61  WCHYNQP--FGVTGANRLPMEPITQDAEGFLHKMTSMSFFERLNLAWKILFPSPTTRRNS 118

Query: 481 NARIAKQRLKMILFSDRCAVSDEAKQKIVSNVVGALSDFVEIESRDKVHLSVSTDPDLGT 660
           NARIAKQRLKMILFSDRC VSD+AKQKIVSN+VGALS+FVEI+S+DKVHL+VSTDPDLGT
Sbjct: 119 NARIAKQRLKMILFSDRCVVSDDAKQKIVSNIVGALSEFVEIDSQDKVHLNVSTDPDLGT 178

Query: 661 IYSVTVPVRRVKSKYQ--VEDESGMITNVEYKDTGDSSGTVDVKFDFFVPTE*SQ 819
           +YS+TVPVRRVKSKYQ   EDE  +ITN+EYKDTG+ S +VDV+FDFFVP E SQ
Sbjct: 179 VYSITVPVRRVKSKYQDEDEDEDRIITNIEYKDTGERSDSVDVRFDFFVPNENSQ 233


>gb|AFC37489.1| MinE protein [Manihot esculenta]
          Length = 232

 Score =  280 bits (716), Expect = 4e-73
 Identities = 149/231 (64%), Positives = 178/231 (77%), Gaps = 2/231 (0%)
 Frame = +1

Query: 124 MAISGDLRVCATMASYPTNPVRRYFPPS--KVGFNSFQTGGSSVSEVMHKWPRIELDDHS 297
           MAISGDLRV AT+ASY  +P+R   P S  KV F  F   GS  S   HKWP I LD + 
Sbjct: 1   MAISGDLRVSATLASYHKHPLRSSLPTSNSKVEFIGFPGRGSGASPNRHKWPGIMLDRYK 60

Query: 298 MRCESQRSWSFGIIGDNQISAKPVNEETEGLLLSAINMSFLERLDLAWKILFPPPATVRN 477
           M+  S+R    GI GD Q+S+  + ++ E  LL+AINMSF ERL+LAWKI+FP PA  ++
Sbjct: 61  MQDHSRRF--SGISGDYQLSSTSIRDDAESFLLNAINMSFPERLNLAWKIIFPSPARRKS 118

Query: 478 SNARIAKQRLKMILFSDRCAVSDEAKQKIVSNVVGALSDFVEIESRDKVHLSVSTDPDLG 657
           SNARIAKQRLKMILFSDRCAVSDEAKQKIV NVV ALS+FVEI+S DKV LSV+ D DLG
Sbjct: 119 SNARIAKQRLKMILFSDRCAVSDEAKQKIVRNVVHALSEFVEIDSEDKVQLSVTADLDLG 178

Query: 658 TIYSVTVPVRRVKSKYQVEDESGMITNVEYKDTGDSSGTVDVKFDFFVPTE 810
           T+YSVTVPVRRV+ +YQ  +E+G ITN+EYKDTGD+SG+VDV+FDFF+P E
Sbjct: 179 TVYSVTVPVRRVRPEYQDAEETGSITNIEYKDTGDTSGSVDVRFDFFIPDE 229


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